* installing *source* package ‘lpSolve’ ...
** this is package ‘lpSolve’ version ‘5.6.23’
** package ‘lpSolve’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C compiler: ‘gcc (GCC) 15.1.1 20250521 (Red Hat 15.1.1-2)’
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/lpSolve/src'
gcc -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I . -DINTEGERTIME -DPARSER_LP -DBUILDING_FOR_R -DYY_NEVER_INTERACTIVE -DUSRDLL -DCLOCKTIME -DRoleIsExternalInvEngine -DINVERSE_ACTIVE=INVERSE_LUSOL -DINLINE=static -DParanoia -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c colamd.c -o colamd.o
gcc -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I . -DINTEGERTIME -DPARSER_LP -DBUILDING_FOR_R -DYY_NEVER_INTERACTIVE -DUSRDLL -DCLOCKTIME -DRoleIsExternalInvEngine -DINVERSE_ACTIVE=INVERSE_LUSOL -DINLINE=static -DParanoia -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c commonlib.c -o commonlib.o
gcc -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I . -DINTEGERTIME -DPARSER_LP -DBUILDING_FOR_R -DYY_NEVER_INTERACTIVE -DUSRDLL -DCLOCKTIME -DRoleIsExternalInvEngine -DINVERSE_ACTIVE=INVERSE_LUSOL -DINLINE=static -DParanoia -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c hbio.c -o hbio.o
In file included from /usr/include/stdio.h:970,
from hbio.h:4,
from hbio.c:215:
In function ‘fprintf’,
inlined from ‘writeHB_mat_double’ at hbio.c:832:5:
/usr/include/bits/stdio2.h:111:10: warning: ‘out_file’ may be used uninitialized [-Wmaybe-uninitialized]
111 | return __fprintf_chk (__stream, __USE_FORTIFY_LEVEL - 1, __fmt,
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
112 | __va_arg_pack ());
| ~~~~~~~~~~~~~~~~~
hbio.c: In function ‘writeHB_mat_double’:
hbio.c:762:11: note: ‘out_file’ was declared here
762 | FILE *out_file;
| ^~~~~~~~
In function ‘fprintf’,
inlined from ‘writeHB_mat_char’ at hbio.c:1422:5:
/usr/include/bits/stdio2.h:111:10: warning: ‘out_file’ may be used uninitialized [-Wmaybe-uninitialized]
111 | return __fprintf_chk (__stream, __USE_FORTIFY_LEVEL - 1, __fmt,
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
112 | __va_arg_pack ());
| ~~~~~~~~~~~~~~~~~
hbio.c: In function ‘writeHB_mat_char’:
hbio.c:1357:11: note: ‘out_file’ was declared here
1357 | FILE *out_file;
| ^~~~~~~~
gcc -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I . -DINTEGERTIME -DPARSER_LP -DBUILDING_FOR_R -DYY_NEVER_INTERACTIVE -DUSRDLL -DCLOCKTIME -DRoleIsExternalInvEngine -DINVERSE_ACTIVE=INVERSE_LUSOL -DINLINE=static -DParanoia -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c ini.c -o ini.o
gcc -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I . -DINTEGERTIME -DPARSER_LP -DBUILDING_FOR_R -DYY_NEVER_INTERACTIVE -DUSRDLL -DCLOCKTIME -DRoleIsExternalInvEngine -DINVERSE_ACTIVE=INVERSE_LUSOL -DINLINE=static -DParanoia -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c init.c -o init.o
gcc -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I . -DINTEGERTIME -DPARSER_LP -DBUILDING_FOR_R -DYY_NEVER_INTERACTIVE -DUSRDLL -DCLOCKTIME -DRoleIsExternalInvEngine -DINVERSE_ACTIVE=INVERSE_LUSOL -DINLINE=static -DParanoia -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c isfixedvar.c -o isfixedvar.o
gcc -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I . -DINTEGERTIME -DPARSER_LP -DBUILDING_FOR_R -DYY_NEVER_INTERACTIVE -DUSRDLL -DCLOCKTIME -DRoleIsExternalInvEngine -DINVERSE_ACTIVE=INVERSE_LUSOL -DINLINE=static -DParanoia -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c lp_Hash.c -o lp_Hash.o
gcc -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I . -DINTEGERTIME -DPARSER_LP -DBUILDING_FOR_R -DYY_NEVER_INTERACTIVE -DUSRDLL -DCLOCKTIME -DRoleIsExternalInvEngine -DINVERSE_ACTIVE=INVERSE_LUSOL -DINLINE=static -DParanoia -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c lp_LUSOL.c -o lp_LUSOL.o
gcc -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I . -DINTEGERTIME -DPARSER_LP -DBUILDING_FOR_R -DYY_NEVER_INTERACTIVE -DUSRDLL -DCLOCKTIME -DRoleIsExternalInvEngine -DINVERSE_ACTIVE=INVERSE_LUSOL -DINLINE=static -DParanoia -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c lp_MDO.c -o lp_MDO.o
gcc -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I . -DINTEGERTIME -DPARSER_LP -DBUILDING_FOR_R -DYY_NEVER_INTERACTIVE -DUSRDLL -DCLOCKTIME -DRoleIsExternalInvEngine -DINVERSE_ACTIVE=INVERSE_LUSOL -DINLINE=static -DParanoia -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c lp_MPS.c -o lp_MPS.o
lp_MPS.c: In function ‘MPS_getnameidx.constprop’:
lp_MPS.c:1532:9: warning: ‘in’ may be used uninitialized [-Wmaybe-uninitialized]
1532 | return( in );
| ^
lp_MPS.c:1502:7: note: ‘in’ declared here
1502 | int in;
| ^~
In file included from /usr/include/stdio.h:970,
from commonlib.h:5,
from lp_MPS.c:5:
In function ‘fprintf’,
inlined from ‘MPS_writeBAS’ at lp_MPS.c:1687:3:
/usr/include/bits/stdio2.h:111:10: warning: ‘output’ may be used uninitialized [-Wmaybe-uninitialized]
111 | return __fprintf_chk (__stream, __USE_FORTIFY_LEVEL - 1, __fmt,
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
112 | __va_arg_pack ());
| ~~~~~~~~~~~~~~~~~
lp_MPS.c: In function ‘MPS_writeBAS’:
lp_MPS.c:1664:11: note: ‘output’ was declared here
1664 | FILE *output; /* = stdout; */
| ^~~~~~
gcc -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I . -DINTEGERTIME -DPARSER_LP -DBUILDING_FOR_R -DYY_NEVER_INTERACTIVE -DUSRDLL -DCLOCKTIME -DRoleIsExternalInvEngine -DINVERSE_ACTIVE=INVERSE_LUSOL -DINLINE=static -DParanoia -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c lp_SOS.c -o lp_SOS.o
gcc -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I . -DINTEGERTIME -DPARSER_LP -DBUILDING_FOR_R -DYY_NEVER_INTERACTIVE -DUSRDLL -DCLOCKTIME -DRoleIsExternalInvEngine -DINVERSE_ACTIVE=INVERSE_LUSOL -DINLINE=static -DParanoia -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c lp_crash.c -o lp_crash.o
gcc -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I . -DINTEGERTIME -DPARSER_LP -DBUILDING_FOR_R -DYY_NEVER_INTERACTIVE -DUSRDLL -DCLOCKTIME -DRoleIsExternalInvEngine -DINVERSE_ACTIVE=INVERSE_LUSOL -DINLINE=static -DParanoia -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c lp_lib.c -o lp_lib.o
gcc -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I . -DINTEGERTIME -DPARSER_LP -DBUILDING_FOR_R -DYY_NEVER_INTERACTIVE -DUSRDLL -DCLOCKTIME -DRoleIsExternalInvEngine -DINVERSE_ACTIVE=INVERSE_LUSOL -DINLINE=static -DParanoia -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c lp_matrix.c -o lp_matrix.o
lp_lib.c: In function ‘set_BFP’:
lp_lib.c:5185:38: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic]
5185 | lp->bfp_compatible = (BFPbool_lpintintint *)
| ^
lp_lib.c:5191:38: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic]
5191 | lp->bfp_name = (BFPchar *)
| ^
lp_lib.c:5193:38: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic]
5193 | lp->bfp_free = (BFP_lp *)
| ^
lp_lib.c:5195:38: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic]
5195 | lp->bfp_resize = (BFPbool_lpint *)
| ^
lp_lib.c:5197:38: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic]
5197 | lp->bfp_nonzeros = (BFPint_lpbool *)
| ^
lp_lib.c:5199:38: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic]
5199 | lp->bfp_memallocated = (BFPint_lp *)
| ^
lp_lib.c:5201:38: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic]
5201 | lp->bfp_restart = (BFPbool_lp *)
| ^
lp_lib.c:5203:38: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic]
5203 | lp->bfp_mustrefactorize = (BFPbool_lp *)
| ^
lp_lib.c:5205:38: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic]
5205 | lp->bfp_preparefactorization = (BFPint_lp *)
| ^
lp_lib.c:5207:38: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic]
5207 | lp->bfp_factorize = (BFPint_lpintintboolbool *)
| ^
lp_lib.c:5209:38: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic]
5209 | lp->bfp_finishupdate = (BFPbool_lpbool *)
| ^
lp_lib.c:5211:38: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic]
5211 | lp->bfp_ftran_normal = (BFP_lprealint *)
| ^
lp_lib.c:5213:38: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic]
5213 | lp->bfp_ftran_prepare = (BFP_lprealint *)
| ^
lp_lib.c:5215:38: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic]
5215 | lp->bfp_btran_normal = (BFP_lprealint *)
| ^
lp_lib.c:5217:38: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic]
5217 | lp->bfp_status = (BFPint_lp *)
| ^
lp_lib.c:5219:38: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic]
5219 | lp->bfp_implicitslack = (BFPbool_lp *)
| ^
lp_lib.c:5221:38: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic]
5221 | lp->bfp_indexbase = (BFPint_lp *)
| ^
lp_lib.c:5223:38: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic]
5223 | lp->bfp_rowoffset = (BFPint_lp *)
| ^
lp_lib.c:5225:38: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic]
5225 | lp->bfp_pivotmax = (BFPint_lp *)
| ^
lp_lib.c:5227:38: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic]
5227 | lp->bfp_init = (BFPbool_lpintintchar *)
| ^
lp_lib.c:5229:38: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic]
5229 | lp->bfp_pivotalloc = (BFPbool_lpint *)
| ^
lp_lib.c:5231:38: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic]
5231 | lp->bfp_colcount = (BFPint_lp *)
| ^
lp_lib.c:5233:38: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic]
5233 | lp->bfp_canresetbasis = (BFPbool_lp *)
| ^
lp_lib.c:5235:38: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic]
5235 | lp->bfp_finishfactorization = (BFP_lp *)
| ^
lp_lib.c:5237:38: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic]
5237 | lp->bfp_updaterefactstats = (BFP_lp *)
| ^
lp_lib.c:5239:38: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic]
5239 | lp->bfp_prepareupdate = (BFPlreal_lpintintreal *)
| ^
lp_lib.c:5241:38: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic]
5241 | lp->bfp_pivotRHS = (BFPreal_lplrealreal *)
| ^
lp_lib.c:5243:38: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic]
5243 | lp->bfp_btran_double = (BFP_lprealintrealint *)
| ^
lp_lib.c:5245:38: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic]
5245 | lp->bfp_efficiency = (BFPreal_lp *)
| ^
lp_lib.c:5247:38: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic]
5247 | lp->bfp_pivotvector = (BFPrealp_lp *)
| ^
lp_lib.c:5249:38: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic]
5249 | lp->bfp_pivotcount = (BFPint_lp *)
| ^
lp_lib.c:5251:38: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic]
5251 | lp->bfp_refactcount = (BFPint_lpint *)
| ^
lp_lib.c:5253:38: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic]
5253 | lp->bfp_isSetI = (BFPbool_lp *)
| ^
lp_lib.c:5255:38: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic]
5255 | lp->bfp_findredundant = (BFPint_lpintrealcbintint *)
| ^
lp_lib.c: In function ‘set_XLI’:
lp_lib.c:5447:38: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic]
5447 | lp->xli_compatible = (XLIbool_lpintintint *)
| ^
lp_lib.c:5453:40: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic]
5453 | lp->xli_name = (XLIchar *)
| ^
lp_lib.c:5455:40: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic]
5455 | lp->xli_readmodel = (XLIbool_lpcharcharcharint *)
| ^
lp_lib.c:5457:40: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic]
5457 | lp->xli_writemodel = (XLIbool_lpcharcharbool *)
| ^
gcc -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I . -DINTEGERTIME -DPARSER_LP -DBUILDING_FOR_R -DYY_NEVER_INTERACTIVE -DUSRDLL -DCLOCKTIME -DRoleIsExternalInvEngine -DINVERSE_ACTIVE=INVERSE_LUSOL -DINLINE=static -DParanoia -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c lp_mipbb.c -o lp_mipbb.o
lp_lib.c: In function ‘set_outputfile’:
lp_lib.c:201:5: warning: ‘output’ may be used uninitialized [-Wmaybe-uninitialized]
201 | set_outputstream(lp, output);
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
lp_lib.c:197:11: note: ‘output’ was declared here
197 | FILE *output; /* = stdout; */
| ^~~~~~
gcc -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I . -DINTEGERTIME -DPARSER_LP -DBUILDING_FOR_R -DYY_NEVER_INTERACTIVE -DUSRDLL -DCLOCKTIME -DRoleIsExternalInvEngine -DINVERSE_ACTIVE=INVERSE_LUSOL -DINLINE=static -DParanoia -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c lp_params.c -o lp_params.o
lp_params.c:266:1: warning: missing braces around initializer [-Wmissing-braces]
266 | {
| ^
lp_params.c:266:1: warning: missing braces around initializer [-Wmissing-braces]
lp_params.c:266:1: warning: missing braces around initializer [-Wmissing-braces]
lp_params.c:266:1: warning: missing braces around initializer [-Wmissing-braces]
lp_params.c:266:1: warning: missing braces around initializer [-Wmissing-braces]
lp_params.c:266:1: warning: missing braces around initializer [-Wmissing-braces]
lp_params.c:266:1: warning: missing braces around initializer [-Wmissing-braces]
lp_params.c:266:1: warning: missing braces around initializer [-Wmissing-braces]
lp_params.c:266:1: warning: missing braces around initializer [-Wmissing-braces]
lp_params.c:266:1: warning: missing braces around initializer [-Wmissing-braces]
lp_params.c:266:1: warning: missing braces around initializer [-Wmissing-braces]
lp_params.c:266:1: warning: missing braces around initializer [-Wmissing-braces]
lp_params.c:266:1: warning: missing braces around initializer [-Wmissing-braces]
lp_params.c:266:1: warning: missing braces around initializer [-Wmissing-braces]
lp_params.c:266:1: warning: missing braces around initializer [-Wmissing-braces]
lp_params.c:266:1: warning: missing braces around initializer [-Wmissing-braces]
lp_params.c:266:1: warning: missing braces around initializer [-Wmissing-braces]
lp_params.c:266:1: warning: missing braces around initializer [-Wmissing-braces]
lp_params.c:266:1: warning: missing braces around initializer [-Wmissing-braces]
lp_params.c:266:1: warning: missing braces around initializer [-Wmissing-braces]
lp_params.c:266:1: warning: missing braces around initializer [-Wmissing-braces]
lp_params.c:266:1: warning: missing braces around initializer [-Wmissing-braces]
lp_params.c:266:1: warning: missing braces around initializer [-Wmissing-braces]
lp_params.c:266:1: warning: missing braces around initializer [-Wmissing-braces]
lp_params.c:266:1: warning: missing braces around initializer [-Wmissing-braces]
lp_params.c:266:1: warning: missing braces around initializer [-Wmissing-braces]
lp_params.c:266:1: warning: missing braces around initializer [-Wmissing-braces]
lp_params.c:266:1: warning: missing braces around initializer [-Wmissing-braces]
lp_params.c:266:1: warning: missing braces around initializer [-Wmissing-braces]
lp_params.c:266:1: warning: missing braces around initializer [-Wmissing-braces]
lp_params.c:266:1: warning: missing braces around initializer [-Wmissing-braces]
lp_params.c:266:1: warning: missing braces around initializer [-Wmissing-braces]
lp_params.c:266:1: warning: missing braces around initializer [-Wmissing-braces]
gcc -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I . -DINTEGERTIME -DPARSER_LP -DBUILDING_FOR_R -DYY_NEVER_INTERACTIVE -DUSRDLL -DCLOCKTIME -DRoleIsExternalInvEngine -DINVERSE_ACTIVE=INVERSE_LUSOL -DINLINE=static -DParanoia -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c lp_presolve.c -o lp_presolve.o
lp_presolve.c: In function ‘presolve_debugmap’:
lp_presolve.c:486:51: warning: variable ‘n’ set but not used [-Wunused-but-set-variable]
486 | int colnr, ix, ie, nx, jx, je, *cols, *rows, n;
| ^
lp_presolve.c: In function ‘presolve_colfixdual’:
lp_presolve.c:2016:18: warning: variable ‘isMI’ set but not used [-Wunused-but-set-variable]
2016 | MYBOOL hasOF, isMI, isDualFREE = TRUE;
| ^~~~
lp_presolve.c: In function ‘presolve_coldominance01’:
lp_presolve.c:3849:34: warning: variable ‘je’ set but not used [-Wunused-but-set-variable]
3849 | int i, ii, ib, ie, n, jb, je, jx, jj, item, item2,
| ^~
lp_presolve.c: In function ‘presolve_columns’:
lp_presolve.c:4622:46: warning: variable ‘item’ set but not used [-Wunused-but-set-variable]
4622 | status = RUNNING, ix, j, countNZ, item;
| ^~~~
lp_presolve.c:4615:31: warning: variable ‘unbounded’ set but not used [-Wunused-but-set-variable]
4615 | MYBOOL candelete, isOFNZ, unbounded,
| ^~~~~~~~~
lp_presolve.c: In function ‘presolve_rows’:
lp_presolve.c:5060:13: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation]
5060 | if(!presolve_fixSOS1(psdata, j, Value1, &iConRemove, &iVarFixed))
| ^~
lp_presolve.c:5062:15: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’
5062 | psdata->forceupdate = TRUE;
| ^~~~~~
In file included from /usr/include/stdio.h:970,
from commonlib.h:5,
from lp_presolve.c:36:
In function ‘fprintf’,
inlined from ‘presolve_debugdump’ at lp_presolve.c:3585:3:
/usr/include/bits/stdio2.h:111:10: warning: ‘output’ may be used uninitialized [-Wmaybe-uninitialized]
111 | return __fprintf_chk (__stream, __USE_FORTIFY_LEVEL - 1, __fmt,
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
112 | __va_arg_pack ());
| ~~~~~~~~~~~~~~~~~
lp_presolve.c: In function ‘presolve_debugdump’:
lp_presolve.c:3558:11: note: ‘output’ was declared here
3558 | FILE *output; /* = stdout; */
| ^~~~~~
gcc -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I . -DINTEGERTIME -DPARSER_LP -DBUILDING_FOR_R -DYY_NEVER_INTERACTIVE -DUSRDLL -DCLOCKTIME -DRoleIsExternalInvEngine -DINVERSE_ACTIVE=INVERSE_LUSOL -DINLINE=static -DParanoia -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c lp_price.c -o lp_price.o
lp_price.c: In function ‘compareImprovementVar’:
lp_price.c:49:7: warning: variable ‘candidatecolno’ set but not used [-Wunused-but-set-variable]
49 | candidatecolno, candidatevarno = candidate->varno;
| ^~~~~~~~~~~~~~
lp_price.c:48:7: warning: variable ‘currentcolno’ set but not used [-Wunused-but-set-variable]
48 | int currentcolno, currentvarno = current->varno,
| ^~~~~~~~~~~~
lp_price.c: In function ‘compareSubstitutionVar’:
lp_price.c:162:10: warning: variable ‘candidatecolno’ set but not used [-Wunused-but-set-variable]
162 | candidatecolno, candidatevarno = candidate->varno;
| ^~~~~~~~~~~~~~
lp_price.c:161:10: warning: variable ‘currentcolno’ set but not used [-Wunused-but-set-variable]
161 | int currentcolno, currentvarno = current->varno,
| ^~~~~~~~~~~~
lp_price.c: In function ‘partial_findBlocks’:
lp_price.c:1560:15: warning: variable ‘blockdata’ set but not used [-Wunused-but-set-variable]
1560 | partialrec *blockdata;
| ^~~~~~~~~
gcc -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I . -DINTEGERTIME -DPARSER_LP -DBUILDING_FOR_R -DYY_NEVER_INTERACTIVE -DUSRDLL -DCLOCKTIME -DRoleIsExternalInvEngine -DINVERSE_ACTIVE=INVERSE_LUSOL -DINLINE=static -DParanoia -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c lp_pricePSE.c -o lp_pricePSE.o
gcc -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I . -DINTEGERTIME -DPARSER_LP -DBUILDING_FOR_R -DYY_NEVER_INTERACTIVE -DUSRDLL -DCLOCKTIME -DRoleIsExternalInvEngine -DINVERSE_ACTIVE=INVERSE_LUSOL -DINLINE=static -DParanoia -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c lp_report.c -o lp_report.o
In file included from /usr/include/stdio.h:970,
from lp_report.c:19:
In function ‘fprintf’,
inlined from ‘REPORT_debugdump’ at lp_report.c:308:3:
/usr/include/bits/stdio2.h:111:10: warning: ‘output’ may be used uninitialized [-Wmaybe-uninitialized]
111 | return __fprintf_chk (__stream, __USE_FORTIFY_LEVEL - 1, __fmt,
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
112 | __va_arg_pack ());
| ~~~~~~~~~~~~~~~~~
lp_report.c: In function ‘REPORT_debugdump’:
lp_report.c:299:11: note: ‘output’ was declared here
299 | FILE *output;
| ^~~~~~
lp_report.c: In function ‘REPORT_mat_mmsave’:
lp_report.c:758:3: warning: ‘output’ may be used uninitialized [-Wmaybe-uninitialized]
758 | mm_write_mtx_crd_size(output, n+kk, m, nz+(colndx == lp->var_basic ? 1 : 0));
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
lp_report.c:709:16: note: ‘output’ was declared here
709 | FILE *output; /* = stdout; */
| ^~~~~~
gcc -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I . -DINTEGERTIME -DPARSER_LP -DBUILDING_FOR_R -DYY_NEVER_INTERACTIVE -DUSRDLL -DCLOCKTIME -DRoleIsExternalInvEngine -DINVERSE_ACTIVE=INVERSE_LUSOL -DINLINE=static -DParanoia -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c lp_rlp.c -o lp_rlp.o
In file included from lp_rlp.c:97:
lp_rlp.h:1871:14: warning: ‘lp_yy_flex_realloc’ defined but not used [-Wunused-function]
1871 | static void *lp_yy_flex_realloc( void *ptr, lp_yy_size_t size )
| ^~~~~~~~~~~~~~~~~~
lp_rlp.h:1845:12: warning: ‘lp_yy_flex_strlen’ defined but not used [-Wunused-function]
1845 | static int lp_yy_flex_strlen( lp_yyconst char *s )
| ^~~~~~~~~~~~~~~~~
lp_rlp.h:1797:13: warning: ‘lp_yy_fatal_error’ defined but not used [-Wunused-function]
1797 | static void lp_yy_fatal_error( lp_yyconst char msg[] )
| ^~~~~~~~~~~~~~~~~
lp_rlp.h:1353:13: warning: ‘lp_yyunput’ defined but not used [-Wunused-function]
1353 | static void lp_yyunput( int c, register char *lp_yy_bp )
| ^~~~~~~~~~
gcc -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I . -DINTEGERTIME -DPARSER_LP -DBUILDING_FOR_R -DYY_NEVER_INTERACTIVE -DUSRDLL -DCLOCKTIME -DRoleIsExternalInvEngine -DINVERSE_ACTIVE=INVERSE_LUSOL -DINLINE=static -DParanoia -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c lp_scale.c -o lp_scale.o
lp_scale.c: In function ‘CurtisReidScales’:
lp_scale.c:150:24: warning: variable ‘ekm2’ set but not used [-Wunused-but-set-variable]
150 | qkm2, qkqkm1, ekm2, ekekm1,
| ^~~~
lp_scale.c:150:10: warning: variable ‘qkm2’ set but not used [-Wunused-but-set-variable]
150 | qkm2, qkqkm1, ekm2, ekekm1,
| ^~~~
lp_scale.c: In function ‘scale_columns’:
lp_scale.c:632:16: warning: variable ‘colMax’ set but not used [-Wunused-but-set-variable]
632 | int i,j, colMax, nz;
| ^~~~~~
gcc -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I . -DINTEGERTIME -DPARSER_LP -DBUILDING_FOR_R -DYY_NEVER_INTERACTIVE -DUSRDLL -DCLOCKTIME -DRoleIsExternalInvEngine -DINVERSE_ACTIVE=INVERSE_LUSOL -DINLINE=static -DParanoia -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c lp_simplex.c -o lp_simplex.o
lp_simplex.c: In function ‘dualloop’:
lp_simplex.c:983:10: warning: variable ‘epsvalue’ set but not used [-Wunused-but-set-variable]
983 | REAL epsvalue, xviolated, cviolated,
| ^~~~~~~~
gcc -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I . -DINTEGERTIME -DPARSER_LP -DBUILDING_FOR_R -DYY_NEVER_INTERACTIVE -DUSRDLL -DCLOCKTIME -DRoleIsExternalInvEngine -DINVERSE_ACTIVE=INVERSE_LUSOL -DINLINE=static -DParanoia -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c lp_utils.c -o lp_utils.o
lp_utils.c: In function ‘searchFor’:
lp_utils.c:546:5: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation]
546 | if(absolute)
| ^~
lp_utils.c:548:7: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’
548 | while((beginPos < endPos) && (match != target)) {
| ^~~~~
lp_utils.c: In function ‘compareLink’:
lp_utils.c:947:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation]
947 | if(test == 0)
| ^~
lp_utils.c:949:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’
949 | if(test == 0)
| ^~
gcc -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I . -DINTEGERTIME -DPARSER_LP -DBUILDING_FOR_R -DYY_NEVER_INTERACTIVE -DUSRDLL -DCLOCKTIME -DRoleIsExternalInvEngine -DINVERSE_ACTIVE=INVERSE_LUSOL -DINLINE=static -DParanoia -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c lp_wlp.c -o lp_wlp.o
gcc -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I . -DINTEGERTIME -DPARSER_LP -DBUILDING_FOR_R -DYY_NEVER_INTERACTIVE -DUSRDLL -DCLOCKTIME -DRoleIsExternalInvEngine -DINVERSE_ACTIVE=INVERSE_LUSOL -DINLINE=static -DParanoia -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c lpslink56.c -o lpslink56.o
gcc -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I . -DINTEGERTIME -DPARSER_LP -DBUILDING_FOR_R -DYY_NEVER_INTERACTIVE -DUSRDLL -DCLOCKTIME -DRoleIsExternalInvEngine -DINVERSE_ACTIVE=INVERSE_LUSOL -DINLINE=static -DParanoia -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c lusol.c -o lusol.o
In file included from lusol.c:748:
lusol1.h: In function ‘LU1FAC’:
lusol1.h:3359:34: warning: variable ‘TSP’ set but not used [-Wunused-but-set-variable]
3359 | MYBOOL KEEPLU, TCP, TPP, TRP, TSP;
| ^~~
lusol1.h:3359:29: warning: variable ‘TRP’ set but not used [-Wunused-but-set-variable]
3359 | MYBOOL KEEPLU, TCP, TPP, TRP, TSP;
| ^~~
lusol1.h:3359:19: warning: variable ‘TCP’ set but not used [-Wunused-but-set-variable]
3359 | MYBOOL KEEPLU, TCP, TPP, TRP, TSP;
| ^~~
gcc -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I . -DINTEGERTIME -DPARSER_LP -DBUILDING_FOR_R -DYY_NEVER_INTERACTIVE -DUSRDLL -DCLOCKTIME -DRoleIsExternalInvEngine -DINVERSE_ACTIVE=INVERSE_LUSOL -DINLINE=static -DParanoia -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c lusolio.c -o lusolio.o
gcc -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I . -DINTEGERTIME -DPARSER_LP -DBUILDING_FOR_R -DYY_NEVER_INTERACTIVE -DUSRDLL -DCLOCKTIME -DRoleIsExternalInvEngine -DINVERSE_ACTIVE=INVERSE_LUSOL -DINLINE=static -DParanoia -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c mmio.c -o mmio.o
gcc -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I . -DINTEGERTIME -DPARSER_LP -DBUILDING_FOR_R -DYY_NEVER_INTERACTIVE -DUSRDLL -DCLOCKTIME -DRoleIsExternalInvEngine -DINVERSE_ACTIVE=INVERSE_LUSOL -DINLINE=static -DParanoia -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c myblas.c -o myblas.o
myblas.c: In function ‘load_BLAS’:
myblas.c:98:21: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic]
98 | BLAS_dscal = (BLAS_dscal_func *) my_GetProcAddress(hBLAS, BLAS_prec "scal");
| ^
myblas.c:99:21: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic]
99 | BLAS_dcopy = (BLAS_dcopy_func *) my_GetProcAddress(hBLAS, BLAS_prec "copy");
| ^
myblas.c:100:21: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic]
100 | BLAS_daxpy = (BLAS_daxpy_func *) my_GetProcAddress(hBLAS, BLAS_prec "axpy");
| ^
myblas.c:101:21: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic]
101 | BLAS_dswap = (BLAS_dswap_func *) my_GetProcAddress(hBLAS, BLAS_prec "swap");
| ^
myblas.c:102:21: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic]
102 | BLAS_ddot = (BLAS_ddot_func *) my_GetProcAddress(hBLAS, BLAS_prec "dot");
| ^
myblas.c:103:21: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic]
103 | BLAS_idamax = (BLAS_idamax_func *) my_GetProcAddress(hBLAS, "i" BLAS_prec "amax");
| ^
gcc -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I . -DINTEGERTIME -DPARSER_LP -DBUILDING_FOR_R -DYY_NEVER_INTERACTIVE -DUSRDLL -DCLOCKTIME -DRoleIsExternalInvEngine -DINVERSE_ACTIVE=INVERSE_LUSOL -DINLINE=static -DParanoia -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c sparselib.c -o sparselib.o
sparselib.c: In function ‘dswapVector1’:
sparselib.c:823:10: warning: variable ‘d’ set but not used [-Wunused-but-set-variable]
823 | int i, d, n;
| ^
gcc -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I . -DINTEGERTIME -DPARSER_LP -DBUILDING_FOR_R -DYY_NEVER_INTERACTIVE -DUSRDLL -DCLOCKTIME -DRoleIsExternalInvEngine -DINVERSE_ACTIVE=INVERSE_LUSOL -DINLINE=static -DParanoia -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c yacc_read.c -o yacc_read.o
In file included from /usr/include/string.h:548,
from yacc_read.c:33:
In function ‘memcpy’,
inlined from ‘yacc_read’ at yacc_read.c:1100:4:
/usr/include/bits/string_fortified.h:29:10: warning: ‘__builtin_memcpy’ specified bound between 18446744056529682440 and 18446744073709551608 exceeds maximum object size 9223372036854775807 [-Wstringop-overflow=]
29 | return __builtin___memcpy_chk (__dest, __src, __len,
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
30 | __glibc_objsize0 (__dest));
| ~~~~~~~~~~~~~~~~~~~~~~~~~~
gcc -shared -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -fpic -L/usr/local/lib64 -o lpSolve.so colamd.o commonlib.o hbio.o ini.o init.o isfixedvar.o lp_Hash.o lp_LUSOL.o lp_MDO.o lp_MPS.o lp_SOS.o lp_crash.o lp_lib.o lp_matrix.o lp_mipbb.o lp_params.o lp_presolve.o lp_price.o lp_pricePSE.o lp_report.o lp_rlp.o lp_scale.o lp_simplex.o lp_utils.o lp_wlp.o lpslink56.o lusol.o lusolio.o mmio.o myblas.o sparselib.o yacc_read.o
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/lpSolve/src'
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/lpSolve/src'
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/lpSolve/src'
installing to /data/gannet/ripley/R/packages/tests-devel/lpSolve.Rcheck/00LOCK-lpSolve/00new/lpSolve/libs
** R
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (lpSolve)