* installing *source* package ‘phenex’ ...
** package ‘phenex’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C compiler: ‘gcc-14 (GCC) 14.1.0’
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/phenex/src'
gcc-14 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG   -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes  -c analyzeBits.c -o analyzeBits.o
analyzeBits.c: In function 'getBits':
analyzeBits.c:26:13: warning: unused variable 'erg' [-Wunused-variable]
   26 |         int erg;
      |             ^~~
analyzeBits.c: In function 'getLandWater':
analyzeBits.c:36:13: warning: unused variable 'erg' [-Wunused-variable]
   36 |         int erg;
      |             ^~~
gcc-14 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG   -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes  -c condition.c -o condition.o
gcc-14 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG   -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes  -c date2doy.c -o date2doy.o
date2doy.c: In function 'isLeap':
date2doy.c:56:12: warning: suggest explicit braces to avoid ambiguous 'else' [-Wdangling-else]
   56 |         if (year % 4 == 0)
      |            ^
gcc-14 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG   -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes  -c phenex.c -o phenex.o
gcc-14 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG   -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes  -c quicksort.c -o quicksort.o
gcc-14 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG   -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes  -c ravg.c -o ravg.o
gcc-14 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG   -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes  -c savgol.c -o savgol.o
gcc-14 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG   -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes  -c sigmoid.c -o sigmoid.o
savgol.c: In function 'savGol':
savgol.c:8:19: warning: unused variable 'h' [-Wunused-variable]
    8 |         int days, h=21, i, j, count, step, position, errorflag=0;
      |                   ^
gcc-14 -shared -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -fpic -L/usr/local/gcc14/lib64 -L/usr/local/lib64 -o phenex.so analyzeBits.o condition.o date2doy.o phenex.o quicksort.o ravg.o savgol.o sigmoid.o
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/phenex/src'
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/phenex/src'
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/phenex/src'
installing to /data/gannet/ripley/R/packages/tests-devel/phenex.Rcheck/00LOCK-phenex/00new/phenex/libs
** R
** data
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (phenex)