* installing *source* package ‘hierNest’ ... ** this is package ‘hierNest’ version ‘1.0.2’ ** package ‘hierNest’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘gcc (GCC) 15.2.1 20260123 (Red Hat 15.2.1-7)’ using Fortran compiler: ‘GNU Fortran (GCC) 15.2.1 20260123 (Red Hat 15.2.1-7)’ make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/hierNest/src' gfortran -fpic -g -O2 -mtune=native -Wall -pedantic -c spmatmul.f90 -o spmatmul.o gfortran -fpic -g -O2 -mtune=native -Wall -pedantic -c log_sgl_subfuns.f90 -o log_sgl_subfuns.o log_sgl_subfuns.f90:50:13: 50 | subgp_ix = drgix(i) - drgix(startsubgp) +2 | 1 Warning: Nonconforming tab character at (1) [-Wtabs] log_sgl_subfuns.f90:51:12: 51 | subgp_iy = drgiy(i) - drgix(startsubgp) +2 | 1 Warning: Nonconforming tab character at (1) [-Wtabs] log_sgl_subfuns.f90:150:11: 150 | subgp_ix = drgix(i) - drgix(startsubgp) +2 | 1 Warning: Nonconforming tab character at (1) [-Wtabs] log_sgl_subfuns.f90:151:10: 151 | subgp_iy = drgiy(i) - drgix(startsubgp) +2 | 1 Warning: Nonconforming tab character at (1) [-Wtabs] log_sgl_subfuns.f90:15:27: 15 | DOUBLE PRECISION :: ss | 1~ Warning: Unused variable ‘ss’ declared at (1) [-Wunused-variable] gfortran -fpic -g -O2 -mtune=native -Wall -pedantic -c sgl_subfuns.f90 -o sgl_subfuns.o sgl_subfuns.f90:62:10: 62 | enddrg=cn_e(g) | 1 Warning: Nonconforming tab character at (1) [-Wtabs] sgl_subfuns.f90:63:10: 63 | theta_tilt=b(startix:endix) | 1 Warning: Nonconforming tab character at (1) [-Wtabs] sgl_subfuns.f90:66:10: 66 | DO drginx = startdrg, enddrg | 1 Warning: Nonconforming tab character at (1) [-Wtabs] sgl_subfuns.f90:67:10: 67 | drgstartinx=drgix(drginx) | 1 Warning: Nonconforming tab character at (1) [-Wtabs] sgl_subfuns.f90:68:10: 68 | drgendinx=drgiy(drginx) | 1 Warning: Nonconforming tab character at (1) [-Wtabs] sgl_subfuns.f90:78:10: 78 | ENDDO | 1 Warning: Nonconforming tab character at (1) [-Wtabs] sgl_subfuns.f90:229:12: 229 | DO drginx = startdrg, enddrg | 1 Warning: Nonconforming tab character at (1) [-Wtabs] sgl_subfuns.f90:230:12: 230 | drgstartinx=drgix(drginx) | 1 Warning: Nonconforming tab character at (1) [-Wtabs] sgl_subfuns.f90:231:12: 231 | drgendinx=drgiy(drginx) | 1 Warning: Nonconforming tab character at (1) [-Wtabs] sgl_subfuns.f90:242:12: 242 | ENDDO | 1 Warning: Nonconforming tab character at (1) [-Wtabs] sgl_subfuns.f90:409:12: 409 | DO drginx = startdrg, enddrg | 1 Warning: Nonconforming tab character at (1) [-Wtabs] sgl_subfuns.f90:410:12: 410 | drgstartinx=drgix(drginx) | 1 Warning: Nonconforming tab character at (1) [-Wtabs] sgl_subfuns.f90:411:12: 411 | drgendinx=drgiy(drginx) | 1 Warning: Nonconforming tab character at (1) [-Wtabs] sgl_subfuns.f90:420:12: 420 | ENDDO | 1 Warning: Nonconforming tab character at (1) [-Wtabs] gfortran -fpic -g -O2 -mtune=native -Wall -pedantic -c sparsegl.f90 -o sparsegl.o sparsegl.f90:222:14: 222 | DO drginx = startdrg, enddrg | 1 Warning: Nonconforming tab character at (1) [-Wtabs] sparsegl.f90:223:14: 223 | drgstartinx=drgix(drginx) | 1 Warning: Nonconforming tab character at (1) [-Wtabs] sparsegl.f90:224:14: 224 | drgendinx=drgiy(drginx) | 1 Warning: Nonconforming tab character at (1) [-Wtabs] sparsegl.f90:233:14: 233 | ENDDO | 1 Warning: Nonconforming tab character at (1) [-Wtabs] sparsegl.f90:520:14: 520 | DO drginx = startdrg, enddrg | 1 Warning: Nonconforming tab character at (1) [-Wtabs] sparsegl.f90:521:14: 521 | drgstartinx=drgix(drginx) | 1 Warning: Nonconforming tab character at (1) [-Wtabs] sparsegl.f90:522:14: 522 | drgendinx=drgiy(drginx) | 1 Warning: Nonconforming tab character at (1) [-Wtabs] sparsegl.f90:531:14: 531 | ENDDO | 1 Warning: Nonconforming tab character at (1) [-Wtabs] sparsegl.f90:23:22: 23 | INTEGER:: endsubgp,drgdim | 1~~~~~ Warning: Unused variable ‘drgdim’ declared at (1) [-Wunused-variable] sparsegl.f90:316:22: 316 | INTEGER:: endsubgp,drgdim | 1~~~~~ Warning: Unused variable ‘drgdim’ declared at (1) [-Wunused-variable] gfortran -fpic -g -O2 -mtune=native -Wall -pedantic -c sparsegllog.f90 -o sparsegllog.o sparsegllog.f90:236:14: 236 | DO drginx = startdrg, enddrg | 1 Warning: Nonconforming tab character at (1) [-Wtabs] sparsegllog.f90:237:14: 237 | drgstartinx=drgix(drginx) | 1 Warning: Nonconforming tab character at (1) [-Wtabs] sparsegllog.f90:238:14: 238 | drgendinx=drgiy(drginx) | 1 Warning: Nonconforming tab character at (1) [-Wtabs] sparsegllog.f90:247:14: 247 | ENDDO | 1 Warning: Nonconforming tab character at (1) [-Wtabs] sparsegllog.f90:550:14: 550 | DO drginx = startdrg, enddrg | 1 Warning: Nonconforming tab character at (1) [-Wtabs] sparsegllog.f90:551:14: 551 | drgstartinx=drgix(drginx) | 1 Warning: Nonconforming tab character at (1) [-Wtabs] sparsegllog.f90:552:14: 552 | drgendinx=drgiy(drginx) | 1 Warning: Nonconforming tab character at (1) [-Wtabs] sparsegllog.f90:561:14: 561 | ENDDO | 1 Warning: Nonconforming tab character at (1) [-Wtabs] sparsegllog.f90:22:22: 22 | INTEGER:: endsubgp,drgdim | 1~~~~~ Warning: Unused variable ‘drgdim’ declared at (1) [-Wunused-variable] sparsegllog.f90:336:22: 336 | INTEGER:: endsubgp,drgdim | 1~~~~~ Warning: Unused variable ‘drgdim’ declared at (1) [-Wunused-variable] gfortran -fpic -g -O2 -mtune=native -Wall -pedantic -c wsgl.f90 -o wsgl.o wsgl.f90:3:25: 3 | npass,jerr,alsparse1,alsparse2,lb,ub,sset,eset,b0old,betaold,al0,findlambda,l,me,cn) | 1~~~~~~~~ Warning: Unused dummy argument ‘alsparse2’ at (1) [-Wunused-dummy-argument] wsgl.f90:219:25: 219 | npass,jerr,alsparse1,alsparse2,lb,ub,sset,eset,b0old,betaold,al0,findlambda,l,me,cn) | 1~~~~~~~~ Warning: Unused dummy argument ‘alsparse2’ at (1) [-Wunused-dummy-argument] gcc -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c sparsegl_init.c -o sparsegl_init.o gcc -shared -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -fpic -L/usr/local/lib64 -o hierNest.so log_sgl_subfuns.o sgl_subfuns.o sparsegl.o sparsegl_init.o sparsegllog.o spmatmul.o wsgl.o -llapack -L/data/gannet/ripley/R/R-devel/lib -lRblas -lgfortran -lm -lquadmath -lgfortran -lm -lquadmath make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/hierNest/src' make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/hierNest/src' make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/hierNest/src' installing to /data/gannet/ripley/R/packages/tests-devel/hierNest.Rcheck/00LOCK-hierNest/00new/hierNest/libs ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (hierNest)