* installing *source* package ‘handwriter’ ...
** package ‘handwriter’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C++ compiler: ‘g++-13 (GCC) 13.2.0’
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/handwriter/src'
g++-13 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/RcppArmadillo/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c CleanBinaryImage.cpp -o CleanBinaryImage.o
g++-13 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/RcppArmadillo/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c MeasurementsCpp.cpp -o MeasurementsCpp.o
g++-13 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/RcppArmadillo/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c RcppExports.cpp -o RcppExports.o
g++-13 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/RcppArmadillo/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c ThinImageCpp.cpp -o ThinImageCpp.o
CleanBinaryImage.cpp: In function 'bool checkMask(arma::mat&, int, int, arma::umat)':
CleanBinaryImage.cpp:247:41: warning: comparison of integer expressions of different signedness: 'int' and 'const arma::uword' {aka 'const unsigned int'} [-Wsign-compare]
247 | if(row < 0 || col < 0 || row+rowCount >= img.n_rows || col+colCount >= img.n_cols)
| ~~~~~~~~~~~~~^~~~~~~~~~~~~
CleanBinaryImage.cpp:247:71: warning: comparison of integer expressions of different signedness: 'int' and 'const arma::uword' {aka 'const unsigned int'} [-Wsign-compare]
247 | if(row < 0 || col < 0 || row+rowCount >= img.n_rows || col+colCount >= img.n_cols)
| ~~~~~~~~~~~~~^~~~~~~~~~~~~
ThinImageCpp.cpp: In function 'arma::cube rgba2rgb(arma::cube)':
ThinImageCpp.cpp:37:22: warning: comparison of integer expressions of different signedness: 'int' and 'const arma::uword' {aka 'const unsigned int'} [-Wsign-compare]
37 | for(int i = 0; i < img.n_rows; i++)
| ~~^~~~~~~~~~~~
ThinImageCpp.cpp:39:24: warning: comparison of integer expressions of different signedness: 'int' and 'const arma::uword' {aka 'const unsigned int'} [-Wsign-compare]
39 | for(int j = 0; j < img.n_cols; j++)
| ~~^~~~~~~~~~~~
ThinImageCpp.cpp: In function 'arma::mat rgb2grayscale(arma::cube)':
ThinImageCpp.cpp:64:20: warning: comparison of integer expressions of different signedness: 'int' and 'const arma::uword' {aka 'const unsigned int'} [-Wsign-compare]
64 | for(int i = 0; i < img.n_rows; i++)
| ~~^~~~~~~~~~~~
ThinImageCpp.cpp:66:22: warning: comparison of integer expressions of different signedness: 'int' and 'const arma::uword' {aka 'const unsigned int'} [-Wsign-compare]
66 | for(int j = 0; j < img.n_cols; j++)
| ~~^~~~~~~~~~~~
ThinImageCpp.cpp: In function 'arma::uvec whichToFill(arma::mat)':
ThinImageCpp.cpp:90:20: warning: comparison of integer expressions of different signedness: 'int' and 'const arma::uword' {aka 'const unsigned int'} [-Wsign-compare]
90 | for(int i = 0; i < img.n_elem; i++)
| ~~^~~~~~~~~~~~
ThinImageCpp.cpp: In function 'void countBNeighbors_7or8(const arma::mat&, arma::uvec, arma::uvec&)':
ThinImageCpp.cpp:110:20: warning: comparison of integer expressions of different signedness: 'int' and 'const arma::uword' {aka 'const unsigned int'} [-Wsign-compare]
110 | for(int i = 0; i < white.n_elem; i++)
| ~~^~~~~~~~~~~~~~
ThinImageCpp.cpp: In function 'arma::uvec thinImage(arma::mat)':
ThinImageCpp.cpp:189:25: warning: comparison of integer expressions of different signedness: 'int' and 'const arma::uword' {aka 'const unsigned int'} [-Wsign-compare]
189 | if(startingNumBlack == black.n_elem)
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~
ThinImageCpp.cpp: In function 'void count246(const arma::mat&, arma::uvec, arma::vec&)':
ThinImageCpp.cpp:203:20: warning: comparison of integer expressions of different signedness: 'int' and 'const arma::uword' {aka 'const unsigned int'} [-Wsign-compare]
203 | for(int i = 0; i < checkList.n_elem; i++)
| ~~^~~~~~~~~~~~~~~~~~
ThinImageCpp.cpp: In function 'void count468(const arma::mat&, arma::uvec, arma::vec&)':
ThinImageCpp.cpp:216:20: warning: comparison of integer expressions of different signedness: 'int' and 'const arma::uword' {aka 'const unsigned int'} [-Wsign-compare]
216 | for(int i = 0; i < checkList.n_elem; i++)
| ~~^~~~~~~~~~~~~~~~~~
ThinImageCpp.cpp: In function 'void count248(const arma::mat&, arma::uvec, arma::vec&)':
ThinImageCpp.cpp:229:20: warning: comparison of integer expressions of different signedness: 'int' and 'const arma::uword' {aka 'const unsigned int'} [-Wsign-compare]
229 | for(int i = 0; i < checkList.n_elem; i++)
| ~~^~~~~~~~~~~~~~~~~~
ThinImageCpp.cpp: In function 'void count268(const arma::mat&, arma::uvec, arma::vec&)':
ThinImageCpp.cpp:242:20: warning: comparison of integer expressions of different signedness: 'int' and 'const arma::uword' {aka 'const unsigned int'} [-Wsign-compare]
242 | for(int i = 0; i < checkList.n_elem; i++)
| ~~^~~~~~~~~~~~~~~~~~
ThinImageCpp.cpp: In function 'void countBNeighbors(const arma::mat&, arma::uvec, arma::vec&)':
ThinImageCpp.cpp:257:20: warning: comparison of integer expressions of different signedness: 'int' and 'const arma::uword' {aka 'const unsigned int'} [-Wsign-compare]
257 | for(int i = 0; i < checkList.n_elem; i++)
| ~~^~~~~~~~~~~~~~~~~~
ThinImageCpp.cpp: In function 'void countWBTransitions(const arma::mat&, arma::uvec, arma::vec&)':
ThinImageCpp.cpp:275:20: warning: comparison of integer expressions of different signedness: 'int' and 'const arma::uword' {aka 'const unsigned int'} [-Wsign-compare]
275 | for(int i = 0; i < checkList.n_elem; i++)
| ~~^~~~~~~~~~~~~~~~~~
g++-13 -std=gnu++17 -shared -L/usr/local/gcc13/lib64 -L/usr/local/lib64 -L/usr/local/clang18/lib/x86_64-unknown-linux-gnu -o handwriter.so CleanBinaryImage.o MeasurementsCpp.o RcppExports.o ThinImageCpp.o
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/handwriter/src'
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/handwriter/src'
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/handwriter/src'
installing to /data/gannet/ripley/R/packages/tests-devel/handwriter.Rcheck/00LOCK-handwriter/00new/handwriter/libs
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
*** copying figures
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (handwriter)