* installing *source* package ‘quantregForest’ ...
** package ‘quantregForest’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C compiler: ‘gcc-13 (GCC) 13.2.0’
using Fortran compiler: ‘GNU Fortran (GCC) 13.2.0’
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/quantregForest/src'
gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c classTree.c -o classTree.o
classTree.c: In function 'predictClassTree':
classTree.c:453:47: warning: 'cbestsplit' may be used uninitialized [-Wmaybe-uninitialized]
453 | k = cbestsplit[(int) x[m + i * mdim] - 1 + k * maxcat] ?
| ^
classTree.c:422:22: note: 'cbestsplit' was declared here
422 | int m, i, j, k, *cbestsplit;
| ^~~~~~~~~~
gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c init.c -o init.o
gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c regTree.c -o regTree.o
regTree.c: In function 'predictRegTree':
regTree.c:343:31: warning: 'cbestsplit' may be used uninitialized [-Wmaybe-uninitialized]
343 | k = cbestsplit[(int) x[m + i * mdim] - 1 + k * maxcat] ?
| ^
regTree.c:313:22: note: 'cbestsplit' was declared here
313 | int i, j, k, m, *cbestsplit;
| ^~~~~~~~~~
gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c regrf.c -o regrf.o
regrf.c: In function 'regRF':
regrf.c:52:25: warning: variable 'averrb' set but not used [-Wunused-but-set-variable]
52 | double errts = 0.0, averrb, meanY, meanYts, varY, varYts, r, xrand,
| ^~~~~~
regrf.c:212:25: warning: 'ytree' may be used uninitialized [-Wmaybe-uninitialized]
212 | predictRegTree(xts, ntest, mdim, lDaughter + idx,
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
213 | rDaughter + idx, nodestatus + idx, ytree,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
214 | upper + idx, avnode + idx,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~
215 | mbest + idx, treeSize[j], cat, *maxcat, nodexts);
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
regrf.c:55:36: note: 'ytree' was declared here
55 | double *yb, *xtmp, *xb, *ytr, *ytree, *tgini;
| ^~~~~
regrf.c:212:25: warning: 'nodexts' may be used uninitialized [-Wmaybe-uninitialized]
212 | predictRegTree(xts, ntest, mdim, lDaughter + idx,
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
213 | rDaughter + idx, nodestatus + idx, ytree,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
214 | upper + idx, avnode + idx,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~
215 | mbest + idx, treeSize[j], cat, *maxcat, nodexts);
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
regrf.c:61:30: note: 'nodexts' was declared here
61 | int *in, *nind, *nodex, *nodexts;
| ^~~~~~~
gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c rf.c -o rf.o
rf.c: In function 'classRF':
rf.c:103:10: warning: variable 'tp' set but not used [-Wunused-but-set-variable]
103 | *tp, *wr;
| ^~
rf.c:88:15: warning: variable 'nimp' set but not used [-Wunused-but-set-variable]
88 | mimp, nimp, near, nuse, noutall, nrightall, nrightimpall,
| ^~~~
rf.c:88:9: warning: variable 'mimp' set but not used [-Wunused-but-set-variable]
88 | mimp, nimp, near, nuse, noutall, nrightall, nrightimpall,
| ^~~~
rf.c:406:13: warning: 'oobpair' may be used uninitialized [-Wmaybe-uninitialized]
406 | computeProximity(prox, oobprox, nodex, jin, oobpair, near);
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
rf.c:97:43: note: 'oobpair' was declared here
97 | *at, *a, *b, *mind, *nind, *jts, *oobpair;
| ^~~~~~~
rf.c:354:25: warning: 'nclts' may be used uninitialized [-Wmaybe-uninitialized]
354 | TestSetError(countts, jts, clts, outclts, ntest, nclass, jb+1,
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
355 | errts + jb*(nclass+1), *labelts, nclts, cut);
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
rf.c:92:29: note: 'nclts' was declared here
92 | *nrightimp, *nout, *nclts, Ntree;
| ^~~~~
gfortran-13 -fpic -g -O2 -mtune=native -Wall -pedantic -c rfsub.f -o rfsub.o
rfsub.f:179:23:
179 | end if
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
rfsub.f:97:35:
97 | bestsplit(kbuild) = dble(a(msplit,int(best)))
| 1
Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion]
rfsub.f:98:39:
98 | bestsplitnext(kbuild) = dble(a(msplit,int(best)+1))
| 1
Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion]
rfsub.f:100:35:
100 | bestsplit(kbuild) = best
| 1
Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion]
gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c rfutils.c -o rfutils.o
gcc-13 -shared -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -fpic -L/usr/local/gcc13/lib64 -L/usr/local/lib64 -L/usr/local/clang18/lib/x86_64-unknown-linux-gnu -o quantregForest.so classTree.o init.o regTree.o regrf.o rf.o rfsub.o rfutils.o -lgfortran -lm -lquadmath
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/quantregForest/src'
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/quantregForest/src'
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/quantregForest/src'
installing to /data/gannet/ripley/R/packages/tests-devel/quantregForest.Rcheck/00LOCK-quantregForest/00new/quantregForest/libs
** R
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (quantregForest)