* installing *source* package ‘mpath’ ...
** package ‘mpath’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C compiler: ‘gcc-13 (GCC) 13.2.0’
using Fortran compiler: ‘GNU Fortran (GCC) 13.2.0’
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/mpath/src'
gfortran-13  -fpic  -g -O2 -mtune=native -Wall -pedantic  -c activeset.f -o activeset.o
gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG   -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes  -c cfuns.c -o cfuns.o
gfortran-13  -fpic  -g -O2 -mtune=native -Wall -pedantic  -c compute_g.f -o compute_g.o
compute_g.f:41:14:

   41 |            if(z(i) .LE. s1)then
      |              ^
Warning: 's1' may be used uninitialized [-Wmaybe-uninitialized]
compute_g.f:7:40:

    7 |               double precision PI, s, s1, s2, z(n), delta, gval(n)
      |                                        ^
note: 's1' was declared here
gfortran-13  -fpic  -g -O2 -mtune=native -Wall -pedantic  -c compute_h.f -o compute_h.o
gfortran-13  -fpic  -g -O2 -mtune=native -Wall -pedantic  -c compute_u.f -o compute_u.o
gfortran-13  -fpic  -g -O2 -mtune=native -Wall -pedantic  -c compute_v.f -o compute_v.o
gfortran-13  -fpic  -g -O2 -mtune=native -Wall -pedantic  -c compute_wt3.f -o compute_wt3.o
gfortran-13  -fpic  -g -O2 -mtune=native -Wall -pedantic  -c compute_z.f -o compute_z.o
gfortran-13  -fpic  -g -O2 -mtune=native -Wall -pedantic  -c dnbinom.f -o dnbinom.o
gfortran-13  -fpic  -g -O2 -mtune=native -Wall -pedantic  -c dpois.f -o dpois.o
gfortran-13  -fpic  -g -O2 -mtune=native -Wall -pedantic  -c factorial.f -o factorial.o
gfortran-13  -fpic  -g -O2 -mtune=native -Wall -pedantic  -c gfunc.f -o gfunc.o
gfortran-13  -fpic  -g -O2 -mtune=native -Wall -pedantic  -c glmreg_fit_fortran.f -o glmreg_fit_fortran.o
gfortran-13  -fpic  -g -O2 -mtune=native -Wall -pedantic  -c glmregnb_fortran.f -o glmregnb_fortran.o
gfortran-13  -fpic  -g -O2 -mtune=native -Wall -pedantic  -c gradient.f -o gradient.o
gfortran-13  -fpic  -g -O2 -mtune=native -Wall -pedantic  -c init.f -o init.o
gfortran-13  -fpic  -g -O2 -mtune=native -Wall -pedantic  -c irglmreg_ad.f -o irglmreg_ad.o
gfortran-13  -fpic  -g -O2 -mtune=native -Wall -pedantic  -c irglmreg_fortran.f -o irglmreg_fortran.o
gfortran-13  -fpic  -g -O2 -mtune=native -Wall -pedantic  -c irglmreg_onelambda.f -o irglmreg_onelambda.o
gfortran-13  -fpic  -g -O2 -mtune=native -Wall -pedantic  -c lmax_zipath.f -o lmax_zipath.o
gfortran-13  -fpic  -g -O2 -mtune=native -Wall -pedantic  -c lmnetGLM.f -o lmnetGLM.o
gfortran-13  -fpic  -g -O2 -mtune=native -Wall -pedantic  -c lmnetGaussian.f -o lmnetGaussian.o
gfortran-13  -fpic  -g -O2 -mtune=native -Wall -pedantic  -c loss.f -o loss.o
gfortran-13  -fpic  -g -O2 -mtune=native -Wall -pedantic  -c loss2.f -o loss2.o
gfortran-13  -fpic  -g -O2 -mtune=native -Wall -pedantic  -c loss2_ccsvm.f -o loss2_ccsvm.o
gfortran-13  -fpic  -g -O2 -mtune=native -Wall -pedantic  -c loss3.f -o loss3.o
gfortran-13  -fpic  -g -O2 -mtune=native -Wall -pedantic  -c midloop.f -o midloop.o
gfortran-13  -fpic  -g -O2 -mtune=native -Wall -pedantic  -c midloopGLM.f -o midloopGLM.o
gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG   -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes  -c mpath_init.c -o mpath_init.o
gfortran-13  -fpic  -g -O2 -mtune=native -Wall -pedantic  -c mutil.f -o mutil.o
gfortran-13  -fpic  -g -O2 -mtune=native -Wall -pedantic  -c nclreg_ad.f -o nclreg_ad.o
gfortran-13  -fpic  -g -O2 -mtune=native -Wall -pedantic  -c nclreg_fortran.f -o nclreg_fortran.o
gfortran-13  -fpic  -g -O2 -mtune=native -Wall -pedantic  -c nclreg_onelambda.f -o nclreg_onelambda.o
gfortran-13  -fpic  -g -O2 -mtune=native -Wall -pedantic  -c outloop.f -o outloop.o
gfortran-13  -fpic  -g -O2 -mtune=native -Wall -pedantic  -c outprod.f -o outprod.o
gfortran-13  -fpic  -g -O2 -mtune=native -Wall -pedantic  -c theta_ml.f -o theta_ml.o
gfortran-13  -fpic  -g -O2 -mtune=native -Wall -pedantic  -c update_wt.f -o update_wt.o
gfortran-13  -fpic  -g -O2 -mtune=native -Wall -pedantic  -c update_wt_ccsvm.f -o update_wt_ccsvm.o
gfortran-13  -fpic  -g -O2 -mtune=native -Wall -pedantic  -c zi_onelambda.f -o zi_onelambda.o
gfortran-13  -fpic  -g -O2 -mtune=native -Wall -pedantic  -c ziloss.f -o ziloss.o
gfortran-13  -fpic  -g -O2 -mtune=native -Wall -pedantic  -c zipath_active.f -o zipath_active.o
gfortran-13  -fpic  -g -O2 -mtune=native -Wall -pedantic  -c zipath_nonactive.f -o zipath_nonactive.o
gcc-13 -shared -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -fpic -L/usr/local/gcc13/lib64 -L/usr/local/lib64 -L/usr/local/clang18/lib/x86_64-unknown-linux-gnu -o mpath.so activeset.o cfuns.o compute_g.o compute_h.o compute_u.o compute_v.o compute_wt3.o compute_z.o dnbinom.o dpois.o factorial.o gfunc.o glmreg_fit_fortran.o glmregnb_fortran.o gradient.o init.o irglmreg_ad.o irglmreg_fortran.o irglmreg_onelambda.o lmax_zipath.o lmnetGLM.o lmnetGaussian.o loss.o loss2.o loss2_ccsvm.o loss3.o midloop.o midloopGLM.o mpath_init.o mutil.o nclreg_ad.o nclreg_fortran.o nclreg_onelambda.o outloop.o outprod.o theta_ml.o update_wt.o update_wt_ccsvm.o zi_onelambda.o ziloss.o zipath_active.o zipath_nonactive.o -llapack -L/data/gannet/ripley/R/R-devel/lib -lRblas -lgfortran -lm -lquadmath -lgfortran -lm -lquadmath
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/mpath/src'
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/mpath/src'
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/mpath/src'
installing to /data/gannet/ripley/R/packages/tests-devel/mpath.Rcheck/00LOCK-mpath/00new/mpath/libs
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (mpath)