* installing *source* package ‘lassoshooting’ ... ** package ‘lassoshooting’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘gcc-13 (GCC) 13.2.0’ make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/lassoshooting/src' gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Werror=format-security -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c ccd_common.c -o ccd_common.o ccd_common.c: In function 'ccd_common': ccd_common.c:65:26: warning: argument 1 range [18446744071562067968, 18446744073709551615] exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 65 | params->w = (double*)calloc(p,sizeof(double)); | ^~~~~~~~~~~~~~~~~~~~~~~~ In file included from ccd_common.c:1: /usr/include/stdlib.h:543:14: note: in a call to allocation function 'calloc' declared here 543 | extern void *calloc (size_t __nmemb, size_t __size) | ^~~~~~ gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Werror=format-security -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c ccd_r.c -o ccd_r.o ccd_r.c: In function 'ccd': ccd_r.c:291:5: warning: 'sR' may be used uninitialized [-Wmaybe-uninitialized] 291 | SET_VECTOR_ELT(list, 4, sR); // attaching s vector to list | ^~~~~~~~~~~~~~~~~~~~~~~~~~~ ccd_r.c:260:50: note: 'sR' was declared here 260 | SEXP list_names, list, itsR, deltaR, infnormR, sR; | ^~ gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Werror=format-security -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c softthresh_r.c -o softthresh_r.o softthresh_r.c: In function 'R_softthresh': softthresh_r.c:39:11: warning: 'x' may be used uninitialized [-Wmaybe-uninitialized] 39 | *resp = softthresh(x,t); | ^~~~~~~~~~~~~~~ softthresh_r.c:20:10: note: 'x' was declared here 20 | double x,t; | ^ softthresh_r.c:39:11: warning: 't' may be used uninitialized [-Wmaybe-uninitialized] 39 | *resp = softthresh(x,t); | ^~~~~~~~~~~~~~~ softthresh_r.c:20:12: note: 't' was declared here 20 | double x,t; | ^ gcc-13 -shared -g -O2 -Wall -pedantic -mtune=native -Werror=format-security -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -fpic -L/usr/local/gcc13/lib64 -L/usr/local/lib64 -o lassoshooting.so ccd_common.o ccd_r.o softthresh_r.o -L/data/gannet/ripley/R/R-devel/lib -lRblas -lgfortran -lm -lquadmath make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/lassoshooting/src' make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/lassoshooting/src' make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/lassoshooting/src' installing to /data/gannet/ripley/R/packages/tests-devel/lassoshooting.Rcheck/00LOCK-lassoshooting/00new/lassoshooting/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (lassoshooting)