* installing *source* package ‘msgps’ ...
** package ‘msgps’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C compiler: ‘gcc-13 (GCC) 13.2.0’
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/msgps/src'
gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG   -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes  -c GPS_v3.2.c -o GPS_v3.2.o
GPS_v3.2.c: In function 'gps':
GPS_v3.2.c:71:13: warning: variable 'flag_St' set but not used [-Wunused-but-set-variable]
   71 |         int flag_St;
      |             ^~~~~~~
GPS_v3.2.c: In function 'cvgps':
GPS_v3.2.c:433:13: warning: variable 'flag_St' set but not used [-Wunused-but-set-variable]
  433 |         int flag_St;
      |             ^~~~~~~
GPS_v3.2.c: In function 'DFMODIFIED2':
GPS_v3.2.c:1195:13: warning: variable 'flag_BtBt0' set but not used [-Wunused-but-set-variable]
 1195 |         int flag_BtBt0;
      |             ^~~~~~~~~~
GPS_v3.2.c: In function 'gps':
GPS_v3.2.c:362:107: warning: 'temp' may be used uninitialized [-Wmaybe-uninitialized]
  362 |                 REAL(tuning_stand)[step0] = REAL(tuning_stand)[step0-1] + REAL(ex_standardize_vec)[jstar] * temp;
      |                                                                           ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~
GPS_v3.2.c:93:16: note: 'temp' was declared here
   93 |         double temp;
      |                ^~~~
gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG   -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes  -c registerDynamicSymbol.c -o registerDynamicSymbol.o
gcc-13 -shared -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -fpic -L/usr/local/gcc13/lib64 -L/usr/local/lib64 -L/usr/local/clang18/lib/x86_64-unknown-linux-gnu -o msgps.so GPS_v3.2.o registerDynamicSymbol.o -llapack -L/data/gannet/ripley/R/R-devel/lib -lRblas -lgfortran -lm -lquadmath
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/msgps/src'
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/msgps/src'
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/msgps/src'
installing to /data/gannet/ripley/R/packages/tests-devel/msgps.Rcheck/00LOCK-msgps/00new/msgps/libs
** R
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (msgps)