- using R Under development (unstable) (2025-12-18 r89199)
- using platform: x86_64-pc-linux-gnu
- R was compiled by
gcc (GCC) 15.1.1 20250521 (Red Hat 15.1.1-2)
GNU Fortran (GCC) 15.1.1 20250521 (Red Hat 15.1.1-2)
- running under: Fedora Linux 42 (Workstation Edition)
- using session charset: UTF-8
- using option ‘--no-stop-on-test-error’
- checking for file ‘mlr3db/DESCRIPTION’ ... OK
- this is package ‘mlr3db’ version ‘0.7.0’
- package encoding: UTF-8
- checking package namespace information ... OK
- checking package dependencies ... INFO
Package suggested but not available for checking: ‘polars’
- checking if this is a source package ... OK
- checking if there is a namespace ... OK
- checking for executable files ... OK
- checking for hidden files and directories ... OK
- checking for portable file names ... OK
- checking for sufficient/correct file permissions ... OK
- checking whether package ‘mlr3db’ can be installed ... [9s/10s] OK
See the install log for details.
- checking package directory ... OK
- checking DESCRIPTION meta-information ... OK
- checking top-level files ... OK
- checking for left-over files ... OK
- checking index information ... OK
- checking package subdirectories ... OK
- checking code files for non-ASCII characters ... OK
- checking R files for syntax errors ... OK
- checking whether the package can be loaded ... OK
- checking whether the package can be loaded with stated dependencies ... OK
- checking whether the package can be unloaded cleanly ... OK
- checking whether the namespace can be loaded with stated dependencies ... OK
- checking whether the namespace can be unloaded cleanly ... OK
- checking loading without being on the library search path ... OK
- checking whether startup messages can be suppressed ... OK
- checking use of S3 registration ... OK
- checking dependencies in R code ... OK
- checking S3 generic/method consistency ... OK
- checking replacement functions ... OK
- checking foreign function calls ... OK
- checking R code for possible problems ... [10s/14s] OK
- checking Rd files ... OK
- checking Rd metadata ... OK
- checking Rd line widths ... OK
- checking Rd cross-references ... INFO
Package unavailable to check Rd xrefs: ‘polars’
- checking for missing documentation entries ... OK
- checking for code/documentation mismatches ... OK
- checking Rd \usage sections ... OK
- checking Rd contents ... OK
- checking for unstated dependencies in examples ... OK
- checking examples ... [7s/10s] OK
- checking for unstated dependencies in ‘tests’ ... OK
- checking tests ... [113s/159s] ERROR
Running ‘testthat.R’ [113s/158s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> if (requireNamespace("testthat", quietly = TRUE)) {
+ library("testthat")
+ library("mlr3db")
+ test_check("mlr3db")
+ }
Loading required package: mlr3
Loading required namespace: RSQLite
Loading required namespace: RSQLite
Saving _problems/test_train_predict_dplyr-20.R
Saving _problems/test_train_predict_duckdb-18.R
[ FAIL 2 | WARN 1 | SKIP 3 | PASS 998 ]
══ Skipped tests (3) ═══════════════════════════════════════════════════════════
• {polars} is not installed (3): 'test_as_polars_backend.R:1:1',
'test_polars.R:1:1', 'test_train_predict_polars.R:1:1'
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test_train_predict_dplyr.R:20:5'): resample works ───────────────────
Error in ``[.data.table`(data, , `:=`("task_hash", task[[1L]]$hash), by = "uhash")`: attempt access index 9/9 in VECTOR_ELT
Backtrace:
▆
1. ├─global with_future(...) at test_train_predict_dplyr.R:19:3
2. │ └─base::force(expr)
3. └─mlr3::resample(task, learner, mlr3::rsmp("cv", folds = 3)) at test_train_predict_dplyr.R:20:5
4. └─ResultData$new(data, data_extra, store_backends = store_backends)
5. └─mlr3 (local) initialize(...)
6. └─mlr3:::.__ResultData__initialize(...)
7. ├─data[, `:=`("task_hash", task[[1L]]$hash), by = "uhash"]
8. └─data.table:::`[.data.table`(...)
── Error ('test_train_predict_duckdb.R:18:5'): resample works ──────────────────
Error in ``[.data.table`(data, , `:=`("task_hash", task[[1L]]$hash), by = "uhash")`: attempt access index 9/9 in VECTOR_ELT
Backtrace:
▆
1. ├─global with_future(...) at test_train_predict_duckdb.R:17:3
2. │ └─base::force(expr)
3. └─mlr3::resample(task, learner, mlr3::rsmp("cv", folds = 3)) at test_train_predict_duckdb.R:18:5
4. └─ResultData$new(data, data_extra, store_backends = store_backends)
5. └─mlr3 (local) initialize(...)
6. └─mlr3:::.__ResultData__initialize(...)
7. ├─data[, `:=`("task_hash", task[[1L]]$hash), by = "uhash"]
8. └─data.table:::`[.data.table`(...)
[ FAIL 2 | WARN 1 | SKIP 3 | PASS 998 ]
Error:
! Test failures.
Warning message:
call dbDisconnect() when finished working with a connection
Execution halted
- checking PDF version of manual ... [8s/12s] OK
- checking HTML version of manual ... OK
- checking for non-standard things in the check directory ... OK
- checking for detritus in the temp directory ... OK
- DONE
Status: 1 ERROR