• using R Under development (unstable) (2023-12-01 r85656)
• using platform: x86_64-pc-linux-gnu
• R was compiled by     gcc-13 (GCC) 13.2.0     GNU Fortran (GCC) 13.2.0
• running under: Fedora Linux 36 (Workstation Edition)
• using session charset: UTF-8
• using option ‘--no-stop-on-test-error’
• checking for file ‘mlr3pipelines/DESCRIPTION’ ... OK
• this is package ‘mlr3pipelines’ version ‘0.5.0-1’
• package encoding: UTF-8
• checking package namespace information ... OK
• checking package dependencies ... OK
• checking if this is a source package ... OK
• checking if there is a namespace ... OK
• checking for executable files ... OK
• checking for hidden files and directories ... OK
• checking for portable file names ... OK
• checking for sufficient/correct file permissions ... OK
• checking whether package ‘mlr3pipelines’ can be installed ... [48s/66s] OK See the install log for details.
• checking package directory ... OK
• checking ‘build’ directory ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking for left-over files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking R files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... OK
• checking whether the package can be loaded with stated dependencies ... OK
• checking whether the package can be unloaded cleanly ... OK
• checking whether the namespace can be loaded with stated dependencies ... OK
• checking whether the namespace can be unloaded cleanly ... OK
• checking loading without being on the library search path ... OK
• checking whether startup messages can be suppressed ... OK
• checking use of S3 registration ... OK
• checking dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... [119s/153s] OK
• checking Rd files ... OK
• checking Rd metadata ... OK
• checking Rd line widths ... OK
• checking Rd cross-references ... OK
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking Rd contents ... OK
• checking for unstated dependencies in examples ... OK
• checking installed files from ‘inst/doc’ ... OK
• checking files in ‘vignettes’ ... OK
• checking examples ... [24s/29s] ERROR Running examples in ‘mlr3pipelines-Ex.R’ failed The error most likely occurred in: > ### Name: mlr_pipeops_colroles > ### Title: Change Column Roles of a Task > ### Aliases: mlr_pipeops_colroles PipeOpColRoles > > ### ** Examples > > library("mlr3") > > task = tsk("boston_housing") > pop = po("colroles", param_vals = list( + new_role = list(cmedv = "order") + )) > > pop$train(list(task)) Error: Cannot change the role of a target. This happened PipeOp colroles's $train() Execution halted
• checking for unstated dependencies in ‘tests’ ... OK
• checking tests ... [404s/202s] ERROR   Running ‘testthat.R’ [403s/201s] Running the tests in ‘tests/testthat.R’ failed. Complete output:   > if (requireNamespace("testthat", quietly = TRUE)) {   + library("checkmate")   + library("testthat")   + library("mlr3")   + library("paradox")   + library("mlr3pipelines")   + test_check("mlr3pipelines")   + }   Starting 2 test processes   [ FAIL 3 | WARN 9 | SKIP 79 | PASS 12916 ]      ══ Skipped tests (79) ══════════════════════════════════════════════════════════   • On CRAN (77): 'test_Graph.R:275:3', 'test_GraphLearner.R:4:3',     'test_GraphLearner.R:177:3', 'test_GraphLearner.R:245:3',     'test_GraphLearner.R:309:3', 'test_dictionary.R:5:3',     'test_learner_weightedaverage.R:4:3', 'test_learner_weightedaverage.R:56:3',     'test_learner_weightedaverage.R:103:3',     'test_learner_weightedaverage.R:149:3', 'test_meta.R:39:3',     'test_mlr_graphs_bagging.R:5:3', 'test_mlr_graphs_branching.R:25:3',     'test_mlr_graphs_robustify.R:4:3', 'test_pipeop_branch.R:4:3',     'test_pipeop_chunk.R:4:3', 'test_pipeop_classbalancing.R:10:3',     'test_pipeop_boxcox.R:8:3', 'test_pipeop_classweights.R:10:3',     'test_pipeop_colroles.R:10:3', 'test_pipeop_colapply.R:9:3',     'test_pipeop_copy.R:5:3', 'test_pipeop_encode.R:21:3',     'test_pipeop_encodeimpact.R:11:3', 'test_pipeop_datefeatures.R:13:3',     'test_pipeop_encodelmer.R:13:3', 'test_pipeop_encodelmer.R:34:3',     'test_pipeop_encodelmer.R:75:3', 'test_pipeop_featureunion.R:9:3',     'test_pipeop_featureunion.R:132:3', 'test_pipeop_ensemble.R:6:3',     'test_pipeop_filter.R:6:3', 'test_pipeop_fixfactors.R:9:3',     'test_pipeop_ica.R:6:3', 'test_pipeop_histbin.R:9:3',     'test_pipeop_impute.R:4:3', 'test_pipeop_kernelpca.R:9:3',     'test_pipeop_imputelearner.R:40:3', 'test_pipeop_learner.R:17:3',     'test_pipeop_missind.R:6:3', 'test_pipeop_modelmatrix.R:7:3',     'test_pipeop_multiplicityexply.R:9:3', 'test_pipeop_learnercv.R:31:3',     'test_pipeop_mutate.R:9:3', 'test_pipeop_multiplicityimply.R:9:3',     'test_pipeop_ovr.R:9:3', 'test_pipeop_ovr.R:48:3', 'test_pipeop_pca.R:8:3',     'test_pipeop_nmf.R:9:3', 'test_pipeop_quantilebin.R:5:3',     'test_pipeop_randomprojection.R:8:3', 'test_pipeop_randomresponse.R:5:3',     'test_pipeop_proxy.R:14:3', 'test_pipeop_removeconstants.R:10:3',     'test_pipeop_renamecolumns.R:11:3', 'test_pipeop_replicate.R:9:3',     'test_pipeop_scale.R:8:3', 'test_pipeop_scale.R:18:3',     'test_pipeop_scalemaxabs.R:7:3', 'test_pipeop_select.R:9:3',     'test_pipeop_scalerange.R:8:3', 'test_pipeop_smote.R:9:3',     'test_pipeop_subsample.R:10:3', 'test_pipeop_targetinvert.R:4:3',     'test_pipeop_targetmutate.R:4:3', 'test_pipeop_targettrafo.R:4:3',     'test_pipeop_targettrafoscalerange.R:4:3', 'test_pipeop_task_preproc.R:4:3',     'test_pipeop_task_preproc.R:14:3', 'test_pipeop_spatialsign.R:7:3',     'test_pipeop_textvectorizer.R:38:3', 'test_pipeop_textvectorizer.R:189:3',     'test_pipeop_unbranch.R:10:3', 'test_pipeop_updatetarget.R:88:3',     'test_pipeop_yeojohnson.R:7:3', 'test_pipeop_vtreat.R:9:3',     'test_typecheck.R:186:3'   • empty test (2): 'test_pipeop_missind.R:101:1', 'test_pipeop_learnercv.R:52:1'      ══ Failed tests ════════════════════════════════════════════════════════════════   ── Error ('test_pipeop_targetmutate.R:59:2'): PipeOpTargetMutate - log base 2 trafo ──   Error in `log(dat$medv, base = 2)`: non-numeric argument to mathematical function   ── Failure ('test_pipeop_targettrafoscalerange.R:84:3'): PipeOpTargetTrafoScaleRange - row use subsets ──   (predict_out1$truth - a)/b not equivalent to predict_out2[[1L]]$truth.   506/506 mismatches (average diff: NaN)   [1] NA - 24.0 == NA   [2] NA - 21.6 == NA   [3] NA - 34.7 == NA   [4] NA - 33.4 == NA   [5] NA - 36.2 == NA   [6] NA - 28.7 == NA   [7] NA - 22.9 == NA   [8] NA - 22.1 == NA   [9] NA - 16.5 == NA   ...   Backtrace:       ▆    1. └─mlr3pipelines:::expect_equivalent(...) at test_pipeop_targettrafoscalerange.R:84:3    2. ├─base::suppressWarnings(testthat::expect_equivalent(...)) at tests/testthat/helper_compat.R:10:21    3. │ └─base::withCallingHandlers(...)    4. └─testthat::expect_equivalent(...)   ── Failure ('test_pipeop_targettrafoscalerange.R:85:3'): PipeOpTargetTrafoScaleRange - row use subsets ──   (predict_out1$response - a)/b not equivalent to predict_out2[[1L]]$response.   506/506 mismatches (average diff: NaN)   [1] NaN - 30.5 == NaN   [2] NaN - 21.0 == NaN   [3] NaN - 30.5 == NaN   [4] NaN - 30.5 == NaN   [5] NaN - 30.5 == NaN   [6] NaN - 30.5 == NaN   [7] NaN - 21.0 == NaN   [8] NaN - 17.4 == NaN   [9] NaN - 17.4 == NaN   ...   Backtrace:       ▆    1. └─mlr3pipelines:::expect_equivalent(...) at test_pipeop_targettrafoscalerange.R:85:3    2. ├─base::suppressWarnings(testthat::expect_equivalent(...)) at tests/testthat/helper_compat.R:10:21    3. │ └─base::withCallingHandlers(...)    4. └─testthat::expect_equivalent(...)      [ FAIL 3 | WARN 9 | SKIP 79 | PASS 12916 ]   Error: Test failures   Execution halted
• checking for unstated dependencies in vignettes ... OK
• checking package vignettes in ‘inst/doc’ ... OK
• checking re-building of vignette outputs ... [17s/21s] OK
• checking PDF version of manual ... [34s/48s] OK
• checking HTML version of manual ... [22s/32s] OK
• checking for non-standard things in the check directory ... OK
• checking for detritus in the temp directory ... OK
• DONE

Status: 2 ERRORs