* installing *source* package ‘lsbclust’ ... ** package ‘lsbclust’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘g++-13 (GCC) 13.2.0’ make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/lsbclust/src' g++-13 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c ClustMeans.cpp -o ClustMeans.o g++-13 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c KMeansW.cpp -o KMeansW.o g++-13 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c LossMat.cpp -o LossMat.o g++-13 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c RcppExports.cpp -o RcppExports.o KMeansW.cpp: In function 'Rcpp::List AssignCluster(Rcpp::NumericMatrix, Rcpp::NumericVector, Rcpp::NumericMatrix, int)': KMeansW.cpp:115:26: warning: 'minLossInd' may be used uninitialized [-Wmaybe-uninitialized] 115 | cm[i] = minLossInd + 1; // the + 1 is needed for use in R (as c++ indexes arrays from 0) | ~~~~~~~~~~~^~~ KMeansW.cpp:80:10: note: 'minLossInd' was declared here 80 | int minLossInd; | ^~~~~~~~~~ In file included from /data/gannet/ripley/R/test-dev/Rcpp/include/Rcpp/Vector.h:54, from /data/gannet/ripley/R/test-dev/Rcpp/include/Rcpp.h:40, from KMeansW.cpp:1: In member function 'Rcpp::traits::r_vector_cache<RTYPE, StoragePolicy>::proxy Rcpp::traits::r_vector_cache<RTYPE, StoragePolicy>::ref(R_xlen_t) [with int RTYPE = 14; StoragePolicy = Rcpp::PreserveStorage]', inlined from 'Rcpp::Vector<RTYPE, StoragePolicy>::Proxy Rcpp::Vector<RTYPE, StoragePolicy>::operator[](R_xlen_t) [with int RTYPE = 14; StoragePolicy = Rcpp::PreserveStorage]' at /data/gannet/ripley/R/test-dev/Rcpp/include/Rcpp/vector/Vector.h:340:60, inlined from 'Rcpp::List AssignCluster(Rcpp::NumericMatrix, Rcpp::NumericVector, Rcpp::NumericMatrix, int)' at KMeansW.cpp:132:45: /data/gannet/ripley/R/test-dev/Rcpp/include/Rcpp/vector/traits.h:46:61: warning: 'maxLossInd' may be used uninitialized [-Wmaybe-uninitialized] 46 | inline proxy ref(R_xlen_t i) { return start[i] ; } | ^ KMeansW.cpp: In function 'Rcpp::List AssignCluster(Rcpp::NumericMatrix, Rcpp::NumericVector, Rcpp::NumericMatrix, int)': KMeansW.cpp:82:10: note: 'maxLossInd' was declared here 82 | int maxLossInd; | ^~~~~~~~~~ g++-13 -std=gnu++17 -shared -L/usr/local/gcc13/lib64 -L/usr/local/lib64 -L/usr/local/clang18/lib/x86_64-unknown-linux-gnu -o lsbclust.so ClustMeans.o KMeansW.o LossMat.o RcppExports.o make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/lsbclust/src' make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/lsbclust/src' make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/lsbclust/src' installing to /data/gannet/ripley/R/packages/tests-devel/lsbclust.Rcheck/00LOCK-lsbclust/00new/lsbclust/libs ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (lsbclust)