* installing *source* package ‘pan’ ...
** this is package ‘pan’ version ‘1.9’
** package ‘pan’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C compiler: ‘gcc (GCC) 15.1.1 20250521 (Red Hat 15.1.1-2)’
using Fortran compiler: ‘GNU Fortran (GCC) 15.1.1 20250521 (Red Hat 15.1.1-2)’
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/pan/src'
gcc -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c package_native_routine_registration_skeleton.c -o package_native_routine_registration_skeleton.o
gfortran -fpic -g -O2 -mtune=native -Wall -pedantic -c pan.f -o pan.o
f951: Warning: Nonconforming tab character in column 1 of line 1274 [-Wtabs]
f951: Warning: Nonconforming tab character in column 1 of line 1275 [-Wtabs]
f951: Warning: Nonconforming tab character in column 1 of line 1276 [-Wtabs]
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f951: Warning: Nonconforming tab character in column 1 of line 1287 [-Wtabs]
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f951: Warning: Nonconforming tab character in column 1 of line 1289 [-Wtabs]
f951: Warning: Nonconforming tab character in column 1 of line 1290 [-Wtabs]
f951: Warning: Nonconforming tab character in column 1 of line 1291 [-Wtabs]
pan.f:659:19:
659 | sum=sum+wkrr1(k,i)*sigma(k,j)
| 1
Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion]
pan.f:668:19:
668 | sum=sum+wkrr2(i,k)*wkrr2(j,k)
| 1
Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion]
pan.f:1473:16:
1473 | sum=sum+xtwxinv(j,i)*xtwy(j)
| 1
Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion]
pan.f:1476:16:
1476 | sum=sum+xtwxinv(i,j)*xtwy(j)
| 1
Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion]
pan.f:1490:23:
1490 | sum1=sum1+delta(j)*vh(occ(j),occ(i),s)
| 1
Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion]
pan.f:1945:47:
1945 | double precision delta(ntot),sigma2,sum,vh(nmax,nmax,m),
| 1~~~~~~~~~~~~~~
Warning: Unused variable ‘vh’ declared at (1) [-Wunused-variable]
pan.f:1695:22:
1695 | integer ntot,p,xcol(p),occ(ntot),st,fin,nmax
| 1~~~~~~
Warning: Unused variable ‘xcol’ declared at (1) [-Wunused-variable]
pan.f:1345:30:
1345 | / wkq2,wkq3,y,delta,b,wk,w,xtw,xtwx,xtwy,xtwxinv)
| 1
Warning: Unused dummy argument ‘b’ at (1) [-Wunused-dummy-argument]
pan.f:1345:32:
1345 | / wkq2,wkq3,y,delta,b,wk,w,xtw,xtwx,xtwy,xtwxinv)
| 1~
Warning: Unused dummy argument ‘wk’ at (1) [-Wunused-dummy-argument]
pan.f:1345:12:
1345 | / wkq2,wkq3,y,delta,b,wk,w,xtw,xtwx,xtwy,xtwxinv)
| 1~~~
Warning: Unused dummy argument ‘wkq2’ at (1) [-Wunused-dummy-argument]
pan.f:1345:17:
1345 | / wkq2,wkq3,y,delta,b,wk,w,xtw,xtwx,xtwy,xtwxinv)
| 1~~~
Warning: Unused dummy argument ‘wkq3’ at (1) [-Wunused-dummy-argument]
pan.f:1344:19:
1344 | / pred,q,zcol,ztv,sig0,iflag,sig,psi,sigma2,p,xcol,beta,wkq1,
| 1~~~
Warning: Unused dummy argument ‘zcol’ at (1) [-Wunused-dummy-argument]
pan.f:1344:24:
1344 | / pred,q,zcol,ztv,sig0,iflag,sig,psi,sigma2,p,xcol,beta,wkq1,
| 1~~
Warning: Unused dummy argument ‘ztv’ at (1) [-Wunused-dummy-argument]
pan.f:1437:60:
1437 | / beta(p),wkq1(q,q),wkq2(q,q),y(ntot),delta(ntot),b(q,m),
| 1~~~~~
Warning: Unused variable ‘b’ declared at (1) [-Wunused-variable]
pan.f:1436:49:
1436 | / ztv(q,nmax,m),sig0(q,q,m),sig(q,q,m),psi(q,q),sigma2,
| 1~~~~~~~
Warning: Unused variable ‘psi’ declared at (1) [-Wunused-variable]
pan.f:1430:25:
1430 | / pred,q,iflag,sig,sigma2,p,xcol,beta,
| 1~~
Warning: Unused dummy argument ‘sig’ at (1) [-Wunused-dummy-argument]
pan.f:1436:26:
1436 | / ztv(q,nmax,m),sig0(q,q,m),sig(q,q,m),psi(q,q),sigma2,
| 1~~~~~~~~~~
Warning: Unused variable ‘sig0’ declared at (1) [-Wunused-variable]
pan.f:1438:12:
1438 | / wk(q,nmax,m),vh(nmax,nmax,m),wkq3(q,q),w(nmax,nmax,m),
| 1~~~~~~~~~~~
Warning: Unused variable ‘wk’ declared at (1) [-Wunused-variable]
pan.f:1437:20:
1437 | / beta(p),wkq1(q,q),wkq2(q,q),y(ntot),delta(ntot),b(q,m),
| 1~~~~~~~~
Warning: Unused variable ‘wkq1’ declared at (1) [-Wunused-variable]
pan.f:1437:30:
1437 | / beta(p),wkq1(q,q),wkq2(q,q),y(ntot),delta(ntot),b(q,m),
| 1~~~~~~~~
Warning: Unused variable ‘wkq2’ declared at (1) [-Wunused-variable]
pan.f:1438:41:
1438 | / wk(q,nmax,m),vh(nmax,nmax,m),wkq3(q,q),w(nmax,nmax,m),
| 1~~~~~~~~
Warning: Unused variable ‘wkq3’ declared at (1) [-Wunused-variable]
pan.f:1434:14:
1434 | / q,zcol(q),iflag,p,xcol(p),st,fin,s
| 1~~~~~~
Warning: Unused variable ‘zcol’ declared at (1) [-Wunused-variable]
pan.f:1436:12:
1436 | / ztv(q,nmax,m),sig0(q,q,m),sig(q,q,m),psi(q,q),sigma2,
| 1~~~~~~~~~~~~
Warning: Unused variable ‘ztv’ declared at (1) [-Wunused-variable]
pan.f:408:50:
408 | / npatt,pstfin(npatt,2),r,rmat(npatt,r),patt(ntot),pt
| 1~~~~~~~~~
Warning: Unused variable ‘patt’ declared at (1) [-Wunused-variable]
pan.f:763:37:
763 | double precision psi(r*q,r*q),sig(r*q,r*q,m),wkrqrq1(r*q,r*q),
| 1~~~~~~~~~~~~~
Warning: Unused variable ‘sig’ declared at (1) [-Wunused-variable]
pan.f:822:12:
822 | / wkrqrq1(r*q,r*q),wkrqrq2(r*q,r*q),sum,wkqrv(q*r)
| 1~~~~~~~~~~~~~~~
Warning: Unused variable ‘wkrqrq1’ declared at (1) [-Wunused-variable]
pan.f:704:35:
704 | double precision psi(q,q,r),sig(r*q,r*q,m),wkqq1(q,q),
| 1~~~~~~~~~~~~~
Warning: Unused variable ‘sig’ declared at (1) [-Wunused-variable]
pan.f:955:49:
955 | / sig(r*q,r*q,m),wkrr1(r,r),wkrr2(r,r),wkrqrq1(r*q,r*q),
| 1~~~~~~~~~~~~~~~
Warning: Unused variable ‘wkrqrq1’ declared at (1) [-Wunused-variable]
pan.f:1386:30:
1386 | / wkq2,wkq3,y,delta,b,wk,w,xtw,xtwx,xtwy,xtwxinv,ll)
| 1
Warning: Unused dummy argument ‘b’ at (1) [-Wunused-dummy-argument]
pan.f:1385:43:
1385 | / pred,q,zcol,ztv,sig0,iflag,sig,psi,sigma2,p,xcol,beta,wkq1,
| 1~~
Warning: Unused dummy argument ‘psi’ at (1) [-Wunused-dummy-argument]
pan.f:1385:28:
1385 | / pred,q,zcol,ztv,sig0,iflag,sig,psi,sigma2,p,xcol,beta,wkq1,
| 1~~~
Warning: Unused dummy argument ‘sig0’ at (1) [-Wunused-dummy-argument]
pan.f:1386:32:
1386 | / wkq2,wkq3,y,delta,b,wk,w,xtw,xtwx,xtwy,xtwxinv,ll)
| 1~
Warning: Unused dummy argument ‘wk’ at (1) [-Wunused-dummy-argument]
pan.f:1385:66:
1385 | / pred,q,zcol,ztv,sig0,iflag,sig,psi,sigma2,p,xcol,beta,wkq1,
| 1~~~
Warning: Unused dummy argument ‘wkq1’ at (1) [-Wunused-dummy-argument]
pan.f:1386:12:
1386 | / wkq2,wkq3,y,delta,b,wk,w,xtw,xtwx,xtwy,xtwxinv,ll)
| 1~~~
Warning: Unused dummy argument ‘wkq2’ at (1) [-Wunused-dummy-argument]
pan.f:1386:17:
1386 | / wkq2,wkq3,y,delta,b,wk,w,xtw,xtwx,xtwy,xtwxinv,ll)
| 1~~~
Warning: Unused dummy argument ‘wkq3’ at (1) [-Wunused-dummy-argument]
pan.f:1385:19:
1385 | / pred,q,zcol,ztv,sig0,iflag,sig,psi,sigma2,p,xcol,beta,wkq1,
| 1~~~
Warning: Unused dummy argument ‘zcol’ at (1) [-Wunused-dummy-argument]
pan.f:1385:24:
1385 | / pred,q,zcol,ztv,sig0,iflag,sig,psi,sigma2,p,xcol,beta,wkq1,
| 1~~
Warning: Unused dummy argument ‘ztv’ at (1) [-Wunused-dummy-argument]
gcc -shared -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -fpic -L/usr/local/lib64 -o pan.so package_native_routine_registration_skeleton.o pan.o -lgfortran -lm -lquadmath
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/pan/src'
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/pan/src'
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/pan/src'
installing to /data/gannet/ripley/R/packages/tests-devel/pan.Rcheck/00LOCK-pan/00new/pan/libs
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (pan)