* installing *source* package ‘opentimsr’ ...
** this is package ‘opentimsr’ version ‘1.2.3’
** package ‘opentimsr’ successfully unpacked and MD5 sums checked
** using staged installation
Using ZSTD_CFLAGS=
Using ZSTD_LIBS=-lzstd
** libs
specified C++20
using C++ compiler: ‘g++ (GCC) 16.2.1 20261029 (Red Hat 16.2.1-3)’
using C++20
make[1]: Entering directory '/data/localhost/ripley/R/packages/tests-devel/opentimsr/src'
g++ -std=gnu++20 -I"/data/localhost/ripley/R/R-devel/include" -DNDEBUG -I. -I./opentims_core -DOPENTIMS_BUILDING_R  -I'/data/localhost/ripley/R/test-dev/Rcpp/include' -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection   -c RcppExports.cpp -o RcppExports.o
g++ -std=gnu++20 -I"/data/localhost/ripley/R/R-devel/include" -DNDEBUG -I. -I./opentims_core -DOPENTIMS_BUILDING_R  -I'/data/localhost/ripley/R/test-dev/Rcpp/include' -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection   -c Rinterface.cpp -o Rinterface.o
g++ -std=gnu++20 -I"/data/localhost/ripley/R/R-devel/include" -DNDEBUG -I. -I./opentims_core -DOPENTIMS_BUILDING_R  -I'/data/localhost/ripley/R/test-dev/Rcpp/include' -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection   -c converters.cpp -o converters.o
g++ -std=gnu++20 -I"/data/localhost/ripley/R/R-devel/include" -DNDEBUG -I. -I./opentims_core -DOPENTIMS_BUILDING_R  -I'/data/localhost/ripley/R/test-dev/Rcpp/include' -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection   -c opentims.cpp -o opentims.o
g++ -std=gnu++20 -I"/data/localhost/ripley/R/R-devel/include" -DNDEBUG -I. -I./opentims_core -DOPENTIMS_BUILDING_R  -I'/data/localhost/ripley/R/test-dev/Rcpp/include' -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection   -c scan2inv_ion_mobility_converter.cpp -o scan2inv_ion_mobility_converter.o
g++ -std=gnu++20 -I"/data/localhost/ripley/R/R-devel/include" -DNDEBUG -I. -I./opentims_core -DOPENTIMS_BUILDING_R  -I'/data/localhost/ripley/R/test-dev/Rcpp/include' -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection   -c so_manager.cpp -o so_manager.o
g++ -std=gnu++20 -I"/data/localhost/ripley/R/R-devel/include" -DNDEBUG -I. -I./opentims_core -DOPENTIMS_BUILDING_R  -I'/data/localhost/ripley/R/test-dev/Rcpp/include' -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection   -c thread_mgr.cpp -o thread_mgr.o
g++ -std=gnu++20 -I"/data/localhost/ripley/R/R-devel/include" -DNDEBUG -I. -I./opentims_core -DOPENTIMS_BUILDING_R  -I'/data/localhost/ripley/R/test-dev/Rcpp/include' -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection   -c tof2mz_converter.cpp -o tof2mz_converter.o
g++ -std=gnu++20 -shared -L/usr/local/lib64 -o opentimsr.so RcppExports.o Rinterface.o converters.o opentims.o scan2inv_ion_mobility_converter.o so_manager.o thread_mgr.o tof2mz_converter.o -lzstd
make[1]: Leaving directory '/data/localhost/ripley/R/packages/tests-devel/opentimsr/src'
make[1]: Entering directory '/data/localhost/ripley/R/packages/tests-devel/opentimsr/src'
make[1]: Leaving directory '/data/localhost/ripley/R/packages/tests-devel/opentimsr/src'
installing to /data/localhost/ripley/R/packages/tests-devel/opentimsr.Rcheck/00LOCK-opentimsr/00new/opentimsr/libs
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (opentimsr)