* installing *source* package ‘rem’ ...
** package ‘rem’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C compiler: ‘gcc-13 (GCC) 13.2.0’
using C++ compiler: ‘g++-13 (GCC) 13.2.0’
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/rem/src'
g++-13 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection   -c RcppExports.cpp -o RcppExports.o
gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes  -c registerDynamicSymbol.c -o registerDynamicSymbol.o
g++-13 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection   -c rem.cpp -o rem.o
rem.cpp: In function 'double fourCycleCpp(std::vector<std::__cxx11::basic_string<char> >, std::string, std::vector<std::__cxx11::basic_string<char> >, std::string, std::vector<std::__cxx11::basic_string<char> >, std::string, Rcpp::NumericVector, double, Rcpp::NumericVector, double, std::vector<std::__cxx11::basic_string<char> >, std::string, std::vector<std::__cxx11::basic_string<char> >, std::string, std::vector<std::__cxx11::basic_string<char> >, std::string, std::string, std::vector<std::__cxx11::basic_string<char> >, std::vector<std::__cxx11::basic_string<char> >, int, int)':
rem.cpp:69:25: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::__cxx11::basic_string<char> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
   69 |       for (int m = 0; m < x.size(); m++ ) {
      |                       ~~^~~~~~~~~~
rem.cpp:133:29: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::__cxx11::basic_string<char> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
  133 |           for (int p = 0; p < wy.size(); p++) {
      |                           ~~^~~~~~~~~~~
rem.cpp:165:29: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::__cxx11::basic_string<char> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
  165 |           for (int p = 0; p < wy.size(); p++) {
      |                           ~~^~~~~~~~~~~
rem.cpp:213:29: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::__cxx11::basic_string<char> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
  213 |           for (int p = 0; p < wy.size(); p++) {
      |                           ~~^~~~~~~~~~~
rem.cpp: In function 'double similarityTotalAverageCpp(std::vector<std::__cxx11::basic_string<char> >, std::string, std::vector<std::__cxx11::basic_string<char> >, std::string, Rcpp::NumericVector, double, std::vector<std::__cxx11::basic_string<char> >, std::string, std::vector<std::__cxx11::basic_string<char> >, std::string, std::string, std::string, std::string, std::vector<std::__cxx11::basic_string<char> >, std::vector<std::__cxx11::basic_string<char> >, int, int)':
rem.cpp:317:23: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::__cxx11::basic_string<char> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
  317 |     for (int k = 0; k < v.size(); k++){
      |                     ~~^~~~~~~~~~
rem.cpp:357:31: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::__cxx11::basic_string<char> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
  357 |             for (int m = 0; m < xw.size(); m++) {
      |                             ~~^~~~~~~~~~~
rem.cpp: In function 'double similaritySimpleCpp(std::vector<std::__cxx11::basic_string<char> >, std::string, std::vector<std::__cxx11::basic_string<char> >, std::string, Rcpp::NumericVector, double, double, std::vector<std::__cxx11::basic_string<char> >, std::string, std::vector<std::__cxx11::basic_string<char> >, std::string, std::string, std::string, std::vector<std::__cxx11::basic_string<char> >, std::vector<std::__cxx11::basic_string<char> >, int, int)':
rem.cpp:470:21: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::__cxx11::basic_string<char> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
  470 |   for (int k = 0; k < v.size(); k++){
      |                   ~~^~~~~~~~~~
rem.cpp:513:29: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::__cxx11::basic_string<char> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
  513 |           for (int m = 0; m < xw.size(); m++) {
      |                           ~~^~~~~~~~~~~
rem.cpp: In function 'double similarityComplexCpp(std::vector<std::__cxx11::basic_string<char> >, std::string, std::vector<std::__cxx11::basic_string<char> >, std::string, Rcpp::NumericVector, double, double, double, std::vector<std::__cxx11::basic_string<char> >, std::string, std::vector<std::__cxx11::basic_string<char> >, std::string, std::string, std::string, std::vector<std::__cxx11::basic_string<char> >, std::vector<std::__cxx11::basic_string<char> >, int, int)':
rem.cpp:667:23: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::__cxx11::basic_string<char> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
  667 |     for (int k = 0; k < v.size(); k++){
      |                     ~~^~~~~~~~~~
rem.cpp:707:31: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::__cxx11::basic_string<char> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
  707 |             for (int m = 0; m < xw.size(); m++) {
      |                             ~~^~~~~~~~~~~
rem.cpp:755:29: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<double>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
  755 |           for (int p = 0; p < i_positive.size(); p++){
      |                           ~~^~~~~~~~~~~~~~~~~~~
rem.cpp:762:29: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<double>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
  762 |           for (int p = 0; p < i_negative.size(); p++){
      |                           ~~^~~~~~~~~~~~~~~~~~~
rem.cpp:769:29: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<double>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
  769 |           for (int p = 0; p < a_positive.size(); p++){
      |                           ~~^~~~~~~~~~~~~~~~~~~
rem.cpp:776:29: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<double>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
  776 |           for (int p = 0; p < a_negative.size(); p++){
      |                           ~~^~~~~~~~~~~~~~~~~~~
rem.cpp:789:36: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::__cxx11::basic_string<char> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
  789 |                  for (int m = 0; m < xw.size(); m++) {
      |                                  ~~^~~~~~~~~~~
rem.cpp:818:34: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<double>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
  818 |                for (int p = 0; p < i_negative.size(); p++){
      |                                ~~^~~~~~~~~~~~~~~~~~~
rem.cpp:825:34: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<double>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
  825 |                for (int p = 0; p < a_positive.size(); p++){
      |                                ~~^~~~~~~~~~~~~~~~~~~
rem.cpp: In function 'double triadCpp(std::vector<std::__cxx11::basic_string<char> >, std::vector<std::__cxx11::basic_string<char> >, std::vector<std::__cxx11::basic_string<char> >, Rcpp::NumericVector, Rcpp::NumericVector, std::vector<std::__cxx11::basic_string<char> >, std::string, std::string, std::vector<std::__cxx11::basic_string<char> >, std::string, std::vector<std::__cxx11::basic_string<char> >, std::string, double, int, std::string, std::string, double)':
rem.cpp:922:27: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::__cxx11::basic_string<char> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
  922 |         for (int j = 0; j < v.size(); j++) {
      |                         ~~^~~~~~~~~~
rem.cpp: In function 'Rcpp::DataFrame createNullEvents(std::vector<std::__cxx11::basic_string<char> >, std::vector<std::__cxx11::basic_string<char> >, std::vector<std::__cxx11::basic_string<char> >, std::vector<std::__cxx11::basic_string<char> >, std::vector<double>, std::vector<double>, std::vector<double>, std::vector<double>)':
rem.cpp:1000:21: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::__cxx11::basic_string<char> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
 1000 |   for (int i = 0; i < sender.size(); i++){
      |                   ~~^~~~~~~~~~~~~~~
rem.cpp:1003:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<double>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
 1003 |     for(int w = 0; w < allEventTimes.size(); w++){
      |                    ~~^~~~~~~~~~~~~~~~~~~~~~
g++-13 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection   -c temp.cpp -o temp.o
g++-13 -std=gnu++17 -shared -L/usr/local/gcc13/lib64 -L/usr/local/lib64 -o rem.so RcppExports.o registerDynamicSymbol.o rem.o temp.o
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/rem/src'
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/rem/src'
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/rem/src'
installing to /data/gannet/ripley/R/packages/tests-devel/rem.Rcheck/00LOCK-rem/00new/rem/libs
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (rem)