* installing *source* package ‘popPCR’ ... ** package ‘popPCR’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘gcc-14 (GCC) 14.0.1 20240503 (prerelease)’ using Fortran compiler: ‘GNU Fortran (GCC) 14.0.1 20240503 (prerelease)’ make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/popPCR/src' gcc-14 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c EMMIXskew_init.c -o EMMIXskew_init.o gcc-14 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c density.c -o density.o gfortran-14 -fpic -g -O2 -mtune=native -Wall -pedantic -c density2.f -o density2.o gcc-14 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c distance.c -o distance.o gcc-14 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c estep.c -o estep.o gfortran-14 -fpic -g -O2 -mtune=native -Wall -pedantic -c mixda.f -o mixda.o gcc-14 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c mixem.c -o mixem.o gcc-14 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c mixinit.c -o mixinit.o gfortran-14 -fpic -g -O2 -mtune=native -Wall -pedantic -c mixmsn.f -o mixmsn.o gfortran-14 -fpic -g -O2 -mtune=native -Wall -pedantic -c mixmsnda.f -o mixmsnda.o gfortran-14 -fpic -g -O2 -mtune=native -Wall -pedantic -c mixmst.f -o mixmst.o gfortran-14 -fpic -g -O2 -mtune=native -Wall -pedantic -c mixmstda.f -o mixmstda.o gfortran-14 -fpic -g -O2 -mtune=native -Wall -pedantic -c mixmvnda.f -o mixmvnda.o gfortran-14 -fpic -g -O2 -mtune=native -Wall -pedantic -c mixmvtda.f -o mixmvtda.o gcc-14 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c module.c -o module.o gcc-14 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c mstep.c -o mstep.o gfortran-14 -fpic -g -O2 -mtune=native -Wall -pedantic -c predmixdamsn.f -o predmixdamsn.o gfortran-14 -fpic -g -O2 -mtune=native -Wall -pedantic -c predmixdamst.f -o predmixdamst.o gcc-14 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c scaestep.c -o scaestep.o gfortran-14 -fpic -g -O2 -mtune=native -Wall -pedantic -c scamstep.f -o scamstep.o gcc-14 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c zeroin.c -o zeroin.o gcc-14 -shared -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -fpic -L/usr/local/gcc14/lib64 -L/usr/local/lib64 -o popPCR.so EMMIXskew_init.o density.o density2.o distance.o estep.o mixda.o mixem.o mixinit.o mixmsn.o mixmsnda.o mixmst.o mixmstda.o mixmvnda.o mixmvtda.o module.o mstep.o predmixdamsn.o predmixdamst.o scaestep.o scamstep.o zeroin.o -llapack -L/data/gannet/ripley/R/R-devel/lib -lRblas -lgfortran -lm -lquadmath -lgfortran -lm -lquadmath make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/popPCR/src' make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/popPCR/src' make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/popPCR/src' installing to /data/gannet/ripley/R/packages/tests-devel/popPCR.Rcheck/00LOCK-popPCR/00new/popPCR/libs ** R ** data *** moving datasets to lazyload DB ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (popPCR)