* installing *source* package ‘multinet’ ...
** this is package ‘multinet’ version ‘4.3.2’
** package ‘multinet’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C++ compiler: ‘g++ (GCC) 15.1.1 20250521 (Red Hat 15.1.1-2)’
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/multinet/src'
g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Isrc -Ilibs -Iboost -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c RcppExports.cpp -o RcppExports.o
g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Isrc -Ilibs -Iboost -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c init.cpp -o init.o
g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Isrc -Ilibs -Iboost -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c r_functions.cpp -o r_functions.o
g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Isrc -Ilibs -Iboost -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c rcpp_module_definition.cpp -o rcpp_module_definition.o
In file included from infomap/infomap/InfomapBase.h:33,
from infomap/infomap/InfomapContext.h:31,
from src/community/infomap.hpp:18,
from r_functions.cpp:9:
infomap/infomap/../utils/MersenneTwister.h: In member function ‘void MTRand::reload()’:
infomap/infomap/../utils/MersenneTwister.h:333:17: warning: arithmetic between different enumeration types ‘MTRand::<unnamed enum>’ and ‘MTRand::<unnamed enum>’ is deprecated [-Wdeprecated-enum-enum-conversion]
333 | for ( i = N - M; i--; ++p )
| ~~^~~
infomap/infomap/../utils/MersenneTwister.h:340:24: warning: arithmetic between different enumeration types ‘MTRand::<unnamed enum>’ and ‘MTRand::<unnamed enum>’ is deprecated [-Wdeprecated-enum-enum-conversion]
340 | *p = twist( p[M-N], p[0], p[1] );
| ~^~
infomap/infomap/../utils/MersenneTwister.h:343:20: warning: arithmetic between different enumeration types ‘MTRand::<unnamed enum>’ and ‘MTRand::<unnamed enum>’ is deprecated [-Wdeprecated-enum-enum-conversion]
343 | *p = twist( p[M-N], p[0], state[0] );
| ~^~
r_functions.cpp: In function ‘RMLNetwork growMultiplex(size_t, long int, const Rcpp::GenericVector&, const Rcpp::NumericVector&, const Rcpp::NumericVector&, const Rcpp::NumericMatrix&)’:
r_functions.cpp:151:26: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
151 | if (dependency.nrow()!=num_layers || dependency.ncol()!=num_layers ||
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
r_functions.cpp:151:59: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
151 | if (dependency.nrow()!=num_layers || dependency.ncol()!=num_layers ||
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
r_functions.cpp:152:37: warning: comparison of integer expressions of different signedness: ‘R_xlen_t’ {aka ‘long int’} and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
152 | pr_internal_event.size()!=num_layers || pr_external_event.size()!=num_layers)
| ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
r_functions.cpp:152:77: warning: comparison of integer expressions of different signedness: ‘R_xlen_t’ {aka ‘long int’} and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
152 | pr_internal_event.size()!=num_layers || pr_external_event.size()!=num_layers)
| ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
r_functions.cpp:159:23: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘R_xlen_t’ {aka ‘long int’} [-Wsign-compare]
159 | for (size_t i=0; i<pr_internal_event.size(); i++)
| ~^~~~~~~~~~~~~~~~~~~~~~~~~
r_functions.cpp:166:23: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘R_xlen_t’ {aka ‘long int’} [-Wsign-compare]
166 | for (size_t i=0; i<pr_external_event.size(); i++)
| ~^~~~~~~~~~~~~~~~~~~~~~~~~
r_functions.cpp:173:23: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
173 | for (size_t i=0; i<dependency.nrow(); i++)
| ~^~~~~~~~~~~~~~~~~~
r_functions.cpp:177:27: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
177 | for (size_t j=0; j<dependency.ncol(); j++)
| ~^~~~~~~~~~~~~~~~~~
r_functions.cpp: In function ‘Rcpp::List generateCommunities(const std::string&, size_t, size_t, size_t, size_t, const Rcpp::NumericVector&, const Rcpp::NumericVector&)’:
r_functions.cpp:231:33: warning: comparison of integer expressions of different signedness: ‘R_xlen_t’ {aka ‘long int’} and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
231 | else if (pr_internal.size() == num_layers)
| ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~
r_functions.cpp:248:33: warning: comparison of integer expressions of different signedness: ‘R_xlen_t’ {aka ‘long int’} and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
248 | else if (pr_external.size() == num_layers)
| ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~
r_functions.cpp: In function ‘void addLayers(RMLNetwork&, const Rcpp::CharacterVector&, const Rcpp::LogicalVector&)’:
r_functions.cpp:906:27: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘R_xlen_t’ {aka ‘long int’} [-Wsign-compare]
906 | for (size_t i=0; i<layer_names.size(); i++)
| ~^~~~~~~~~~~~~~~~~~~
r_functions.cpp:922:27: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘R_xlen_t’ {aka ‘long int’} [-Wsign-compare]
922 | for (size_t i=0; i<layer_names.size(); i++)
| ~^~~~~~~~~~~~~~~~~~~
r_functions.cpp: In function ‘void addActors(RMLNetwork&, const Rcpp::CharacterVector&)’:
r_functions.cpp:940:23: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘R_xlen_t’ {aka ‘long int’} [-Wsign-compare]
940 | for (size_t i=0; i<actor_names.size(); i++)
| ~^~~~~~~~~~~~~~~~~~~
r_functions.cpp: In function ‘void addNodes(RMLNetwork&, const Rcpp::DataFrame&)’:
r_functions.cpp:966:23: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘R_xlen_t’ {aka ‘long int’} [-Wsign-compare]
966 | for (size_t i=0; i<vertices.nrow(); i++)
| ~^~~~~~~~~~~~~~~~
r_functions.cpp: In function ‘void addEdges(RMLNetwork&, const Rcpp::DataFrame&)’:
r_functions.cpp:1008:23: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘R_xlen_t’ {aka ‘long int’} [-Wsign-compare]
1008 | for (size_t i=0; i<edges.nrow(); i++)
| ~^~~~~~~~~~~~~
r_functions.cpp: In function ‘void setDirected(const RMLNetwork&, const Rcpp::DataFrame&)’:
r_functions.cpp:1069:23: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘R_xlen_t’ {aka ‘long int’} [-Wsign-compare]
1069 | for (size_t i=0; i<layers_dir.nrow(); i++)
| ~^~~~~~~~~~~~~~~~~~
r_functions.cpp: In function ‘void deleteLayers(RMLNetwork&, const Rcpp::CharacterVector&)’:
r_functions.cpp:1121:23: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘R_xlen_t’ {aka ‘long int’} [-Wsign-compare]
1121 | for (size_t i=0; i<layer_names.size(); i++)
| ~^~~~~~~~~~~~~~~~~~~
r_functions.cpp: In function ‘void newAttributes(RMLNetwork&, const Rcpp::CharacterVector&, const std::string&, const std::string&, const std::string&, const std::string&, const std::string&)’:
r_functions.cpp:1230:27: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘R_xlen_t’ {aka ‘long int’} [-Wsign-compare]
1230 | for (size_t i=0; i<attribute_names.size(); i++)
| ~^~~~~~~~~~~~~~~~~~~~~~~
r_functions.cpp:1267:27: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘R_xlen_t’ {aka ‘long int’} [-Wsign-compare]
1267 | for (size_t i=0; i<attribute_names.size(); i++)
| ~^~~~~~~~~~~~~~~~~~~~~~~
r_functions.cpp:1307:31: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘R_xlen_t’ {aka ‘long int’} [-Wsign-compare]
1307 | for (size_t i=0; i<attribute_names.size(); i++)
| ~^~~~~~~~~~~~~~~~~~~~~~~
r_functions.cpp: In function ‘void setValues(RMLNetwork&, const std::string&, const Rcpp::DataFrame&, const Rcpp::DataFrame&, const Rcpp::DataFrame&, const Rcpp::GenericVector&)’:
r_functions.cpp:1847:29: warning: comparison of integer expressions of different signedness: ‘std::vector<std::pair<const uu::net::Vertex*, uu::net::Network*> >::size_type’ {aka ‘long unsigned int’} and ‘R_xlen_t’ {aka ‘long int’} [-Wsign-compare]
1847 | if (vertices.size() != values.size() && values.size()!=1)
| ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
r_functions.cpp:1915:26: warning: comparison of integer expressions of different signedness: ‘std::vector<std::tuple<const uu::net::Vertex*, uu::net::Network*, const uu::net::Vertex*, uu::net::Network*> >::size_type’ {aka ‘long unsigned int’} and ‘R_xlen_t’ {aka ‘long int’} [-Wsign-compare]
1915 | if (edges.size() != values.size() && values.size()!=1)
| ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
r_functions.cpp: In function ‘Rcpp::List to_list(const Rcpp::DataFrame&, const RMLNetwork&)’:
r_functions.cpp:3291:23: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘R_xlen_t’ {aka ‘long int’} [-Wsign-compare]
3291 | for (size_t i=0; i<cs.nrow(); i++)
| ~^~~~~~~~~~
r_functions.cpp: In function ‘Rcpp::DataFrame multiforce_ml(const RMLNetwork&, const Rcpp::NumericVector&, const Rcpp::NumericVector&, const Rcpp::NumericVector&, int)’:
r_functions.cpp:3357:25: warning: comparison of integer expressions of different signedness: ‘R_xlen_t’ {aka ‘long int’} and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
3357 | else if (w_in.size()==layers->size())
| ~~~~~~~~~~~^~~~~~~~~~~~~~~~
r_functions.cpp:3378:28: warning: comparison of integer expressions of different signedness: ‘R_xlen_t’ {aka ‘long int’} and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
3378 | else if (w_inter.size()==layers->size())
| ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
r_functions.cpp:3399:28: warning: comparison of integer expressions of different signedness: ‘R_xlen_t’ {aka ‘long int’} and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
3399 | else if (gravity.size()==layers->size())
| ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
In file included from src/community/mlcpm.hpp:22,
from r_functions.cpp:12:
src/community/mlcpm.ipp: In instantiation of ‘std::unique_ptr<uu::net::CommunityStructure<M> > uu::net::mlcpm(const M*, std::size_t, std::size_t) [with M = MultilayerNetwork; std::size_t = long unsigned int]’:
r_functions.cpp:3120:28: required from here
3120 | auto com_struct = mlcpm(mnet, k, m);
| ~~~~~^~~~~~~~~~~~
src/community/mlcpm.ipp:63:20: warning: moving a temporary object prevents copy elision [-Wpessimizing-move]
63 | result->add(std::move(c->to_community()));
| ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
src/community/mlcpm.ipp:63:20: note: remove ‘std::move’ call
In file included from src/community/modularity.hpp:47,
from r_functions.cpp:13:
src/community/modularity.ipp: In instantiation of ‘double uu::net::modularity(const M*, const COMM*, double) [with M = MultilayerNetwork; COMM = CommunityStructure<MultilayerNetwork>]’:
r_functions.cpp:3234:31: required from here
3234 | return uu::net::modularity(mnet, communities.get(), omega);
| ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
src/community/modularity.ipp:149:15: warning: unused variable ‘actor’ [-Wunused-variable]
149 | for (auto actor: *mnet->actors())
| ^~~~~
In file included from src/community/abacus.ipp:10,
from src/community/abacus.hpp:30,
from r_functions.cpp:8:
src/community/_impl/PillarCommunity.hpp: In instantiation of ‘std::unique_ptr<uu::net::CommunityStructure<M> > uu::net::to_vertex_layer_community_structure(const std::set<std::unique_ptr<PillarCommunity<M> > >&) [with M = MultilayerNetwork]’:
src/community/abacus.ipp:36:47: required from ‘std::unique_ptr<uu::net::CommunityStructure<M> > uu::net::abacus(const M*, int, int) [with M = MultilayerNetwork]’
36 | return to_vertex_layer_community_structure(com);
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~
r_functions.cpp:3173:38: required from here
3173 | auto com_struct = uu::net::abacus(mnet, min_actors, min_layers);
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
src/community/_impl/PillarCommunity.hpp:99:17: warning: moving a temporary object prevents copy elision [-Wpessimizing-move]
99 | res->add(std::move(to_vertex_layer_community(c.get())));
| ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
src/community/_impl/PillarCommunity.hpp:99:17: note: remove ‘std::move’ call
g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Isrc -Ilibs -Iboost -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c rcpp_utils.cpp -o rcpp_utils.o
rcpp_utils.cpp: In function ‘std::vector<std::pair<const uu::net::Vertex*, const uu::net::Network*> > resolve_const_vertices(const uu::net::MultilayerNetwork*, const Rcpp::DataFrame&)’:
rcpp_utils.cpp:237:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
237 | for (int i=0; i<num_rows; i++)
| ~^~~~~~~~~
rcpp_utils.cpp: In function ‘std::vector<std::pair<const uu::net::Vertex*, uu::net::Network*> > resolve_vertices(uu::net::MultilayerNetwork*, const Rcpp::DataFrame&)’:
rcpp_utils.cpp:278:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
278 | for (int i=0; i<num_rows; i++)
| ~^~~~~~~~~
rcpp_utils.cpp: In function ‘std::vector<std::tuple<const uu::net::Vertex*, const uu::net::Network*, const uu::net::Vertex*, const uu::net::Network*> > resolve_const_edges(const uu::net::MultilayerNetwork*, const Rcpp::DataFrame&)’:
rcpp_utils.cpp:322:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
322 | for (int i=0; i<num_rows; i++)
| ~^~~~~~~~~
rcpp_utils.cpp: In function ‘std::vector<std::tuple<const uu::net::Vertex*, uu::net::Network*, const uu::net::Vertex*, uu::net::Network*> > resolve_edges(uu::net::MultilayerNetwork*, const Rcpp::DataFrame&)’:
rcpp_utils.cpp:398:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
398 | for (int i=0; i<num_rows; i++)
| ~^~~~~~~~~
rcpp_utils.cpp: In function ‘std::unique_ptr<uu::net::CommunityStructure<uu::net::MultilayerNetwork> > to_communities(const Rcpp::DataFrame&, const uu::net::MultilayerNetwork*)’:
rcpp_utils.cpp:541:23: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘R_xlen_t’ {aka ‘long int’} [-Wsign-compare]
541 | for (size_t i=0; i<com.nrow(); i++) {
| ~^~~~~~~~~~~
g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Isrc -Ilibs -Iboost -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c src/community/_impl/common.cpp -o src/community/_impl/common.o
g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Isrc -Ilibs -Iboost -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c src/community/_impl/glouvain2_utils.cpp -o src/community/_impl/glouvain2_utils.o
g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Isrc -Ilibs -Iboost -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c src/community/_impl/MetaNetwork.cpp -o src/community/_impl/MetaNetwork.o
g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Isrc -Ilibs -Iboost -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c src/community/_impl/GMetaNetwork.cpp -o src/community/_impl/GMetaNetwork.o
g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Isrc -Ilibs -Iboost -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c src/community/_impl/louvain_utils.cpp -o src/community/_impl/louvain_utils.o
In file included from /usr/include/c++/15/string:56,
from /usr/include/c++/15/bits/locale_classes.h:42,
from /usr/include/c++/15/bits/ios_base.h:43,
from /usr/include/c++/15/ios:46,
from /usr/include/c++/15/istream:42,
from /usr/include/c++/15/sstream:42,
from r_functions.cpp:1:
In member function ‘constexpr std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::size_type std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::size() const [with _CharT = char; _Traits = std::char_traits<char>; _Alloc = std::allocator<char>]’,
inlined from ‘constexpr std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::size_type std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::length() const [with _CharT = char; _Traits = std::char_traits<char>; _Alloc = std::allocator<char>]’ at /usr/include/c++/15/bits/basic_string.h:1176:20,
inlined from ‘constexpr std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::basic_string(const std::__cxx11::basic_string<_CharT, _Traits, _Alloc>&) [with _CharT = char; _Traits = std::char_traits<char>; _Alloc = std::allocator<char>]’ at /usr/include/c++/15/bits/basic_string.h:617:20,
inlined from ‘Rcpp::internal::generic_name_proxy<RTYPE, StoragePolicy>::generic_name_proxy(VECTOR&, const std::string&) [with int RTYPE = 19; StoragePolicy = Rcpp::PreserveStorage]’ at /data/gannet/ripley/R/test-dev/Rcpp/include/Rcpp/vector/proxy.h:140:15,
inlined from ‘Rcpp::Vector<RTYPE, StoragePolicy>::NameProxy Rcpp::Vector<RTYPE, StoragePolicy>::operator[](const std::string&) [with int RTYPE = 19; StoragePolicy = Rcpp::PreserveStorage]’ at /data/gannet/ripley/R/test-dev/Rcpp/include/Rcpp/vector/Vector.h:363:39,
inlined from ‘Rcpp::DataFrame getValues(const RMLNetwork&, const std::string&, const Rcpp::DataFrame&, const Rcpp::DataFrame&, const Rcpp::DataFrame&)’ at r_functions.cpp:1733:26:
/usr/include/c++/15/bits/basic_string.h:1165:19: warning: ‘att’ may be used uninitialized [-Wmaybe-uninitialized]
1165 | size_type __sz = _M_string_length;
| ^~~~
r_functions.cpp: In function ‘Rcpp::DataFrame getValues(const RMLNetwork&, const std::string&, const Rcpp::DataFrame&, const Rcpp::DataFrame&, const Rcpp::DataFrame&)’:
r_functions.cpp:1614:36: note: ‘att’ was declared here
1614 | const uu::core::Attribute* att;
| ^~~
In member function ‘constexpr std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::size_type std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::size() const [with _CharT = char; _Traits = std::char_traits<char>; _Alloc = std::allocator<char>]’,
inlined from ‘constexpr std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::size_type std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::length() const [with _CharT = char; _Traits = std::char_traits<char>; _Alloc = std::allocator<char>]’ at /usr/include/c++/15/bits/basic_string.h:1176:20,
inlined from ‘constexpr std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::basic_string(const std::__cxx11::basic_string<_CharT, _Traits, _Alloc>&) [with _CharT = char; _Traits = std::char_traits<char>; _Alloc = std::allocator<char>]’ at /usr/include/c++/15/bits/basic_string.h:617:20,
inlined from ‘Rcpp::internal::generic_name_proxy<RTYPE, StoragePolicy>::generic_name_proxy(VECTOR&, const std::string&) [with int RTYPE = 19; StoragePolicy = Rcpp::PreserveStorage]’ at /data/gannet/ripley/R/test-dev/Rcpp/include/Rcpp/vector/proxy.h:140:15,
inlined from ‘Rcpp::Vector<RTYPE, StoragePolicy>::NameProxy Rcpp::Vector<RTYPE, StoragePolicy>::operator[](const std::string&) [with int RTYPE = 19; StoragePolicy = Rcpp::PreserveStorage]’ at /data/gannet/ripley/R/test-dev/Rcpp/include/Rcpp/vector/Vector.h:363:39,
inlined from ‘Rcpp::DataFrame getValues(const RMLNetwork&, const std::string&, const Rcpp::DataFrame&, const Rcpp::DataFrame&, const Rcpp::DataFrame&)’ at r_functions.cpp:1600:26:
/usr/include/c++/15/bits/basic_string.h:1165:19: warning: ‘att’ may be used uninitialized [-Wmaybe-uninitialized]
1165 | size_type __sz = _M_string_length;
| ^~~~
r_functions.cpp: In function ‘Rcpp::DataFrame getValues(const RMLNetwork&, const std::string&, const Rcpp::DataFrame&, const Rcpp::DataFrame&, const Rcpp::DataFrame&)’:
r_functions.cpp:1518:36: note: ‘att’ was declared here
1518 | const uu::core::Attribute* att;
| ^~~
g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Isrc -Ilibs -Iboost -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c src/community/optimize_slices.cpp -o src/community/optimize_slices.o
g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Isrc -Ilibs -Iboost -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c src/core/arules/generate_subsets.cpp -o src/core/arules/generate_subsets.o
g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Isrc -Ilibs -Iboost -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c src/core/arules/bottom_up_search.cpp -o src/core/arules/bottom_up_search.o
g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Isrc -Ilibs -Iboost -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c src/core/arules/join_itemsets.cpp -o src/core/arules/join_itemsets.o
g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Isrc -Ilibs -Iboost -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c src/core/arules/read_transactions.cpp -o src/core/arules/read_transactions.o
g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Isrc -Ilibs -Iboost -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c src/core/arules/join_items.cpp -o src/core/arules/join_items.o
g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Isrc -Ilibs -Iboost -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c src/core/arules/eclat.cpp -o src/core/arules/eclat.o
g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Isrc -Ilibs -Iboost -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c src/core/arules/freq_itemset.cpp -o src/core/arules/freq_itemset.o
g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Isrc -Ilibs -Iboost -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c src/core/arules/intersect_tids.cpp -o src/core/arules/intersect_tids.o
g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Isrc -Ilibs -Iboost -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c src/core/objects/Object.cpp -o src/core/objects/Object.o
g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Isrc -Ilibs -Iboost -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c src/core/utils/random.cpp -o src/core/utils/random.o
g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Isrc -Ilibs -Iboost -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c src/core/utils/NameIterator.cpp -o src/core/utils/NameIterator.o
g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Isrc -Ilibs -Iboost -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c src/core/utils/string.cpp -o src/core/utils/string.o
g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Isrc -Ilibs -Iboost -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c src/core/utils/CSVReader.cpp -o src/core/utils/CSVReader.o
g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Isrc -Ilibs -Iboost -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c src/core/utils/vector.cpp -o src/core/utils/vector.o
g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Isrc -Ilibs -Iboost -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c src/core/exceptions/NullPtrException.cpp -o src/core/exceptions/NullPtrException.o
g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Isrc -Ilibs -Iboost -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c src/core/exceptions/FileNotFoundException.cpp -o src/core/exceptions/FileNotFoundException.o
g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Isrc -Ilibs -Iboost -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c src/core/exceptions/assert_not_null.cpp -o src/core/exceptions/assert_not_null.o
g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Isrc -Ilibs -Iboost -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c src/core/exceptions/DuplicateElementException.cpp -o src/core/exceptions/DuplicateElementException.o
g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Isrc -Ilibs -Iboost -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c src/core/exceptions/ExternalLibException.cpp -o src/core/exceptions/ExternalLibException.o
g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Isrc -Ilibs -Iboost -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c src/core/exceptions/ElementNotFoundException.cpp -o src/core/exceptions/ElementNotFoundException.o
g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Isrc -Ilibs -Iboost -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c src/core/exceptions/OutOfBoundsException.cpp -o src/core/exceptions/OutOfBoundsException.o
g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Isrc -Ilibs -Iboost -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c src/core/exceptions/OperationNotSupportedException.cpp -o src/core/exceptions/OperationNotSupportedException.o
g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Isrc -Ilibs -Iboost -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c src/core/exceptions/WrongParameterException.cpp -o src/core/exceptions/WrongParameterException.o
g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Isrc -Ilibs -Iboost -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c src/core/exceptions/WrongFormatException.cpp -o src/core/exceptions/WrongFormatException.o
g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Isrc -Ilibs -Iboost -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c src/core/attributes/Text.cpp -o src/core/attributes/Text.o
g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Isrc -Ilibs -Iboost -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c src/core/attributes/Attribute.cpp -o src/core/attributes/Attribute.o
g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Isrc -Ilibs -Iboost -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c src/core/attributes/conversion.cpp -o src/core/attributes/conversion.o
g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Isrc -Ilibs -Iboost -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c src/core/attributes/AttributeType.cpp -o src/core/attributes/AttributeType.o
g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Isrc -Ilibs -Iboost -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c src/core/attributes/Time.cpp -o src/core/attributes/Time.o
src/core/attributes/conversion.cpp: In function ‘uu::core::Time uu::core::epoch_to_time(int)’:
src/core/attributes/conversion.cpp:165:23: error: no matching function for call to ‘parse(const std::string&, uu::core::Time&)’
165 | in1 >> date::parse(kDEFAULT_TIME_FORMAT, epoch);
| ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
src/core/attributes/conversion.cpp:165:23: note: there are 8 candidates
In file included from src/core/attributes/Time.hpp:18,
from src/core/attributes/conversion.hpp:13,
from src/core/attributes/conversion.cpp:1:
src/core/attributes/date.hpp:9414:1: note: candidate 1: ‘template<class Parsable, class CharT, class Traits, class Alloc> decltype ((date::from_stream(declval<std::basic_istream<_CharT, _Traits>&>(), format.c_str(), tp), date::parse_manip<Parsable, CharT, Traits, Alloc>{format, tp})) date::parse(const std::__cxx11::basic_string<_CharT, _Traits, _Alloc>&, Parsable&)’
9414 | parse(const std::basic_string<CharT, Traits, Alloc>& format, Parsable& tp)
| ^~~~~
src/core/attributes/date.hpp:9414:1: note: template argument deduction/substitution failed:
src/core/attributes/date.hpp: In substitution of ‘template<class Parsable, class CharT, class Traits, class Alloc> decltype ((date::from_stream(declval<std::basic_istream<_CharT, _Traits>&>(), format.c_str(), tp), date::parse_manip<Parsable, CharT, Traits, Alloc>{format, tp})) date::parse(const std::__cxx11::basic_string<_CharT, _Traits, _Alloc>&, Parsable&) [with Parsable = std::chrono::time_point<std::chrono::_V2::system_clock, std::chrono::duration<long int> >; CharT = char; Traits = std::char_traits<char>; Alloc = std::allocator<char>]’:
src/core/attributes/conversion.cpp:165:23: required from here
165 | in1 >> date::parse(kDEFAULT_TIME_FORMAT, epoch);
| ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
src/core/attributes/date.hpp:9415:24: error: call of overloaded ‘from_stream(std::basic_istream<char>&, const char*, std::chrono::time_point<std::chrono::_V2::system_clock, std::chrono::duration<long int> >&)’ is ambiguous
9415 | -> decltype(from_stream(std::declval<std::basic_istream<CharT, Traits>&>(),
| ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
9416 | format.c_str(), tp),
| ~~~~~~~~~~~~~~~~~~~
src/core/attributes/date.hpp:9415:24: note: there are 25 candidates
src/core/attributes/date.hpp:9306:1: note: candidate 1: ‘std::basic_istream<_CharT, _Traits>& date::from_stream(std::basic_istream<_CharT, _Traits>&, const CharT*, sys_time<Duration>&, std::__cxx11::basic_string<_CharT, _Traits, _Alloc>*, std::chrono::minutes*) [with Duration = std::chrono::duration<long int>; CharT = char; Traits = std::char_traits<char>; Alloc = std::allocator<char>; sys_time<Duration> = std::chrono::time_point<std::chrono::_V2::system_clock, std::chrono::duration<long int> >; std::chrono::minutes = std::chrono::duration<long int, std::ratio<60> >]’
9306 | from_stream(std::basic_istream<CharT, Traits>& is, const CharT* fmt,
| ^~~~~~~~~~~
In file included from /usr/include/c++/15/chrono:3378,
from src/core/attributes/Time.hpp:17:
/usr/include/c++/15/bits/chrono_io.h:2941:5: note: candidate 2: ‘std::basic_istream<_CharT, _Traits>& std::chrono::from_stream(std::basic_istream<_CharT, _Traits>&, const _CharT*, sys_time<_Duration>&, std::__cxx11::basic_string<_CharT, _Traits, _Alloc>*, minutes*) [with _CharT = char; _Traits = std::char_traits<char>; _Duration = duration<long int>; _Alloc = std::allocator<char>; sys_time<_Duration> = time_point<_V2::system_clock, duration<long int> >; minutes = duration<long int, std::ratio<60> >]’
2941 | from_stream(basic_istream<_CharT, _Traits>& __is, const _CharT* __fmt,
| ^~~~~~~~~~~
src/core/attributes/date.hpp:9428:1: note: candidate 2: ‘template<class Parsable, class CharT, class Traits, class Alloc> decltype ((date::from_stream(declval<std::basic_istream<_CharT, _Traits>&>(), format.c_str(), tp, (& abbrev)), date::parse_manip<Parsable, CharT, Traits, Alloc>{format, tp, (& abbrev)})) date::parse(const std::__cxx11::basic_string<_CharT, _Traits, _Alloc>&, Parsable&, std::__cxx11::basic_string<_CharT, _Traits, _Alloc>&)’
9428 | parse(const std::basic_string<CharT, Traits, Alloc>& format, Parsable& tp,
| ^~~~~
src/core/attributes/date.hpp:9428:1: note: candidate expects 3 arguments, 2 provided
src/core/attributes/date.hpp:9443:1: note: candidate 3: ‘template<class Parsable, class CharT, class Traits, class Alloc> decltype ((date::from_stream(declval<std::basic_istream<_CharT, _Traits>&>(), format.c_str(), tp, declval<std::__cxx11::basic_string<_CharT, _Traits, _Alloc>*>(), (& offset)), date::parse_manip<Parsable, CharT, Traits, Alloc>{format, tp, nullptr, (& offset)})) date::parse(const std::__cxx11::basic_string<_CharT, _Traits, _Alloc>&, Parsable&, std::chrono::minutes&)’
9443 | parse(const std::basic_string<CharT, Traits, Alloc>& format, Parsable& tp,
| ^~~~~
src/core/attributes/date.hpp:9443:1: note: candidate expects 3 arguments, 2 provided
src/core/attributes/date.hpp:9460:1: note: candidate 4: ‘template<class Parsable, class CharT, class Traits, class Alloc> decltype ((date::from_stream(declval<std::basic_istream<_CharT, _Traits>&>(), format.c_str(), tp, (& abbrev), (& offset)), date::parse_manip<Parsable, CharT, Traits, Alloc>{format, tp, (& abbrev), (& offset)})) date::parse(const std::__cxx11::basic_string<_CharT, _Traits, _Alloc>&, Parsable&, std::__cxx11::basic_string<_CharT, _Traits, _Alloc>&, std::chrono::minutes&)’
9460 | parse(const std::basic_string<CharT, Traits, Alloc>& format, Parsable& tp,
| ^~~~~
src/core/attributes/date.hpp:9460:1: note: candidate expects 4 arguments, 2 provided
src/core/attributes/date.hpp:9477:1: note: candidate 5: ‘template<class Parsable, class CharT> decltype ((date::from_stream(declval<std::basic_istream<CharT, std::char_traits<_CharT> >&>(), format, tp), date::parse_manip<Parsable, CharT>{format, tp})) date::parse(const CharT*, Parsable&)’
9477 | parse(const CharT* format, Parsable& tp)
| ^~~~~
src/core/attributes/date.hpp:9477:1: note: template argument deduction/substitution failed:
src/core/attributes/conversion.cpp:165:23: note: mismatched types ‘const CharT*’ and ‘std::__cxx11::basic_string<char>’
165 | in1 >> date::parse(kDEFAULT_TIME_FORMAT, epoch);
| ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
src/core/attributes/date.hpp:9490:1: note: candidate 6: ‘template<class Parsable, class CharT, class Traits, class Alloc> decltype ((date::from_stream(declval<std::basic_istream<_CharT, _Traits>&>(), format, tp, (& abbrev)), date::parse_manip<Parsable, CharT, Traits, Alloc>{format, tp, (& abbrev)})) date::parse(const CharT*, Parsable&, std::__cxx11::basic_string<_CharT, _Traits, _Alloc>&)’
9490 | parse(const CharT* format, Parsable& tp, std::basic_string<CharT, Traits, Alloc>& abbrev)
| ^~~~~
src/core/attributes/date.hpp:9490:1: note: candidate expects 3 arguments, 2 provided
src/core/attributes/date.hpp:9504:1: note: candidate 7: ‘template<class Parsable, class CharT> decltype ((date::from_stream(declval<std::basic_istream<CharT, std::char_traits<_CharT> >&>(), format, tp, declval<std::__cxx11::basic_string<_CharT, std::char_traits<_CharT>, std::allocator<_T2> >*>(), (& offset)), date::parse_manip<Parsable, CharT>{format, tp, nullptr, (& offset)})) date::parse(const CharT*, Parsable&, std::chrono::minutes&)’
9504 | parse(const CharT* format, Parsable& tp, std::chrono::minutes& offset)
| ^~~~~
src/core/attributes/date.hpp:9504:1: note: candidate expects 3 arguments, 2 provided
src/core/attributes/date.hpp:9518:1: note: candidate 8: ‘template<class Parsable, class CharT, class Traits, class Alloc> decltype ((date::from_stream(declval<std::basic_istream<_CharT, _Traits>&>(), format, tp, (& abbrev), (& offset)), date::parse_manip<Parsable, CharT, Traits, Alloc>{format, tp, (& abbrev), (& offset)})) date::parse(const CharT*, Parsable&, std::__cxx11::basic_string<_CharT, _Traits, _Alloc>&, std::chrono::minutes&)’
9518 | parse(const CharT* format, Parsable& tp,
| ^~~~~
src/core/attributes/date.hpp:9518:1: note: candidate expects 4 arguments, 2 provided
src/core/attributes/conversion.cpp: In function ‘uu::core::Time uu::core::to_time(const std::string&, const std::string&)’:
src/core/attributes/conversion.cpp:202:22: error: no matching function for call to ‘parse(const std::string&, uu::core::Time&)’
202 | in >> date::parse(format, result);
| ~~~~~~~~~~~^~~~~~~~~~~~~~~~
src/core/attributes/conversion.cpp:202:22: note: there are 8 candidates
src/core/attributes/date.hpp:9414:1: note: candidate 1: ‘template<class Parsable, class CharT, class Traits, class Alloc> decltype ((date::from_stream(declval<std::basic_istream<_CharT, _Traits>&>(), format.c_str(), tp), date::parse_manip<Parsable, CharT, Traits, Alloc>{format, tp})) date::parse(const std::__cxx11::basic_string<_CharT, _Traits, _Alloc>&, Parsable&)’
9414 | parse(const std::basic_string<CharT, Traits, Alloc>& format, Parsable& tp)
| ^~~~~
src/core/attributes/date.hpp:9414:1: note: template argument deduction/substitution failed:
src/core/attributes/date.hpp: In substitution of ‘template<class Parsable, class CharT, class Traits, class Alloc> decltype ((date::from_stream(declval<std::basic_istream<_CharT, _Traits>&>(), format.c_str(), tp), date::parse_manip<Parsable, CharT, Traits, Alloc>{format, tp})) date::parse(const std::__cxx11::basic_string<_CharT, _Traits, _Alloc>&, Parsable&) [with Parsable = std::chrono::time_point<std::chrono::_V2::system_clock, std::chrono::duration<long int> >; CharT = char; Traits = std::char_traits<char>; Alloc = std::allocator<char>]’:
src/core/attributes/conversion.cpp:202:22: required from here
202 | in >> date::parse(format, result);
| ~~~~~~~~~~~^~~~~~~~~~~~~~~~
src/core/attributes/date.hpp:9415:24: error: call of overloaded ‘from_stream(std::basic_istream<char>&, const char*, std::chrono::time_point<std::chrono::_V2::system_clock, std::chrono::duration<long int> >&)’ is ambiguous
9415 | -> decltype(from_stream(std::declval<std::basic_istream<CharT, Traits>&>(),
| ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
9416 | format.c_str(), tp),
| ~~~~~~~~~~~~~~~~~~~
src/core/attributes/date.hpp:9415:24: note: there are 25 candidates
src/core/attributes/date.hpp:9306:1: note: candidate 1: ‘std::basic_istream<_CharT, _Traits>& date::from_stream(std::basic_istream<_CharT, _Traits>&, const CharT*, sys_time<Duration>&, std::__cxx11::basic_string<_CharT, _Traits, _Alloc>*, std::chrono::minutes*) [with Duration = std::chrono::duration<long int>; CharT = char; Traits = std::char_traits<char>; Alloc = std::allocator<char>; sys_time<Duration> = std::chrono::time_point<std::chrono::_V2::system_clock, std::chrono::duration<long int> >; std::chrono::minutes = std::chrono::duration<long int, std::ratio<60> >]’
9306 | from_stream(std::basic_istream<CharT, Traits>& is, const CharT* fmt,
| ^~~~~~~~~~~
/usr/include/c++/15/bits/chrono_io.h:2941:5: note: candidate 2: ‘std::basic_istream<_CharT, _Traits>& std::chrono::from_stream(std::basic_istream<_CharT, _Traits>&, const _CharT*, sys_time<_Duration>&, std::__cxx11::basic_string<_CharT, _Traits, _Alloc>*, minutes*) [with _CharT = char; _Traits = std::char_traits<char>; _Duration = duration<long int>; _Alloc = std::allocator<char>; sys_time<_Duration> = time_point<_V2::system_clock, duration<long int> >; minutes = duration<long int, std::ratio<60> >]’
2941 | from_stream(basic_istream<_CharT, _Traits>& __is, const _CharT* __fmt,
| ^~~~~~~~~~~
src/core/attributes/date.hpp:9428:1: note: candidate 2: ‘template<class Parsable, class CharT, class Traits, class Alloc> decltype ((date::from_stream(declval<std::basic_istream<_CharT, _Traits>&>(), format.c_str(), tp, (& abbrev)), date::parse_manip<Parsable, CharT, Traits, Alloc>{format, tp, (& abbrev)})) date::parse(const std::__cxx11::basic_string<_CharT, _Traits, _Alloc>&, Parsable&, std::__cxx11::basic_string<_CharT, _Traits, _Alloc>&)’
9428 | parse(const std::basic_string<CharT, Traits, Alloc>& format, Parsable& tp,
| ^~~~~
src/core/attributes/date.hpp:9428:1: note: candidate expects 3 arguments, 2 provided
src/core/attributes/date.hpp:9443:1: note: candidate 3: ‘template<class Parsable, class CharT, class Traits, class Alloc> decltype ((date::from_stream(declval<std::basic_istream<_CharT, _Traits>&>(), format.c_str(), tp, declval<std::__cxx11::basic_string<_CharT, _Traits, _Alloc>*>(), (& offset)), date::parse_manip<Parsable, CharT, Traits, Alloc>{format, tp, nullptr, (& offset)})) date::parse(const std::__cxx11::basic_string<_CharT, _Traits, _Alloc>&, Parsable&, std::chrono::minutes&)’
9443 | parse(const std::basic_string<CharT, Traits, Alloc>& format, Parsable& tp,
| ^~~~~
src/core/attributes/date.hpp:9443:1: note: candidate expects 3 arguments, 2 provided
src/core/attributes/date.hpp:9460:1: note: candidate 4: ‘template<class Parsable, class CharT, class Traits, class Alloc> decltype ((date::from_stream(declval<std::basic_istream<_CharT, _Traits>&>(), format.c_str(), tp, (& abbrev), (& offset)), date::parse_manip<Parsable, CharT, Traits, Alloc>{format, tp, (& abbrev), (& offset)})) date::parse(const std::__cxx11::basic_string<_CharT, _Traits, _Alloc>&, Parsable&, std::__cxx11::basic_string<_CharT, _Traits, _Alloc>&, std::chrono::minutes&)’
9460 | parse(const std::basic_string<CharT, Traits, Alloc>& format, Parsable& tp,
| ^~~~~
src/core/attributes/date.hpp:9460:1: note: candidate expects 4 arguments, 2 provided
src/core/attributes/date.hpp:9477:1: note: candidate 5: ‘template<class Parsable, class CharT> decltype ((date::from_stream(declval<std::basic_istream<CharT, std::char_traits<_CharT> >&>(), format, tp), date::parse_manip<Parsable, CharT>{format, tp})) date::parse(const CharT*, Parsable&)’
9477 | parse(const CharT* format, Parsable& tp)
| ^~~~~
src/core/attributes/date.hpp:9477:1: note: template argument deduction/substitution failed:
src/core/attributes/conversion.cpp:202:22: note: mismatched types ‘const CharT*’ and ‘std::__cxx11::basic_string<char>’
202 | in >> date::parse(format, result);
| ~~~~~~~~~~~^~~~~~~~~~~~~~~~
src/core/attributes/date.hpp:9490:1: note: candidate 6: ‘template<class Parsable, class CharT, class Traits, class Alloc> decltype ((date::from_stream(declval<std::basic_istream<_CharT, _Traits>&>(), format, tp, (& abbrev)), date::parse_manip<Parsable, CharT, Traits, Alloc>{format, tp, (& abbrev)})) date::parse(const CharT*, Parsable&, std::__cxx11::basic_string<_CharT, _Traits, _Alloc>&)’
9490 | parse(const CharT* format, Parsable& tp, std::basic_string<CharT, Traits, Alloc>& abbrev)
| ^~~~~
src/core/attributes/date.hpp:9490:1: note: candidate expects 3 arguments, 2 provided
src/core/attributes/date.hpp:9504:1: note: candidate 7: ‘template<class Parsable, class CharT> decltype ((date::from_stream(declval<std::basic_istream<CharT, std::char_traits<_CharT> >&>(), format, tp, declval<std::__cxx11::basic_string<_CharT, std::char_traits<_CharT>, std::allocator<_T2> >*>(), (& offset)), date::parse_manip<Parsable, CharT>{format, tp, nullptr, (& offset)})) date::parse(const CharT*, Parsable&, std::chrono::minutes&)’
9504 | parse(const CharT* format, Parsable& tp, std::chrono::minutes& offset)
| ^~~~~
src/core/attributes/date.hpp:9504:1: note: candidate expects 3 arguments, 2 provided
src/core/attributes/date.hpp:9518:1: note: candidate 8: ‘template<class Parsable, class CharT, class Traits, class Alloc> decltype ((date::from_stream(declval<std::basic_istream<_CharT, _Traits>&>(), format, tp, (& abbrev), (& offset)), date::parse_manip<Parsable, CharT, Traits, Alloc>{format, tp, (& abbrev), (& offset)})) date::parse(const CharT*, Parsable&, std::__cxx11::basic_string<_CharT, _Traits, _Alloc>&, std::chrono::minutes&)’
9518 | parse(const CharT* format, Parsable& tp,
| ^~~~~
src/core/attributes/date.hpp:9518:1: note: candidate expects 4 arguments, 2 provided
g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Isrc -Ilibs -Iboost -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c src/core/observers/ObserverStore.cpp -o src/core/observers/ObserverStore.o
make[1]: *** [/data/gannet/ripley/R/R-devel/etc/Makeconf:201: src/core/attributes/conversion.o] Error 1
g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Isrc -Ilibs -Iboost -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c src/generation/communities.cpp -o src/generation/communities.o
g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Isrc -Ilibs -Iboost -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c src/generation/erdos_renyi.cpp -o src/generation/erdos_renyi.o
g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Isrc -Ilibs -Iboost -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c src/generation/standard_graphs.cpp -o src/generation/standard_graphs.o
g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Isrc -Ilibs -Iboost -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c src/io/_impl/parser/mlpass2/parser.cpp -o src/io/_impl/parser/mlpass2/parser.o
g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Isrc -Ilibs -Iboost -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c src/io/_impl/parser/mlpass1/utility_functions.cpp -o src/io/_impl/parser/mlpass1/utility_functions.o
g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Isrc -Ilibs -Iboost -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c src/io/_impl/parser/mlpass1/parser.cpp -o src/io/_impl/parser/mlpass1/parser.o
g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Isrc -Ilibs -Iboost -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c src/io/_impl/read_common.cpp -o src/io/_impl/read_common.o
g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Isrc -Ilibs -Iboost -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c src/io/_impl/GraphIOFileSection.cpp -o src/io/_impl/GraphIOFileSection.o
g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Isrc -Ilibs -Iboost -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c src/io/read_network.cpp -o src/io/read_network.o
g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Isrc -Ilibs -Iboost -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c src/io/write_multilayer_network.cpp -o src/io/write_multilayer_network.o
g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Isrc -Ilibs -Iboost -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c src/io/read_probabilistic_network.cpp -o src/io/read_probabilistic_network.o
g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Isrc -Ilibs -Iboost -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c src/io/read_weighted_network.cpp -o src/io/read_weighted_network.o
g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Isrc -Ilibs -Iboost -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c src/io/read_multilayer_network.cpp -o src/io/read_multilayer_network.o
g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Isrc -Ilibs -Iboost -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c src/io/read_temporal_network.cpp -o src/io/read_temporal_network.o
g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Isrc -Ilibs -Iboost -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c src/layout/multiforce.cpp -o src/layout/multiforce.o
g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Isrc -Ilibs -Iboost -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c src/networks/MultilayerNetwork.cpp -o src/networks/MultilayerNetwork.o
g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Isrc -Ilibs -Iboost -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c src/networks/Network.cpp -o src/networks/Network.o
g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Isrc -Ilibs -Iboost -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c src/networks/_impl/stores/LayerStore.cpp -o src/networks/_impl/stores/LayerStore.o
g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Isrc -Ilibs -Iboost -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c src/networks/_impl/stores/MLECubeStore.cpp -o src/networks/_impl/stores/MLECubeStore.o
g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Isrc -Ilibs -Iboost -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c src/networks/_impl/stores/VertexStore.cpp -o src/networks/_impl/stores/VertexStore.o
g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Isrc -Ilibs -Iboost -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c src/networks/_impl/stores/SimpleEdgeStore.cpp -o src/networks/_impl/stores/SimpleEdgeStore.o
g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Isrc -Ilibs -Iboost -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c src/networks/_impl/stores/MultiEdgeStore.cpp -o src/networks/_impl/stores/MultiEdgeStore.o
g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Isrc -Ilibs -Iboost -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c src/networks/_impl/stores/EdgeStore.cpp -o src/networks/_impl/stores/EdgeStore.o
g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Isrc -Ilibs -Iboost -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c src/networks/_impl/observers/CheckVerticesExistObserver.cpp -o src/networks/_impl/observers/CheckVerticesExistObserver.o
g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Isrc -Ilibs -Iboost -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c src/networks/_impl/observers/NoLoopCheckObserver2.cpp -o src/networks/_impl/observers/NoLoopCheckObserver2.o
g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Isrc -Ilibs -Iboost -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c src/networks/OrderedMultiplexNetwork.cpp -o src/networks/OrderedMultiplexNetwork.o
g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Isrc -Ilibs -Iboost -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c src/networks/MultiNetwork.cpp -o src/networks/MultiNetwork.o
g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Isrc -Ilibs -Iboost -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c src/networks/weight.cpp -o src/networks/weight.o
g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Isrc -Ilibs -Iboost -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c src/networks/probability.cpp -o src/networks/probability.o
g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Isrc -Ilibs -Iboost -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c src/networks/time.cpp -o src/networks/time.o
g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Isrc -Ilibs -Iboost -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c src/objects/Dyad.cpp -o src/objects/Dyad.o
g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Isrc -Ilibs -Iboost -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c src/objects/Walk.cpp -o src/objects/Walk.o
g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Isrc -Ilibs -Iboost -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c src/objects/Triad.cpp -o src/objects/Triad.o
g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Isrc -Ilibs -Iboost -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c src/objects/Path.cpp -o src/objects/Path.o
g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Isrc -Ilibs -Iboost -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c src/objects/MLVertex.cpp -o src/objects/MLVertex.o
g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Isrc -Ilibs -Iboost -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c src/objects/Trail.cpp -o src/objects/Trail.o
g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Isrc -Ilibs -Iboost -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c src/objects/Vertex.cpp -o src/objects/Vertex.o
g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Isrc -Ilibs -Iboost -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c src/objects/Edge.cpp -o src/objects/Edge.o
g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Isrc -Ilibs -Iboost -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c src/olap/MECube.cpp -o src/olap/MECube.o
g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Isrc -Ilibs -Iboost -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c src/olap/indexing.cpp -o src/olap/indexing.o
g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Isrc -Ilibs -Iboost -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c src/olap/VCube.cpp -o src/olap/VCube.o
g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Isrc -Ilibs -Iboost -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c src/olap/sel/Indexes.cpp -o src/olap/sel/Indexes.o
g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Isrc -Ilibs -Iboost -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c src/olap/sel/Range.cpp -o src/olap/sel/Range.o
g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Isrc -Ilibs -Iboost -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c src/olap/sel/Set.cpp -o src/olap/sel/Set.o
g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Isrc -Ilibs -Iboost -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c src/olap/sel/All.cpp -o src/olap/sel/All.o
g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Isrc -Ilibs -Iboost -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c src/olap/sel/IndexIterator.cpp -o src/olap/sel/IndexIterator.o
g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Isrc -Ilibs -Iboost -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c src/olap/ECube.cpp -o src/olap/ECube.o
g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Isrc -Ilibs -Iboost -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c src/olap/time.cpp -o src/olap/time.o
g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Isrc -Ilibs -Iboost -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c src/operations/slice.cpp -o src/operations/slice.o
g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Isrc -Ilibs -Iboost -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c src/operations/sample.cpp -o src/operations/sample.o
g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Isrc -Ilibs -Iboost -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c src/utils/summary.cpp -o src/utils/summary.o
g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Isrc -Ilibs -Iboost -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c infomap/infomap/Network.cpp -o infomap/infomap/Network.o
infomap/infomap/Network.cpp: In member function ‘void infomap::Network::printParsingResult(bool)’:
infomap/infomap/Network.cpp:1259:18: warning: unused variable ‘numNodesIgnored’ [-Wunused-variable]
1259 | unsigned int numNodesIgnored = m_numNodesFound - m_numNodes;
| ^~~~~~~~~~~~~~~
g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Isrc -Ilibs -Iboost -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c infomap/infomap/FlowNetwork.cpp -o infomap/infomap/FlowNetwork.o
g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Isrc -Ilibs -Iboost -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c infomap/infomap/Node.cpp -o infomap/infomap/Node.o
g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Isrc -Ilibs -Iboost -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c infomap/infomap/TreeData.cpp -o infomap/infomap/TreeData.o
g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Isrc -Ilibs -Iboost -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c infomap/infomap/InfomapContext.cpp -o infomap/infomap/InfomapContext.o
In file included from infomap/infomap/InfomapGreedyTypeSpecialized.h:31,
from infomap/infomap/InfomapContext.cpp:30:
infomap/infomap/InfomapGreedyCommon.h:1022: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
1022 | #pragma omp parallel for schedule(dynamic) // Use dynamic scheduling as some threads could end early
infomap/infomap/InfomapGreedyCommon.h:1184: warning: ignoring ‘#pragma omp critical’ [-Wunknown-pragmas]
1184 | #pragma omp critical (moveUpdate)
g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Isrc -Ilibs -Iboost -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c infomap/infomap/NetworkAdapter.cpp -o infomap/infomap/NetworkAdapter.o
In file included from infomap/infomap/InfomapBase.h:33,
from infomap/infomap/Node.cpp:31:
infomap/infomap/../utils/MersenneTwister.h: In member function ‘void MTRand::reload()’:
infomap/infomap/../utils/MersenneTwister.h:333:17: warning: arithmetic between different enumeration types ‘MTRand::<unnamed enum>’ and ‘MTRand::<unnamed enum>’ is deprecated [-Wdeprecated-enum-enum-conversion]
333 | for ( i = N - M; i--; ++p )
| ~~^~~
infomap/infomap/../utils/MersenneTwister.h:340:24: warning: arithmetic between different enumeration types ‘MTRand::<unnamed enum>’ and ‘MTRand::<unnamed enum>’ is deprecated [-Wdeprecated-enum-enum-conversion]
340 | *p = twist( p[M-N], p[0], p[1] );
| ~^~
infomap/infomap/../utils/MersenneTwister.h:343:20: warning: arithmetic between different enumeration types ‘MTRand::<unnamed enum>’ and ‘MTRand::<unnamed enum>’ is deprecated [-Wdeprecated-enum-enum-conversion]
343 | *p = twist( p[M-N], p[0], state[0] );
| ~^~
In file included from infomap/infomap/InfomapBase.h:33,
from infomap/infomap/InfomapContext.h:31,
from infomap/infomap/InfomapContext.cpp:28:
infomap/infomap/../utils/MersenneTwister.h: In member function ‘void MTRand::reload()’:
infomap/infomap/../utils/MersenneTwister.h:333:17: warning: arithmetic between different enumeration types ‘MTRand::<unnamed enum>’ and ‘MTRand::<unnamed enum>’ is deprecated [-Wdeprecated-enum-enum-conversion]
333 | for ( i = N - M; i--; ++p )
| ~~^~~
infomap/infomap/../utils/MersenneTwister.h:340:24: warning: arithmetic between different enumeration types ‘MTRand::<unnamed enum>’ and ‘MTRand::<unnamed enum>’ is deprecated [-Wdeprecated-enum-enum-conversion]
340 | *p = twist( p[M-N], p[0], p[1] );
| ~^~
infomap/infomap/../utils/MersenneTwister.h:343:20: warning: arithmetic between different enumeration types ‘MTRand::<unnamed enum>’ and ‘MTRand::<unnamed enum>’ is deprecated [-Wdeprecated-enum-enum-conversion]
343 | *p = twist( p[M-N], p[0], state[0] );
| ~^~
g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Isrc -Ilibs -Iboost -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c infomap/infomap/MultiplexNetwork.cpp -o infomap/infomap/MultiplexNetwork.o
g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Isrc -Ilibs -Iboost -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c infomap/infomap/MemoryNetworkAdapter.cpp -o infomap/infomap/MemoryNetworkAdapter.o
In file included from infomap/infomap/../utils/infomath.h:33,
from infomap/infomap/MultiplexNetwork.cpp:39:
infomap/infomap/../utils/MersenneTwister.h: In member function ‘void MTRand::reload()’:
infomap/infomap/../utils/MersenneTwister.h:333:17: warning: arithmetic between different enumeration types ‘MTRand::<unnamed enum>’ and ‘MTRand::<unnamed enum>’ is deprecated [-Wdeprecated-enum-enum-conversion]
333 | for ( i = N - M; i--; ++p )
| ~~^~~
infomap/infomap/../utils/MersenneTwister.h:340:24: warning: arithmetic between different enumeration types ‘MTRand::<unnamed enum>’ and ‘MTRand::<unnamed enum>’ is deprecated [-Wdeprecated-enum-enum-conversion]
340 | *p = twist( p[M-N], p[0], p[1] );
| ~^~
infomap/infomap/../utils/MersenneTwister.h:343:20: warning: arithmetic between different enumeration types ‘MTRand::<unnamed enum>’ and ‘MTRand::<unnamed enum>’ is deprecated [-Wdeprecated-enum-enum-conversion]
343 | *p = twist( p[M-N], p[0], state[0] );
| ~^~
g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Isrc -Ilibs -Iboost -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c infomap/infomap/MemNetwork.cpp -o infomap/infomap/MemNetwork.o
infomap/infomap/MemNetwork.cpp: In member function ‘void infomap::MemNetwork::simulateMemoryToIncompleteData()’:
infomap/infomap/MemNetwork.cpp:525:18: warning: unused variable ‘numStateLinksBefore’ [-Wunused-variable]
525 | unsigned int numStateLinksBefore = m_numStateLinks;
| ^~~~~~~~~~~~~~~~~~~
infomap/infomap/MemNetwork.cpp:528:18: warning: unused variable ‘numAggregatedLinksBefore’ [-Wunused-variable]
528 | unsigned int numAggregatedLinksBefore = m_numAggregatedStateLinks;
| ^~~~~~~~~~~~~~~~~~~~~~~~
g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Isrc -Ilibs -Iboost -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c infomap/infomap/MemFlowNetwork.cpp -o infomap/infomap/MemFlowNetwork.o
infomap/infomap/MultiplexNetwork.cpp: In member function ‘std::map<unsigned int, double>::const_iterator* infomap::MultiplexNetwork::getUndirLinkItPtr(std::vector<std::pair<std::_Rb_tree_const_iterator<std::pair<const unsigned int, double> >, std::_Rb_tree_const_iterator<std::pair<const unsigned int, double> > > >&)’:
infomap/infomap/MultiplexNetwork.cpp:1090:12: warning: ‘linkIt’ may be used uninitialized [-Wmaybe-uninitialized]
1090 | return linkIt;
| ^~~~~~
infomap/infomap/MultiplexNetwork.cpp:1068:35: note: ‘linkIt’ was declared here
1068 | IntraLinkMap::const_iterator *linkIt;
| ^~~~~~
g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Isrc -Ilibs -Iboost -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c infomap/infomap/InfomapBase.cpp -o infomap/infomap/InfomapBase.o
infomap/infomap/InfomapBase.cpp:1109:8: warning: multi-line comment [-Wcomment]
1109 | //Log(0,1) << hideIf(!acceptSolution) << ((hierarchicalCodelength - workingHierarchicalCodelength) \
| ^
infomap/infomap/InfomapBase.cpp:1949: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
1949 | #pragma omp parallel for schedule(dynamic)
In file included from infomap/infomap/InfomapBase.h:33,
from infomap/infomap/InfomapBase.cpp:28:
infomap/infomap/../utils/MersenneTwister.h: In member function ‘void MTRand::reload()’:
infomap/infomap/../utils/MersenneTwister.h:333:17: warning: arithmetic between different enumeration types ‘MTRand::<unnamed enum>’ and ‘MTRand::<unnamed enum>’ is deprecated [-Wdeprecated-enum-enum-conversion]
333 | for ( i = N - M; i--; ++p )
| ~~^~~
infomap/infomap/../utils/MersenneTwister.h:340:24: warning: arithmetic between different enumeration types ‘MTRand::<unnamed enum>’ and ‘MTRand::<unnamed enum>’ is deprecated [-Wdeprecated-enum-enum-conversion]
340 | *p = twist( p[M-N], p[0], p[1] );
| ~^~
infomap/infomap/../utils/MersenneTwister.h:343:20: warning: arithmetic between different enumeration types ‘MTRand::<unnamed enum>’ and ‘MTRand::<unnamed enum>’ is deprecated [-Wdeprecated-enum-enum-conversion]
343 | *p = twist( p[M-N], p[0], state[0] );
| ~^~
infomap/infomap/InfomapBase.cpp: In member function ‘void infomap::InfomapBase::run(infomap::HierarchicalNetwork&)’:
infomap/infomap/InfomapBase.cpp:329:28: warning: unused variable ‘s’ [-Wunused-variable]
329 | PerIterationStats& s = m_iterationStats[i];
| ^
infomap/infomap/InfomapBase.cpp:372:22: warning: unused variable ‘numFields’ [-Wunused-variable]
372 | unsigned int numFields = 5 + ((2 + (m_config.isMemoryNetwork() ? 1 : 0)) * (m_config.twoLevel ? 1 : 2));
| ^~~~~~~~~
infomap/infomap/InfomapBase.cpp:376:16: warning: unused variable ‘secondsMin’ [-Wunused-variable]
376 | double secondsMin = m_iterationStats[0].seconds;
| ^~~~~~~~~~
infomap/infomap/InfomapBase.cpp:377:16: warning: unused variable ‘secondsMax’ [-Wunused-variable]
377 | double secondsMax = m_iterationStats[iLast].seconds;
| ^~~~~~~~~~
infomap/infomap/InfomapBase.cpp:378:16: warning: unused variable ‘secondsMedian’ [-Wunused-variable]
378 | double secondsMedian = m_iterationStats[numTrials / 2].seconds;
| ^~~~~~~~~~~~~
infomap/infomap/InfomapBase.cpp:379:16: warning: unused variable ‘secondsAverage’ [-Wunused-variable]
379 | double secondsAverage = std::accumulate(m_iterationStats.begin(),
| ^~~~~~~~~~~~~~
infomap/infomap/InfomapBase.cpp:383:22: warning: unused variable ‘numTopModulesMin’ [-Wunused-variable]
383 | unsigned int numTopModulesMin = m_iterationStats[0].numTopModules;
| ^~~~~~~~~~~~~~~~
infomap/infomap/InfomapBase.cpp:384:22: warning: unused variable ‘numTopModulesMax’ [-Wunused-variable]
384 | unsigned int numTopModulesMax = m_iterationStats[iLast].numTopModules;
| ^~~~~~~~~~~~~~~~
infomap/infomap/InfomapBase.cpp:385:22: warning: unused variable ‘numTopModulesMedian’ [-Wunused-variable]
385 | unsigned int numTopModulesMedian = m_iterationStats[numTrials / 2].numTopModules;
| ^~~~~~~~~~~~~~~~~~~
infomap/infomap/InfomapBase.cpp:386:16: warning: unused variable ‘numTopModulesAverage’ [-Wunused-variable]
386 | double numTopModulesAverage = std::accumulate(m_iterationStats.begin(),
| ^~~~~~~~~~~~~~~~~~~~
infomap/infomap/InfomapBase.cpp:390:16: warning: unused variable ‘topPerplexityMin’ [-Wunused-variable]
390 | double topPerplexityMin = m_iterationStats[0].topPerplexity;
| ^~~~~~~~~~~~~~~~
infomap/infomap/InfomapBase.cpp:391:16: warning: unused variable ‘topPerplexityMax’ [-Wunused-variable]
391 | double topPerplexityMax = m_iterationStats[iLast].topPerplexity;
| ^~~~~~~~~~~~~~~~
infomap/infomap/InfomapBase.cpp:392:16: warning: unused variable ‘topPerplexityMedian’ [-Wunused-variable]
392 | double topPerplexityMedian = m_iterationStats[numTrials / 2].topPerplexity;
| ^~~~~~~~~~~~~~~~~~~
infomap/infomap/InfomapBase.cpp:393:16: warning: unused variable ‘topPerplexityAverage’ [-Wunused-variable]
393 | double topPerplexityAverage = std::accumulate(m_iterationStats.begin(),
| ^~~~~~~~~~~~~~~~~~~~
infomap/infomap/InfomapBase.cpp:397:16: warning: unused variable ‘topOverlapMin’ [-Wunused-variable]
397 | double topOverlapMin = m_iterationStats[0].topOverlap;
| ^~~~~~~~~~~~~
infomap/infomap/InfomapBase.cpp:398:16: warning: unused variable ‘topOverlapMax’ [-Wunused-variable]
398 | double topOverlapMax = m_iterationStats[iLast].topOverlap;
| ^~~~~~~~~~~~~
infomap/infomap/InfomapBase.cpp:399:16: warning: unused variable ‘topOverlapMedian’ [-Wunused-variable]
399 | double topOverlapMedian = m_iterationStats[numTrials / 2].topOverlap;
| ^~~~~~~~~~~~~~~~
infomap/infomap/InfomapBase.cpp:400:16: warning: unused variable ‘topOverlapAverage’ [-Wunused-variable]
400 | double topOverlapAverage = std::accumulate(m_iterationStats.begin(),
| ^~~~~~~~~~~~~~~~~
infomap/infomap/InfomapBase.cpp:404:22: warning: unused variable ‘numBottomModulesMin’ [-Wunused-variable]
404 | unsigned int numBottomModulesMin = m_iterationStats[0].numBottomModules;
| ^~~~~~~~~~~~~~~~~~~
infomap/infomap/InfomapBase.cpp:405:22: warning: unused variable ‘numBottomModulesMax’ [-Wunused-variable]
405 | unsigned int numBottomModulesMax = m_iterationStats[iLast].numBottomModules;
| ^~~~~~~~~~~~~~~~~~~
infomap/infomap/InfomapBase.cpp:406:22: warning: unused variable ‘numBottomModulesMedian’ [-Wunused-variable]
406 | unsigned int numBottomModulesMedian = m_iterationStats[numTrials / 2].numBottomModules;
| ^~~~~~~~~~~~~~~~~~~~~~
infomap/infomap/InfomapBase.cpp:407:16: warning: unused variable ‘numBottomModulesAverage’ [-Wunused-variable]
407 | double numBottomModulesAverage = std::accumulate(m_iterationStats.begin(),
| ^~~~~~~~~~~~~~~~~~~~~~~
infomap/infomap/InfomapBase.cpp:411:16: warning: unused variable ‘bottomPerplexityMin’ [-Wunused-variable]
411 | double bottomPerplexityMin = m_iterationStats[0].bottomPerplexity;
| ^~~~~~~~~~~~~~~~~~~
infomap/infomap/InfomapBase.cpp:412:16: warning: unused variable ‘bottomPerplexityMax’ [-Wunused-variable]
412 | double bottomPerplexityMax = m_iterationStats[iLast].bottomPerplexity;
| ^~~~~~~~~~~~~~~~~~~
infomap/infomap/InfomapBase.cpp:413:16: warning: unused variable ‘bottomPerplexityMedian’ [-Wunused-variable]
413 | double bottomPerplexityMedian = m_iterationStats[numTrials / 2].bottomPerplexity;
| ^~~~~~~~~~~~~~~~~~~~~~
infomap/infomap/InfomapBase.cpp:414:16: warning: unused variable ‘bottomPerplexityAverage’ [-Wunused-variable]
414 | double bottomPerplexityAverage = std::accumulate(m_iterationStats.begin(),
| ^~~~~~~~~~~~~~~~~~~~~~~
infomap/infomap/InfomapBase.cpp:418:16: warning: unused variable ‘bottomOverlapMin’ [-Wunused-variable]
418 | double bottomOverlapMin = m_iterationStats[0].bottomOverlap;
| ^~~~~~~~~~~~~~~~
infomap/infomap/InfomapBase.cpp:419:16: warning: unused variable ‘bottomOverlapMax’ [-Wunused-variable]
419 | double bottomOverlapMax = m_iterationStats[iLast].bottomOverlap;
| ^~~~~~~~~~~~~~~~
infomap/infomap/InfomapBase.cpp:420:16: warning: unused variable ‘bottomOverlapMedian’ [-Wunused-variable]
420 | double bottomOverlapMedian = m_iterationStats[numTrials / 2].bottomOverlap;
| ^~~~~~~~~~~~~~~~~~~
infomap/infomap/InfomapBase.cpp:421:16: warning: unused variable ‘bottomOverlapAverage’ [-Wunused-variable]
421 | double bottomOverlapAverage = std::accumulate(m_iterationStats.begin(),
| ^~~~~~~~~~~~~~~~~~~~
infomap/infomap/InfomapBase.cpp:425:22: warning: unused variable ‘maxDepthMin’ [-Wunused-variable]
425 | unsigned int maxDepthMin = m_iterationStats[0].maxDepth;
| ^~~~~~~~~~~
infomap/infomap/InfomapBase.cpp:426:22: warning: unused variable ‘maxDepthMax’ [-Wunused-variable]
426 | unsigned int maxDepthMax = m_iterationStats[iLast].maxDepth;
| ^~~~~~~~~~~
infomap/infomap/InfomapBase.cpp:427:22: warning: unused variable ‘maxDepthMedian’ [-Wunused-variable]
427 | unsigned int maxDepthMedian = m_iterationStats[numTrials / 2].maxDepth;
| ^~~~~~~~~~~~~~
infomap/infomap/InfomapBase.cpp:428:16: warning: unused variable ‘maxDepthAverage’ [-Wunused-variable]
428 | double maxDepthAverage = std::accumulate(m_iterationStats.begin(),
| ^~~~~~~~~~~~~~~
infomap/infomap/InfomapBase.cpp:432:16: warning: unused variable ‘weightedDepthMin’ [-Wunused-variable]
432 | double weightedDepthMin = m_iterationStats[0].weightedDepth;
| ^~~~~~~~~~~~~~~~
infomap/infomap/InfomapBase.cpp:433:16: warning: unused variable ‘weightedDepthMax’ [-Wunused-variable]
433 | double weightedDepthMax = m_iterationStats[iLast].weightedDepth;
| ^~~~~~~~~~~~~~~~
infomap/infomap/InfomapBase.cpp:434:16: warning: unused variable ‘weightedDepthMedian’ [-Wunused-variable]
434 | double weightedDepthMedian = m_iterationStats[numTrials / 2].weightedDepth;
| ^~~~~~~~~~~~~~~~~~~
infomap/infomap/InfomapBase.cpp:435:16: warning: unused variable ‘weightedDepthAverage’ [-Wunused-variable]
435 | double weightedDepthAverage = std::accumulate(m_iterationStats.begin(),
| ^~~~~~~~~~~~~~~~~~~~
infomap/infomap/InfomapBase.cpp:439:16: warning: unused variable ‘codelengthMin’ [-Wunused-variable]
439 | double codelengthMin = m_iterationStats[0].codelength;
| ^~~~~~~~~~~~~
infomap/infomap/InfomapBase.cpp:440:16: warning: unused variable ‘codelengthMax’ [-Wunused-variable]
440 | double codelengthMax = m_iterationStats[iLast].codelength;
| ^~~~~~~~~~~~~
infomap/infomap/InfomapBase.cpp:441:16: warning: unused variable ‘codelengthMedian’ [-Wunused-variable]
441 | double codelengthMedian = m_iterationStats[numTrials / 2].codelength;
| ^~~~~~~~~~~~~~~~
infomap/infomap/InfomapBase.cpp:442:16: warning: unused variable ‘codelengthAverage’ [-Wunused-variable]
442 | double codelengthAverage = std::accumulate(m_iterationStats.begin(),
| ^~~~~~~~~~~~~~~~~
infomap/infomap/InfomapBase.cpp:128:18: warning: variable ‘bestNumLevels’ set but not used [-Wunused-but-set-variable]
128 | unsigned int bestNumLevels = 0;
| ^~~~~~~~~~~~~
infomap/infomap/InfomapBase.cpp:270:18: warning: unused variable ‘fieldWidth’ [-Wunused-variable]
270 | unsigned int fieldWidth = 16;
| ^~~~~~~~~~
g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Isrc -Ilibs -Iboost -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c infomap/io/HierarchicalNetwork.cpp -o infomap/io/HierarchicalNetwork.o
infomap/infomap/InfomapBase.cpp: In member function ‘unsigned int infomap::InfomapBase::findSuperModulesIterativelyFast(infomap::PartitionQueue&)’:
infomap/infomap/InfomapBase.cpp:1096:22: warning: unused variable ‘numOptimizationLoops’ [-Wunused-variable]
1096 | unsigned int numOptimizationLoops = optimizeModules();
| ^~~~~~~~~~~~~~~~~~~~
infomap/infomap/InfomapBase.cpp:1066:18: warning: unused variable ‘networkLevel’ [-Wunused-variable]
1066 | unsigned int networkLevel = 0;
| ^~~~~~~~~~~~
infomap/infomap/InfomapBase.cpp: In member function ‘void infomap::InfomapBase::partition(unsigned int, bool, bool)’:
infomap/infomap/InfomapBase.cpp:1468:12: warning: variable ‘compression’ set but not used [-Wunused-but-set-variable]
1468 | double compression = (oldCodelength - codelength)/oldCodelength;
| ^~~~~~~~~~~
infomap/infomap/InfomapBase.cpp: In member function ‘void infomap::InfomapBase::mergeAndConsolidateRepeatedly(bool, bool)’:
infomap/infomap/InfomapBase.cpp:1597:22: warning: unused variable ‘numFastLoops’ [-Wunused-variable]
1597 | unsigned int numFastLoops = optimizeModulesCrude();
| ^~~~~~~~~~~~
infomap/infomap/InfomapBase.cpp:1623:18: warning: variable ‘numOptimizationLoops’ set but not used [-Wunused-but-set-variable]
1623 | unsigned int numOptimizationLoops = optimizeModules();
| ^~~~~~~~~~~~~~~~~~~~
infomap/infomap/InfomapBase.cpp: In member function ‘void infomap::InfomapBase::printNetworkData(infomap::HierarchicalNetwork&, std::string)’:
infomap/infomap/InfomapBase.cpp:2627:14: warning: unused variable ‘writeEdges’ [-Wunused-variable]
2627 | bool writeEdges = m_config.printBinaryFlowTree || m_config.printFlowTree || m_config.printMap || m_externalOutput;
| ^~~~~~~~~~
g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Isrc -Ilibs -Iboost -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c infomap/io/TreeDataWriter.cpp -o infomap/io/TreeDataWriter.o
g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Isrc -Ilibs -Iboost -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c infomap/io/BipartiteClusterReader.cpp -o infomap/io/BipartiteClusterReader.o
g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Isrc -Ilibs -Iboost -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c infomap/io/version.cpp -o infomap/io/version.o
g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Isrc -Ilibs -Iboost -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c infomap/io/ClusterReader.cpp -o infomap/io/ClusterReader.o
g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Isrc -Ilibs -Iboost -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c infomap/io/ProgramInterface.cpp -o infomap/io/ProgramInterface.o
g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Isrc -Ilibs -Iboost -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c infomap/utils/FileURI.cpp -o infomap/utils/FileURI.o
infomap/io/ProgramInterface.cpp: In member function ‘void infomap::ProgramInterface::exitWithUsage(bool)’:
infomap/io/ProgramInterface.cpp:128:32: warning: unused variable ‘numSpaces’ [-Wunused-variable]
128 | std::string::size_type numSpaces = maxLength + 3 - optionStrings[i].length();
| ^~~~~~~~~
g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DCRAN -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Isrc -Ilibs -Iboost -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c infomap/utils/Logger.cpp -o infomap/utils/Logger.o
make[1]: Target 'all' not remade because of errors.
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/multinet/src'
ERROR: compilation failed for package ‘multinet’
* removing ‘/data/gannet/ripley/R/packages/tests-devel/multinet.Rcheck/multinet’