* installing *source* package ‘mDAG’ ...
** this is package ‘mDAG’ version ‘1.2.2’
** package ‘mDAG’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C++ compiler: ‘g++ (GCC) 15.1.1 20250521 (Red Hat 15.1.1-2)’
using C++11
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/mDAG/src'
g++ -std=gnu++11 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/RcppArmadillo/include' -I/usr/local/include   -fopenmp -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection   -c Greedy_Search.cpp -o Greedy_Search.o
Greedy_Search.cpp: In function ‘Rcpp::NumericVector InitScore(std::vector<std::__cxx11::basic_string<char> >, std::vector<int, std::allocator<int> >, arma::mat, std::vector<double>)’:
Greedy_Search.cpp:131:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const unsigned int’} [-Wsign-compare]
  131 |   for (int v=0;v<data.n_cols;v++){
      |                ~^~~~~~~~~~~~
Greedy_Search.cpp: In function ‘Rcpp::NumericVector ScoreGraph(std::vector<std::__cxx11::basic_string<char> >, std::vector<int, std::allocator<int> >, arma::mat, std::vector<double>, Rcpp::IntegerMatrix)’:
Greedy_Search.cpp:167:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const unsigned int’} [-Wsign-compare]
  167 |   for (int v=0;v<data.n_cols;v++){
      |                ~^~~~~~~~~~~~
Greedy_Search.cpp: In function ‘Rcpp::List SettingEdges(Rcpp::NumericVector, arma::mat, Rcpp::List, std::vector<std::__cxx11::basic_string<char> >, std::vector<int, std::allocator<int> >, std::vector<int, std::allocator<int> >, std::vector<double>)’:
Greedy_Search.cpp:206:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const unsigned int’} [-Wsign-compare]
  206 |   for (int i=0;i<data.n_cols;i++){
      |                ~^~~~~~~~~~~~
Greedy_Search.cpp: In function ‘void AddReverseDelete(Rcpp::IntegerMatrix, Rcpp::NumericVector, arma::mat, Rcpp::List, std::vector<std::__cxx11::basic_string<char> >, std::vector<int, std::allocator<int> >, std::vector<int, std::allocator<int> >, std::vector<double>)’:
Greedy_Search.cpp:234:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const unsigned int’} [-Wsign-compare]
  234 |   for (int i=0;i<data.n_cols;i++){
      |                ~^~~~~~~~~~~~
g++ -std=gnu++11 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/RcppArmadillo/include' -I/usr/local/include   -fopenmp -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection   -c RcppExports.cpp -o RcppExports.o
g++ -std=gnu++11 -shared -L/usr/local/lib64 -o mDAG.so Greedy_Search.o RcppExports.o -fopenmp -llapack -L/data/gannet/ripley/R/R-devel/lib -lRblas -lgfortran -lm -lquadmath
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/mDAG/src'
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/mDAG/src'
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/mDAG/src'
installing to /data/gannet/ripley/R/packages/tests-devel/mDAG.Rcheck/00LOCK-mDAG/00new/mDAG/libs
** R
** data
*** moving datasets to lazyload DB
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (mDAG)