* installing *source* package ‘randomForestRHF’ ...
** this is package ‘randomForestRHF’ version ‘1.0.0’
** package ‘randomForestRHF’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C compiler: ‘gcc (GCC) 15.2.1 20260123 (Red Hat 15.2.1-7)’
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/randomForestRHF/src'
gcc -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -Ishared  -I/usr/local/include   -fopenmp -fpic  -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes  -c R_init_randomForestRHF.c -o R_init_randomForestRHF.o
gcc -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -Ishared  -I/usr/local/include   -fopenmp -fpic  -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes  -c entry.c -o entry.o
gcc -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -Ishared  -I/usr/local/include   -fopenmp -fpic  -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes  -c medianLogStitchedHazard.c -o medianLogStitchedHazard.o
gcc -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -Ishared  -I/usr/local/include   -fopenmp -fpic  -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes  -c weightedStitchedHazard.c -o weightedStitchedHazard.o
gcc -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -Ishared  -I/usr/local/include   -fopenmp -fpic  -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes  -c augmentationOps.c -o augmentationOps.o
gcc -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -Ishared  -I/usr/local/include   -fopenmp -fpic  -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes  -c augmentationOpsCommon.c -o augmentationOpsCommon.o
gcc -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -Ishared  -I/usr/local/include   -fopenmp -fpic  -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes  -c augmentationOpsSimple.c -o augmentationOpsSimple.o
gcc -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -Ishared  -I/usr/local/include   -fopenmp -fpic  -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes  -c descriptor.c -o descriptor.o
gcc -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -Ishared  -I/usr/local/include   -fopenmp -fpic  -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes  -c entryGeneric.c -o entryGeneric.o
gcc -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -Ishared  -I/usr/local/include   -fopenmp -fpic  -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes  -c greedyOps.c -o greedyOps.o
gcc -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -Ishared  -I/usr/local/include   -fopenmp -fpic  -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes  -c internal.c -o internal.o
gcc -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -Ishared  -I/usr/local/include   -fopenmp -fpic  -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes  -c nodeOps.c -o nodeOps.o
gcc -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -Ishared  -I/usr/local/include   -fopenmp -fpic  -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes  -c nrutilDerived.c -o nrutilDerived.o
gcc -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -Ishared  -I/usr/local/include   -fopenmp -fpic  -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes  -c processEnsemble.c -o processEnsemble.o
gcc -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -Ishared  -I/usr/local/include   -fopenmp -fpic  -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes  -c rhfMain.c -o rhfMain.o
gcc -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -Ishared  -I/usr/local/include   -fopenmp -fpic  -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes  -c rhfMainRT.c -o rhfMainRT.o
gcc -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -Ishared  -I/usr/local/include   -fopenmp -fpic  -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes  -c server.c -o server.o
gcc -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -Ishared  -I/usr/local/include   -fopenmp -fpic  -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes  -c sexpOutgoing.c -o sexpOutgoing.o
gcc -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -Ishared  -I/usr/local/include   -fopenmp -fpic  -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes  -c splitGreedy.c -o splitGreedy.o
gcc -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -Ishared  -I/usr/local/include   -fopenmp -fpic  -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes  -c splitInfoDerived.c -o splitInfoDerived.o
gcc -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -Ishared  -I/usr/local/include   -fopenmp -fpic  -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes  -c splitTDC.c -o splitTDC.o
server.c: In function ‘server’:
server.c:35:11: warning: variable ‘k’ set but not used [-Wunused-but-set-variable]
   35 |   uint i, k;
      |           ^
gcc -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -Ishared  -I/usr/local/include   -fopenmp -fpic  -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes  -c splitNLS.c -o splitNLS.o
gcc -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -Ishared  -I/usr/local/include   -fopenmp -fpic  -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes  -c splitUtil.c -o splitUtil.o
gcc -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -Ishared  -I/usr/local/include   -fopenmp -fpic  -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes  -c stackOutput.c -o stackOutput.o
gcc -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -Ishared  -I/usr/local/include   -fopenmp -fpic  -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes  -c stackOutputQQ.c -o stackOutputQQ.o
gcc -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -Ishared  -I/usr/local/include   -fopenmp -fpic  -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes  -c stackOutputQQTest.c -o stackOutputQQTest.o
gcc -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -Ishared  -I/usr/local/include   -fopenmp -fpic  -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes  -c stackSubjectInfo.c -o stackSubjectInfo.o
gcc -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -Ishared  -I/usr/local/include   -fopenmp -fpic  -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes  -c survivalTDC.c -o survivalTDC.o
gcc -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -Ishared  -I/usr/local/include   -fopenmp -fpic  -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes  -c termOps.c -o termOps.o
gcc -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -Ishared  -I/usr/local/include   -fopenmp -fpic  -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes  -c treeOps.c -o treeOps.o
stackSubjectInfo.c: In function ‘stackSubjectArraysOnly’:
stackSubjectInfo.c:29:11: warning: unused variable ‘j’ [-Wunused-variable]
   29 |   uint i, j;
      |           ^
gcc -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -Ishared  -I/usr/local/include   -fopenmp -fpic  -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes  -c treeOpsRT.c -o treeOpsRT.o
gcc -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -Ishared  -I/usr/local/include   -fopenmp -fpic  -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes  -c shared/bootstrap.c -o shared/bootstrap.o
gcc -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -Ishared  -I/usr/local/include   -fopenmp -fpic  -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes  -c shared/classification.c -o shared/classification.o
gcc -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -Ishared  -I/usr/local/include   -fopenmp -fpic  -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes  -c shared/diagnostic.c -o shared/diagnostic.o
gcc -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -Ishared  -I/usr/local/include   -fopenmp -fpic  -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes  -c shared/error.c -o shared/error.o
gcc -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -Ishared  -I/usr/local/include   -fopenmp -fpic  -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes  -c shared/factorOps.c -o shared/factorOps.o
gcc -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -Ishared  -I/usr/local/include   -fopenmp -fpic  -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes  -c shared/internalCore.c -o shared/internalCore.o
gcc -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -Ishared  -I/usr/local/include   -fopenmp -fpic  -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes  -c shared/leafLink.c -o shared/leafLink.o
gcc -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -Ishared  -I/usr/local/include   -fopenmp -fpic  -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes  -c shared/nativeUtil.c -o shared/nativeUtil.o
gcc -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -Ishared  -I/usr/local/include   -fopenmp -fpic  -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes  -c shared/nodeBaseOps.c -o shared/nodeBaseOps.o
gcc -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -Ishared  -I/usr/local/include   -fopenmp -fpic  -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes  -c shared/nrutil.c -o shared/nrutil.o
gcc -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -Ishared  -I/usr/local/include   -fopenmp -fpic  -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes  -c shared/stackParallel.c -o shared/stackParallel.o
gcc -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -Ishared  -I/usr/local/include   -fopenmp -fpic  -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes  -c shared/polarityNew.c -o shared/polarityNew.o
gcc -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -Ishared  -I/usr/local/include   -fopenmp -fpic  -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes  -c shared/preprocessForestRecord.c -o shared/preprocessForestRecord.o
gcc -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -Ishared  -I/usr/local/include   -fopenmp -fpic  -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes  -c shared/quantile.c -o shared/quantile.o
gcc -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -Ishared  -I/usr/local/include   -fopenmp -fpic  -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes  -c shared/random.c -o shared/random.o
gcc -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -Ishared  -I/usr/local/include   -fopenmp -fpic  -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes  -c shared/regression.c -o shared/regression.o
gcc -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -Ishared  -I/usr/local/include   -fopenmp -fpic  -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes  -c shared/restoreTree.c -o shared/restoreTree.o
gcc -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -Ishared  -I/usr/local/include   -fopenmp -fpic  -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes  -c shared/sampling.c -o shared/sampling.o
gcc -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -Ishared  -I/usr/local/include   -fopenmp -fpic  -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes  -c shared/sexpIO.c -o shared/sexpIO.o
gcc -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -Ishared  -I/usr/local/include   -fopenmp -fpic  -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes  -c shared/sortedLink.c -o shared/sortedLink.o
gcc -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -Ishared  -I/usr/local/include   -fopenmp -fpic  -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes  -c shared/splitInfo.c -o shared/splitInfo.o
gcc -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -Ishared  -I/usr/local/include   -fopenmp -fpic  -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes  -c shared/stack.c -o shared/stack.o
gcc -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -Ishared  -I/usr/local/include   -fopenmp -fpic  -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes  -c shared/stackAuxiliaryInfo.c -o shared/stackAuxiliaryInfo.o
gcc -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -Ishared  -I/usr/local/include   -fopenmp -fpic  -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes  -c shared/stackForestObjects.c -o shared/stackForestObjects.o
gcc -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -Ishared  -I/usr/local/include   -fopenmp -fpic  -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes  -c shared/stackIncoming.c -o shared/stackIncoming.o
gcc -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -Ishared  -I/usr/local/include   -fopenmp -fpic  -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes  -c shared/stackMembershipVectors.c -o shared/stackMembershipVectors.o
gcc -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -Ishared  -I/usr/local/include   -fopenmp -fpic  -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes  -c shared/stackPreDefined.c -o shared/stackPreDefined.o
gcc -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -Ishared  -I/usr/local/include   -fopenmp -fpic  -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes  -c shared/survival.c -o shared/survival.o
gcc -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -Ishared  -I/usr/local/include   -fopenmp -fpic  -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes  -c shared/termBaseOps.c -o shared/termBaseOps.o
gcc -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -Ishared  -I/usr/local/include   -fopenmp -fpic  -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes  -c shared/trace.c -o shared/trace.o
gcc -shared -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -fpic -L/usr/local/lib64 -o randomForestRHF.so R_init_randomForestRHF.o entry.o medianLogStitchedHazard.o weightedStitchedHazard.o augmentationOps.o augmentationOpsCommon.o augmentationOpsSimple.o descriptor.o entryGeneric.o greedyOps.o internal.o nodeOps.o nrutilDerived.o processEnsemble.o rhfMain.o rhfMainRT.o server.o sexpOutgoing.o splitGreedy.o splitInfoDerived.o splitTDC.o splitNLS.o splitUtil.o stackOutput.o stackOutputQQ.o stackOutputQQTest.o stackSubjectInfo.o survivalTDC.o termOps.o treeOps.o treeOpsRT.o shared/bootstrap.o shared/classification.o shared/diagnostic.o shared/error.o shared/factorOps.o shared/internalCore.o shared/leafLink.o shared/nativeUtil.o shared/nodeBaseOps.o shared/nrutil.o shared/stackParallel.o shared/polarityNew.o shared/preprocessForestRecord.o shared/quantile.o shared/random.o shared/regression.o shared/restoreTree.o shared/sampling.o shared/sexpIO.o shared/sortedLink.o shared/splitInfo.o shared/stack.o shared/stackAuxiliaryInfo.o shared/stackForestObjects.o shared/stackIncoming.o shared/stackMembershipVectors.o shared/stackPreDefined.o shared/survival.o shared/termBaseOps.o shared/trace.o -fopenmp
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/randomForestRHF/src'
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/randomForestRHF/src'
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/randomForestRHF/src'
installing to /data/gannet/ripley/R/packages/tests-devel/randomForestRHF.Rcheck/00LOCK-randomForestRHF/00new/randomForestRHF/libs
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (randomForestRHF)