• using R Under development (unstable) (2026-02-03 r89374)
• using platform: x86_64-pc-linux-gnu
• R was compiled by     gcc (GCC) 15.1.1 20250521 (Red Hat 15.1.1-2)     GNU Fortran (GCC) 15.1.1 20250521 (Red Hat 15.1.1-2)
• running under: Fedora Linux 42 (Workstation Edition)
• using session charset: UTF-8 * current time: 2026-02-03 14:09:44Z
• using option ‘--no-stop-on-test-error’
• checking for file ‘gipsDA/DESCRIPTION’ ... OK
• this is package ‘gipsDA’ version ‘0.1.2’
• package encoding: UTF-8
• checking package namespace information ... OK
• checking package dependencies ... OK
• checking if this is a source package ... OK
• checking if there is a namespace ... OK
• checking for executable files ... OK
• checking for hidden files and directories ... OK
• checking for portable file names ... OK
• checking for sufficient/correct file permissions ... OK
• checking whether package ‘gipsDA’ can be installed ... [8s/18s] OK See the install log for details.
• checking package directory ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking for left-over files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking code files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... OK
• checking whether the package can be loaded with stated dependencies ... OK
• checking whether the package can be unloaded cleanly ... OK
• checking whether the namespace can be loaded with stated dependencies ... OK
• checking whether the namespace can be unloaded cleanly ... OK
• checking loading without being on the library search path ... OK
• checking use of S3 registration ... OK
• checking dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... [16s/23s] OK
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• checking Rd metadata ... OK
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• checking Rd cross-references ... OK
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking Rd contents ... OK
• checking for unstated dependencies in examples ... OK
• checking R/sysdata.rda ... OK
• checking examples ... [10s/14s] ERROR Running examples in ‘gipsDA-Ex.R’ failed The error most likely occurred in: > ### Name: gipslda > ### Title: Linear Discriminant Analysis with gips Covariance Projection > ### Aliases: gipslda gipslda.default gipslda.data.frame gipslda.formula > ### gipslda.matrix model.frame.gipslda print.gipslda coef.gipslda > ### plot.gipslda pairs.gipslda > ### Keywords: multivariate > > ### ** Examples > > Iris <- data.frame(rbind(iris3[, , 1], iris3[, , 2], iris3[, , 3]), + Sp = rep(c("s", "c", "v"), rep(50, 3)) + ) Error: object 'iris3' not found Execution halted
• checking for unstated dependencies in ‘tests’ ... OK
• checking tests ... [11s/14s] ERROR   Running ‘testthat.R’ [11s/14s] Running the tests in ‘tests/testthat.R’ failed. Complete output:   > # This file is part of the standard setup for testthat.   > # It is recommended that you do not modify it.   > #   > # Where should you do additional test configuration?   > # Learn more about the roles of various files in:   > # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview   > # * https://testthat.r-lib.org/articles/special-files.html   >   > library(testthat)   > library(gipsDA)   >   > test_check("gipsDA")   The permutation ():    - is 1 times more likely than the () permutation.   ========Saving _problems/test-models_gipsLDA-9.R   Saving _problems/test-models_gipsMultQDA-7.R   Saving _problems/test-models_gipsQDA-7.R   Saving _problems/test-models_utils-130.R   Saving _problems/test-models_utils-148.R   Saving _problems/test-models_utils-163.R   [ FAIL 6 | WARN 6 | SKIP 0 | PASS 81 ]      ══ Failed tests ════════════════════════════════════════════════════════════════   ── Error ('test-models_gipsLDA.R:9:1'): (code run outside of `test_that()`) ────   Error in `eval(code, test_env)`: object 'iris' not found   Backtrace:       ▆    1. └─base::as.matrix(iris[, 1:4]) at test-models_gipsLDA.R:9:1   ── Error ('test-models_gipsMultQDA.R:7:1'): (code run outside of `test_that()`) ──   Error in `eval(code, test_env)`: object 'iris' not found   Backtrace:       ▆    1. └─base::as.matrix(iris[, 1:4]) at test-models_gipsMultQDA.R:7:1   ── Error ('test-models_gipsQDA.R:7:1'): (code run outside of `test_that()`) ────   Error in `eval(code, test_env)`: object 'iris' not found   Backtrace:       ▆    1. └─base::as.matrix(iris[, 1:4]) at test-models_gipsQDA.R:7:1   ── Error ('test-models_utils.R:130:3'): project_covs (MAP=TRUE) returns correct structure using Iris data ──   Error in `setup_data()`: object 'iris' not found   Backtrace:       ▆    1. └─gipsDA (local) setup_data() at test-models_utils.R:130:3   ── Error ('test-models_utils.R:148:3'): project_covs (MAP=FALSE) handles probabilities using Iris data ──   Error in `setup_data()`: object 'iris' not found   Backtrace:       ▆    1. └─gipsDA (local) setup_data() at test-models_utils.R:148:3   ── Error ('test-models_utils.R:163:3'): project_covs warns if all probabilities are below tolerance ──   Error in `setup_data()`: object 'iris' not found   Backtrace:       ▆    1. └─gipsDA (local) setup_data() at test-models_utils.R:163:3      [ FAIL 6 | WARN 6 | SKIP 0 | PASS 81 ]   Error:   ! Test failures.   Execution halted
• checking PDF version of manual ... OK
• checking HTML version of manual ... OK
• checking for non-standard things in the check directory ... OK
• checking for detritus in the temp directory ... OK
• DONE

Status: 2 ERRORs