* installing *source* package ‘geoBayes’ ...
** this is package ‘geoBayes’ version ‘0.7.4’
** package ‘geoBayes’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C compiler: ‘gcc (GCC) 15.1.1 20250521 (Red Hat 15.1.1-2)’
using Fortran compiler: ‘GNU Fortran (GCC) 15.1.1 20250521 (Red Hat 15.1.1-2)’
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/geoBayes/src'
gcc -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c auxfcns.c -o auxfcns.o
gcc -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c msg.c -o msg.o
gcc -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c register_dll.c -o register_dll.o
gfortran -fpic -g -O2 -mtune=native -Wall -pedantic -c interfaces.f90 -o interfaces.o
gfortran -fpic -g -O2 -mtune=native -Wall -pedantic -c msgmc.f90 -o msgmc.o
gfortran -fpic -g -O2 -mtune=native -Wall -pedantic -c flogsumexp.f90 -o flogsumexp.o
gfortran -fpic -g -O2 -mtune=native -Wall -pedantic -c lbfgsbmod.f90 -o lbfgsbmod.o
lbfgsbmod.f90:2423:32:
2423 | col, head, iword, wv, wn, iprint, info)
| 1~~~~~
Warning: Unused dummy argument ‘iprint’ at (1) [-Wunused-dummy-argument]
lbfgsbmod.f90:1956:35:
1956 | iwhere, wrk, updatd, cnstnd, iprint, iter)
| 1~~~~~
Warning: Unused dummy argument ‘iprint’ at (1) [-Wunused-dummy-argument]
lbfgsbmod.f90:966:23:
966 | v, nint, sg, yg, iprint, sbgnrm, info, epsmch)
| 1~~~~~
Warning: Unused dummy argument ‘iprint’ at (1) [-Wunused-dummy-argument]
lbfgsbmod.f90:966:15:
966 | v, nint, sg, yg, iprint, sbgnrm, info, epsmch)
| 1~
Warning: Unused dummy argument ‘sg’ at (1) [-Wunused-dummy-argument]
lbfgsbmod.f90:966:19:
966 | v, nint, sg, yg, iprint, sbgnrm, info, epsmch)
| 1~
Warning: Unused dummy argument ‘yg’ at (1) [-Wunused-dummy-argument]
lbfgsbmod.f90:757:46:
757 | subroutine active(n, l, u, nbd, x, iwhere, iprint, &
| 1~~~~~
Warning: Unused dummy argument ‘iprint’ at (1) [-Wunused-dummy-argument]
lbfgsbmod.f90:145:6:
145 | sgo, yg, ygo, index, iwhere, indx2, task, &
| 1~~
Warning: Unused dummy argument ‘sgo’ at (1) [-Wunused-dummy-argument]
lbfgsbmod.f90:145:15:
145 | sgo, yg, ygo, index, iwhere, indx2, task, &
| 1~~
Warning: Unused dummy argument ‘ygo’ at (1) [-Wunused-dummy-argument]
lbfgsbmod.f90:144:14:
144 | sy, ss, yy, wt, wn, snd, z, r, d, t, wa, sg, &
| 1~
Warning: Unused dummy argument ‘yy’ at (1) [-Wunused-dummy-argument]
lbfgsbmod.f90:2662:17:
2662 | dk = d(ibd)
| ^
Warning: ‘ibd’ may be used uninitialized [-Wmaybe-uninitialized]
lbfgsbmod.f90:2580:40:
2580 | integer :: pointr,m2,col2,ibd,jy,js,i,j,k
| ^~~
note: ‘ibd’ was declared here
lbfgsbmod.f90:1227:33:
1227 | t(nbreak) = tl/(-neggi)
| ^
Warning: ‘tl’ may be used uninitialized [-Wmaybe-uninitialized]
lbfgsbmod.f90:1156:11:
1156 | tu,tl,wmc,wmp,wmw,ddot,tj,tj0,neggi,sbgnrm, &
| ^~
note: ‘tl’ was declared here
lbfgsbmod.f90:1156:8:
1156 | tu,tl,wmc,wmp,wmw,ddot,tj,tj0,neggi,sbgnrm, &
| ^~
Warning: ‘tu’ may be used uninitialized [-Wmaybe-uninitialized]
lbfgsbmod.f90:338:36:
338 | integer :: i,k,nintol,itfile,iback,nskip, &
| ^~~~~~
Warning: ‘itfile’ may be used uninitialized [-Wmaybe-uninitialized]
lbfgsbmod.f90:341:20:
341 | iword,nfree,nact,ileave,nenter
| ^~~~
Warning: ‘nact’ may be used uninitialized [-Wmaybe-uninitialized]
lbfgsbmod.f90:343:26:
343 | xstep,sbgnrm,ddum,dnorm,dtd,epsmch, &
| ^~~~~
Warning: ‘dnorm’ may be used uninitialized [-Wmaybe-uninitialized]
lbfgsbmod.f90:343:32:
343 | xstep,sbgnrm,ddum,dnorm,dtd,epsmch, &
| ^~~
Warning: ‘dtd’ may be used uninitialized [-Wmaybe-uninitialized]
lbfgsbmod.f90:342:31:
342 | double precision :: theta,fold,ddot,dr,rr,tol, &
| ^~~~
Warning: ‘fold’ may be used uninitialized [-Wmaybe-uninitialized]
lbfgsbmod.f90:344:8:
344 | gd,gdold,stp,stpmx
| ^~
Warning: ‘gd’ may be used uninitialized [-Wmaybe-uninitialized]
lbfgsbmod.f90:344:11:
344 | gd,gdold,stp,stpmx
| ^~~~~
Warning: ‘gdold’ may be used uninitialized [-Wmaybe-uninitialized]
lbfgsbmod.f90:338:43:
338 | integer :: i,k,nintol,itfile,iback,nskip, &
| ^~~~~
Warning: ‘iback’ may be used uninitialized [-Wmaybe-uninitialized]
lbfgsbmod.f90:340:23:
340 | nint,nfgv,info,ifun, &
| ^~~~
Warning: ‘ifun’ may be used uninitialized [-Wmaybe-uninitialized]
lbfgsbmod.f90:341:25:
341 | iword,nfree,nact,ileave,nenter
| ^~~~~~
Warning: ‘ileave’ may be used uninitialized [-Wmaybe-uninitialized]
lbfgsbmod.f90:339:22:
339 | head,col,iter,itail,iupdat, &
| ^~~~~
Warning: ‘itail’ may be used uninitialized [-Wmaybe-uninitialized]
lbfgsbmod.f90:341:8:
341 | iword,nfree,nact,ileave,nenter
| ^~~~~
Warning: ‘iword’ may be used uninitialized [-Wmaybe-uninitialized]
lbfgsbmod.f90:737:22:
737 | isave(20) = nenter
| ^
Warning: ‘nenter’ may be used uninitialized [-Wmaybe-uninitialized]
lbfgsbmod.f90:341:32:
341 | iword,nfree,nact,ileave,nenter
| ^~~~~~
note: ‘nenter’ was declared here
lbfgsbmod.f90:344:21:
344 | gd,gdold,stp,stpmx
| ^~~~~
Warning: ‘stpmx’ may be used uninitialized [-Wmaybe-uninitialized]
gfortran -fpic -g -O2 -mtune=native -Wall -pedantic -c cor_fcns.f90 -o cor_fcns.o
cor_fcns.f90:555:53:
555 | pure double precision function cor_hk_gaussian (h,kappa) result (c)
| 1~~~~
Warning: Unused dummy argument ‘kappa’ at (1) [-Wunused-dummy-argument]
cor_fcns.f90:543:53:
543 | pure double precision function cor_hh_gaussian (h,kappa) result (c)
| 1~~~~
Warning: Unused dummy argument ‘kappa’ at (1) [-Wunused-dummy-argument]
cor_fcns.f90:533:55:
533 | pure double precision function cor_dhdk_gaussian (h,kappa) result (c)
| 1~~~~
Warning: Unused dummy argument ‘kappa’ at (1) [-Wunused-dummy-argument]
cor_fcns.f90:523:53:
523 | pure double precision function cor_dk_gaussian (h,kappa) result (c)
| 1~~~~
Warning: Unused dummy argument ‘kappa’ at (1) [-Wunused-dummy-argument]
cor_fcns.f90:511:53:
511 | pure double precision function cor_dh_gaussian (h,kappa) result (c)
| 1~~~~
Warning: Unused dummy argument ‘kappa’ at (1) [-Wunused-dummy-argument]
cor_fcns.f90:499:50:
499 | pure double precision function cor_gaussian (h,kappa) result (c)
| 1~~~~
Warning: Unused dummy argument ‘kappa’ at (1) [-Wunused-dummy-argument]
cor_fcns.f90:488:48:
488 | pure double precision function cor_hk_exp (h,kappa) result (c)
| 1~~~~
Warning: Unused dummy argument ‘kappa’ at (1) [-Wunused-dummy-argument]
cor_fcns.f90:476:48:
476 | pure double precision function cor_hh_exp (h,kappa) result (c)
| 1~~~~
Warning: Unused dummy argument ‘kappa’ at (1) [-Wunused-dummy-argument]
cor_fcns.f90:466:50:
466 | pure double precision function cor_dhdk_exp (h,kappa) result (c)
| 1~~~~
Warning: Unused dummy argument ‘kappa’ at (1) [-Wunused-dummy-argument]
cor_fcns.f90:456:48:
456 | pure double precision function cor_dk_exp (h,kappa) result (c)
| 1~~~~
Warning: Unused dummy argument ‘kappa’ at (1) [-Wunused-dummy-argument]
cor_fcns.f90:444:48:
444 | pure double precision function cor_dh_exp (h,kappa) result (c)
| 1~~~~
Warning: Unused dummy argument ‘kappa’ at (1) [-Wunused-dummy-argument]
cor_fcns.f90:432:45:
432 | pure double precision function cor_exp (h,kappa) result (c)
| 1~~~~
Warning: Unused dummy argument ‘kappa’ at (1) [-Wunused-dummy-argument]
cor_fcns.f90:281:50:
281 | pure double precision function cor_hk_spher (h,kappa) result (c)
| 1~~~~
Warning: Unused dummy argument ‘kappa’ at (1) [-Wunused-dummy-argument]
cor_fcns.f90:271:52:
271 | pure double precision function cor_dhdk_spher (h,kappa) result (c)
| 1~~~~
Warning: Unused dummy argument ‘kappa’ at (1) [-Wunused-dummy-argument]
cor_fcns.f90:257:50:
257 | pure double precision function cor_hh_spher (h,kappa) result (c)
| 1~~~~
Warning: Unused dummy argument ‘kappa’ at (1) [-Wunused-dummy-argument]
cor_fcns.f90:247:50:
247 | pure double precision function cor_dk_spher (h,kappa) result (c)
| 1~~~~
Warning: Unused dummy argument ‘kappa’ at (1) [-Wunused-dummy-argument]
cor_fcns.f90:233:50:
233 | pure double precision function cor_dh_spher (h,kappa) result (c)
| 1~~~~
Warning: Unused dummy argument ‘kappa’ at (1) [-Wunused-dummy-argument]
cor_fcns.f90:219:47:
219 | pure double precision function cor_spher (h,kappa) result (c)
| 1~~~~
Warning: Unused dummy argument ‘kappa’ at (1) [-Wunused-dummy-argument]
cor_fcns.f90:196:24:
196 | if (h .eq. 0d0) then
| ^
Warning: ‘c’ may be used uninitialized [-Wmaybe-uninitialized]
cor_fcns.f90:193:67:
193 | pure double precision function cor_hk_matern (h,kappa) result (c)
| ^
note: ‘c’ was declared here
cor_fcns.f90:173:24:
173 | if (h .eq. 0d0) then
| ^
Warning: ‘c’ may be used uninitialized [-Wmaybe-uninitialized]
cor_fcns.f90:170:69:
170 | pure double precision function cor_dhdk_matern (h,kappa) result (c)
| ^
note: ‘c’ was declared here
cor_fcns.f90:150:24:
150 | if (h .eq. 0d0) then
| ^
Warning: ‘c’ may be used uninitialized [-Wmaybe-uninitialized]
cor_fcns.f90:147:67:
147 | pure double precision function cor_dk_matern (h,kappa) result (c)
| ^
note: ‘c’ was declared here
cor_fcns.f90:118:24:
118 | if (h .eq. 0d0) then
| ^
Warning: ‘c’ may be used uninitialized [-Wmaybe-uninitialized]
cor_fcns.f90:115:67:
115 | pure double precision function cor_hh_matern (h,kappa) result (c)
| ^
note: ‘c’ was declared here
cor_fcns.f90:87:24:
87 | if (h .eq. 0d0) then
| ^
Warning: ‘c’ may be used uninitialized [-Wmaybe-uninitialized]
cor_fcns.f90:84:67:
84 | pure double precision function cor_dh_matern (h,kappa) result (c)
| ^
note: ‘c’ was declared here
cor_fcns.f90:82:25:
82 | end function cor_matern
| ^
Warning: ‘c’ may be used uninitialized [-Wmaybe-uninitialized]
cor_fcns.f90:64:64:
64 | pure double precision function cor_matern (h,kappa) result (c)
| ^
note: ‘c’ was declared here
gfortran -fpic -g -O2 -mtune=native -Wall -pedantic -c betaprior.f90 -o betaprior.o
gfortran -fpic -g -O2 -mtune=native -Wall -pedantic -c tcdfder.f90 -o tcdfder.o
tcdfder.f90:738:37:
738 | DATA S, C, S3, S4, S5, D1 /1.d-05, 8.5d0, 8.333333333d-02, &
| 1
Warning: Change of value in conversion from ‘REAL(8)’ to ‘REAL(4)’ at (1) [-Wconversion]
tcdfder.f90:738:61:
738 | DATA S, C, S3, S4, S5, D1 /1.d-05, 8.5d0, 8.333333333d-02, &
| 1
Warning: Change of value in conversion from ‘REAL(8)’ to ‘REAL(4)’ at (1) [-Wconversion]
tcdfder.f90:739:23:
739 | 8.3333333333d-03, 3.968253968d-03, -0.5772156649/
| 1
Warning: Change of value in conversion from ‘REAL(8)’ to ‘REAL(4)’ at (1) [-Wconversion]
tcdfder.f90:739:40:
739 | 8.3333333333d-03, 3.968253968d-03, -0.5772156649/
| 1
Warning: Change of value in conversion from ‘REAL(8)’ to ‘REAL(4)’ at (1) [-Wconversion]
gfortran -fpic -g -O2 -mtune=native -Wall -pedantic -c linkdz.f90 -o linkdz.o
gfortran -fpic -g -O2 -mtune=native -Wall -pedantic -c bmargin.f90 -o bmargin.o
gfortran -fpic -g -O2 -mtune=native -Wall -pedantic -c modelfcns_link.f90 -o modelfcns_link.o
modelfcns_link.f90:364:49:
364 | pure elemental function invlinkdzhn_probit (z,d) result (y)
| 1
Warning: Unused dummy argument ‘d’ at (1) [-Wunused-dummy-argument]
modelfcns_link.f90:364:47:
364 | pure elemental function invlinkdzhn_probit (z,d) result (y)
| 1
Warning: Unused dummy argument ‘z’ at (1) [-Wunused-dummy-argument]
modelfcns_link.f90:357:49:
357 | pure elemental function invlinkhzdn_probit (z,d) result (y)
| 1
Warning: Unused dummy argument ‘d’ at (1) [-Wunused-dummy-argument]
modelfcns_link.f90:357:47:
357 | pure elemental function invlinkhzdn_probit (z,d) result (y)
| 1
Warning: Unused dummy argument ‘z’ at (1) [-Wunused-dummy-argument]
modelfcns_link.f90:350:49:
350 | pure elemental function invlinkdzdn_probit (z,d) result (y)
| 1
Warning: Unused dummy argument ‘d’ at (1) [-Wunused-dummy-argument]
modelfcns_link.f90:350:47:
350 | pure elemental function invlinkdzdn_probit (z,d) result (y)
| 1
Warning: Unused dummy argument ‘z’ at (1) [-Wunused-dummy-argument]
modelfcns_link.f90:343:47:
343 | pure elemental function invlinkhn_probit (z,d) result (y)
| 1
Warning: Unused dummy argument ‘d’ at (1) [-Wunused-dummy-argument]
modelfcns_link.f90:343:45:
343 | pure elemental function invlinkhn_probit (z,d) result (y)
| 1
Warning: Unused dummy argument ‘z’ at (1) [-Wunused-dummy-argument]
modelfcns_link.f90:336:47:
336 | pure elemental function invlinkdn_probit (z,d) result (y)
| 1
Warning: Unused dummy argument ‘d’ at (1) [-Wunused-dummy-argument]
modelfcns_link.f90:336:45:
336 | pure elemental function invlinkdn_probit (z,d) result (y)
| 1
Warning: Unused dummy argument ‘z’ at (1) [-Wunused-dummy-argument]
modelfcns_link.f90:302:50:
302 | pure elemental function loginvlinkdz_probit (z,d) result (y)
| 1
Warning: Unused dummy argument ‘d’ at (1) [-Wunused-dummy-argument]
modelfcns_link.f90:291:47:
291 | pure elemental function invlinkdz_probit (z,d) result (y)
| 1
Warning: Unused dummy argument ‘d’ at (1) [-Wunused-dummy-argument]
modelfcns_link.f90:282:45:
282 | pure elemental function invlink_probit (z,d) result (w)
| 1
Warning: Unused dummy argument ‘d’ at (1) [-Wunused-dummy-argument]
modelfcns_link.f90:273:43:
273 | pure elemental function flink_probit (w,d) result (z)
| 1
Warning: Unused dummy argument ‘d’ at (1) [-Wunused-dummy-argument]
modelfcns_link.f90:264:48:
264 | pure elemental function invlinkdzhn_logit (z,d) result (y)
| 1
Warning: Unused dummy argument ‘d’ at (1) [-Wunused-dummy-argument]
modelfcns_link.f90:264:46:
264 | pure elemental function invlinkdzhn_logit (z,d) result (y)
| 1
Warning: Unused dummy argument ‘z’ at (1) [-Wunused-dummy-argument]
modelfcns_link.f90:257:48:
257 | pure elemental function invlinkhzdn_logit (z,d) result (y)
| 1
Warning: Unused dummy argument ‘d’ at (1) [-Wunused-dummy-argument]
modelfcns_link.f90:257:46:
257 | pure elemental function invlinkhzdn_logit (z,d) result (y)
| 1
Warning: Unused dummy argument ‘z’ at (1) [-Wunused-dummy-argument]
modelfcns_link.f90:250:48:
250 | pure elemental function invlinkdzdn_logit (z,d) result (y)
| 1
Warning: Unused dummy argument ‘d’ at (1) [-Wunused-dummy-argument]
modelfcns_link.f90:250:46:
250 | pure elemental function invlinkdzdn_logit (z,d) result (y)
| 1
Warning: Unused dummy argument ‘z’ at (1) [-Wunused-dummy-argument]
modelfcns_link.f90:243:46:
243 | pure elemental function invlinkhn_logit (z,d) result (y)
| 1
Warning: Unused dummy argument ‘d’ at (1) [-Wunused-dummy-argument]
modelfcns_link.f90:243:44:
243 | pure elemental function invlinkhn_logit (z,d) result (y)
| 1
Warning: Unused dummy argument ‘z’ at (1) [-Wunused-dummy-argument]
modelfcns_link.f90:236:46:
236 | pure elemental function invlinkdn_logit (z,d) result (y)
| 1
Warning: Unused dummy argument ‘d’ at (1) [-Wunused-dummy-argument]
modelfcns_link.f90:236:44:
236 | pure elemental function invlinkdn_logit (z,d) result (y)
| 1
Warning: Unused dummy argument ‘z’ at (1) [-Wunused-dummy-argument]
modelfcns_link.f90:226:46:
226 | pure elemental function invlink3z_logit (z,d) result (y)
| 1
Warning: Unused dummy argument ‘d’ at (1) [-Wunused-dummy-argument]
modelfcns_link.f90:216:46:
216 | pure elemental function invlinkhz_logit (z,d) result (y)
| 1
Warning: Unused dummy argument ‘d’ at (1) [-Wunused-dummy-argument]
modelfcns_link.f90:206:49:
206 | pure elemental function loginvlinkdz_logit (z,d) result (y)
| 1
Warning: Unused dummy argument ‘d’ at (1) [-Wunused-dummy-argument]
modelfcns_link.f90:195:46:
195 | pure elemental function invlinkdz_logit (z,d) result (y)
| 1
Warning: Unused dummy argument ‘d’ at (1) [-Wunused-dummy-argument]
modelfcns_link.f90:186:44:
186 | pure elemental function invlink_logit (z,d) result (w)
| 1
Warning: Unused dummy argument ‘d’ at (1) [-Wunused-dummy-argument]
modelfcns_link.f90:177:42:
177 | pure elemental function flink_logit (w,d) result (z)
| 1
Warning: Unused dummy argument ‘d’ at (1) [-Wunused-dummy-argument]
gfortran -fpic -g -O2 -mtune=native -Wall -pedantic -c modelfcns_pdfy.f90 -o modelfcns_pdfy.o
modelfcns_pdfy.f90:430:64:
430 | pure elemental double precision function logpdfy3lnk_gm (y1, y2, par)
| 1~
Warning: Unused dummy argument ‘y2’ at (1) [-Wunused-dummy-argument]
modelfcns_pdfy.f90:420:64:
420 | pure elemental double precision function logpdfyhlnk_gm (y1, y2, par)
| 1~
Warning: Unused dummy argument ‘y2’ at (1) [-Wunused-dummy-argument]
modelfcns_pdfy.f90:347:60:
347 | pure elemental double precision function logpdfy3lnk_po (y1, y2, par)
| 1~
Warning: Unused dummy argument ‘y1’ at (1) [-Wunused-dummy-argument]
modelfcns_pdfy.f90:337:60:
337 | pure elemental double precision function logpdfyhlnk_po (y1, y2, par)
| 1~
Warning: Unused dummy argument ‘y1’ at (1) [-Wunused-dummy-argument]
modelfcns_pdfy.f90:248:60:
248 | pure elemental double precision function logpdfy3lnk_bi (y1, y2, par)
| 1~
Warning: Unused dummy argument ‘y1’ at (1) [-Wunused-dummy-argument]
modelfcns_pdfy.f90:231:60:
231 | pure elemental double precision function logpdfyhlnk_bi (y1, y2, par)
| 1~
Warning: Unused dummy argument ‘y1’ at (1) [-Wunused-dummy-argument]
modelfcns_pdfy.f90:169:57:
169 | pure elemental double precision function fcncumd3_ga (mu) result (w)
| 1~
Warning: Unused dummy argument ‘mu’ at (1) [-Wunused-dummy-argument]
modelfcns_pdfy.f90:162:57:
162 | pure elemental double precision function fcncumd2_ga (mu) result (w)
| 1~
Warning: Unused dummy argument ‘mu’ at (1) [-Wunused-dummy-argument]
modelfcns_pdfy.f90:139:68:
139 | pure elemental double precision function logpdfy3lnk_ga (y1, y2, par)
| 1~~
Warning: Unused dummy argument ‘par’ at (1) [-Wunused-dummy-argument]
modelfcns_pdfy.f90:139:60:
139 | pure elemental double precision function logpdfy3lnk_ga (y1, y2, par)
| 1~
Warning: Unused dummy argument ‘y1’ at (1) [-Wunused-dummy-argument]
modelfcns_pdfy.f90:139:64:
139 | pure elemental double precision function logpdfy3lnk_ga (y1, y2, par)
| 1~
Warning: Unused dummy argument ‘y2’ at (1) [-Wunused-dummy-argument]
modelfcns_pdfy.f90:129:68:
129 | pure elemental double precision function logpdfyhlnk_ga (y1, y2, par)
| 1~~
Warning: Unused dummy argument ‘par’ at (1) [-Wunused-dummy-argument]
modelfcns_pdfy.f90:129:60:
129 | pure elemental double precision function logpdfyhlnk_ga (y1, y2, par)
| 1~
Warning: Unused dummy argument ‘y1’ at (1) [-Wunused-dummy-argument]
modelfcns_pdfy.f90:89:57:
89 | pure elemental double precision function fcncumd3_gt (mu) result (w)
| 1~
Warning: Unused dummy argument ‘mu’ at (1) [-Wunused-dummy-argument]
modelfcns_pdfy.f90:82:57:
82 | pure elemental double precision function fcncumd2_gt (mu) result (w)
| 1~
Warning: Unused dummy argument ‘mu’ at (1) [-Wunused-dummy-argument]
modelfcns_pdfy.f90:69:59:
69 | pure elemental double precision function mustart_gt (y1,y2)
| 1~
Warning: Unused dummy argument ‘y2’ at (1) [-Wunused-dummy-argument]
modelfcns_pdfy.f90:59:68:
59 | pure elemental double precision function logpdfy3lnk_gt (y1, y2, par)
| 1~~
Warning: Unused dummy argument ‘par’ at (1) [-Wunused-dummy-argument]
modelfcns_pdfy.f90:59:60:
59 | pure elemental double precision function logpdfy3lnk_gt (y1, y2, par)
| 1~
Warning: Unused dummy argument ‘y1’ at (1) [-Wunused-dummy-argument]
modelfcns_pdfy.f90:59:64:
59 | pure elemental double precision function logpdfy3lnk_gt (y1, y2, par)
| 1~
Warning: Unused dummy argument ‘y2’ at (1) [-Wunused-dummy-argument]
modelfcns_pdfy.f90:49:68:
49 | pure elemental double precision function logpdfyhlnk_gt (y1, y2, par)
| 1~~
Warning: Unused dummy argument ‘par’ at (1) [-Wunused-dummy-argument]
modelfcns_pdfy.f90:49:60:
49 | pure elemental double precision function logpdfyhlnk_gt (y1, y2, par)
| 1~
Warning: Unused dummy argument ‘y1’ at (1) [-Wunused-dummy-argument]
gfortran -fpic -g -O2 -mtune=native -Wall -pedantic -c bfse.f90 -o bfse.o
gfortran -fpic -g -O2 -mtune=native -Wall -pedantic -c covfun.f90 -o covfun.o
covfun.f90:161:25:
161 | end function spcor_dhdk
| ^
Warning: ‘__result_spcor_dhdk’ may be used uninitialized [-Wmaybe-uninitialized]
covfun.f90:146:53:
146 | pure elemental double precision function spcor_dhdk (h,k)
| ^
note: ‘__result_spcor_dhdk’ was declared here
covfun.f90:144:23:
144 | end function spcor_hk
| ^
Warning: ‘__result_spcor_hk’ may be used uninitialized [-Wmaybe-uninitialized]
covfun.f90:129:51:
129 | pure elemental double precision function spcor_hk (h,k)
| ^
note: ‘__result_spcor_hk’ was declared here
covfun.f90:127:23:
127 | end function spcor_hh
| ^
Warning: ‘__result_spcor_hh’ may be used uninitialized [-Wmaybe-uninitialized]
covfun.f90:112:51:
112 | pure elemental double precision function spcor_hh (h,k)
| ^
note: ‘__result_spcor_hh’ was declared here
covfun.f90:110:23:
110 | end function spcor_dk
| ^
Warning: ‘__result_spcor_dk’ may be used uninitialized [-Wmaybe-uninitialized]
covfun.f90:95:51:
95 | pure elemental double precision function spcor_dk (h,k)
| ^
note: ‘__result_spcor_dk’ was declared here
covfun.f90:93:23:
93 | end function spcor_dh
| ^
Warning: ‘__result_spcor_dh’ may be used uninitialized [-Wmaybe-uninitialized]
covfun.f90:78:51:
78 | pure elemental double precision function spcor_dh (h,k)
| ^
note: ‘__result_spcor_dh’ was declared here
covfun.f90:76:20:
76 | end function spcor
| ^
Warning: ‘__result_spcor’ may be used uninitialized [-Wmaybe-uninitialized]
covfun.f90:61:48:
61 | pure elemental double precision function spcor (h,k)
| ^
note: ‘__result_spcor’ was declared here
gfortran -fpic -g -O2 -mtune=native -Wall -pedantic -c linkfcn.f90 -o linkfcn.o
gfortran -fpic -g -O2 -mtune=native -Wall -pedantic -c modelfcns.f90 -o modelfcns.o
modelfcns.f90:72:34:
72 | function logpdfz_hz(n, z, Ups, ldh_Ups, xi, lmxi, ssqdfsc, modeldfh)
| 1~~~~~~
Warning: Unused dummy argument ‘ldh_ups’ at (1) [-Wunused-dummy-argument]
modelfcns.f90:53:34:
53 | function logpdfz_dz(n, z, Ups, ldh_Ups, xi, lmxi, ssqdfsc, modeldfh)
| 1~~~~~~
Warning: Unused dummy argument ‘ldh_ups’ at (1) [-Wunused-dummy-argument]
modelfcns.f90:905:25:
905 | end function invtrwdzhn
| ^
Warning: ‘__result_invtrwdzhn’ may be used uninitialized [-Wmaybe-uninitialized]
modelfcns.f90:889:53:
889 | pure elemental double precision function invtrwdzhn (w,d)
| ^
note: ‘__result_invtrwdzhn’ was declared here
modelfcns.f90:887:25:
887 | end function invtrwhzdn
| ^
Warning: ‘__result_invtrwhzdn’ may be used uninitialized [-Wmaybe-uninitialized]
modelfcns.f90:871:53:
871 | pure elemental double precision function invtrwhzdn (w,d)
| ^
note: ‘__result_invtrwhzdn’ was declared here
modelfcns.f90:869:25:
869 | end function invtrwdzdn
| ^
Warning: ‘__result_invtrwdzdn’ may be used uninitialized [-Wmaybe-uninitialized]
modelfcns.f90:853:53:
853 | pure elemental double precision function invtrwdzdn (w,d)
| ^
note: ‘__result_invtrwdzdn’ was declared here
modelfcns.f90:851:23:
851 | end function invtrwhn
| ^
Warning: ‘__result_invtrwhn’ may be used uninitialized [-Wmaybe-uninitialized]
modelfcns.f90:835:51:
835 | pure elemental double precision function invtrwhn (w,d)
| ^
note: ‘__result_invtrwhn’ was declared here
modelfcns.f90:833:23:
833 | end function invtrwdn
| ^
Warning: ‘__result_invtrwdn’ may be used uninitialized [-Wmaybe-uninitialized]
modelfcns.f90:817:51:
817 | pure elemental double precision function invtrwdn (w,d)
| ^
note: ‘__result_invtrwdn’ was declared here
modelfcns.f90:815:23:
815 | end function invtrw3z
| ^
Warning: ‘__result_invtrw3z’ may be used uninitialized [-Wmaybe-uninitialized]
modelfcns.f90:799:51:
799 | pure elemental double precision function invtrw3z (w,d)
| ^
note: ‘__result_invtrw3z’ was declared here
modelfcns.f90:797:23:
797 | end function invtrwhz
| ^
Warning: ‘__result_invtrwhz’ may be used uninitialized [-Wmaybe-uninitialized]
modelfcns.f90:781:51:
781 | pure elemental double precision function invtrwhz (w,d)
| ^
note: ‘__result_invtrwhz’ was declared here
modelfcns.f90:779:26:
779 | end function loginvtrwdz
| ^
Warning: ‘__result_loginvtrwdz’ may be used uninitialized [-Wmaybe-uninitialized]
modelfcns.f90:763:54:
763 | pure elemental double precision function loginvtrwdz (w,d)
| ^
note: ‘__result_loginvtrwdz’ was declared here
modelfcns.f90:761:23:
761 | end function invtrwdz
| ^
Warning: ‘__result_invtrwdz’ may be used uninitialized [-Wmaybe-uninitialized]
modelfcns.f90:745:51:
745 | pure elemental double precision function invtrwdz (w,d)
| ^
note: ‘__result_invtrwdz’ was declared here
modelfcns.f90:743:21:
743 | end function invtrw
| ^
Warning: ‘__result_invtrw’ may be used uninitialized [-Wmaybe-uninitialized]
modelfcns.f90:727:49:
727 | pure elemental double precision function invtrw (w,d)
| ^
note: ‘__result_invtrw’ was declared here
modelfcns.f90:725:22:
725 | end function transfw
| ^
Warning: ‘__result_transfw’ may be used uninitialized [-Wmaybe-uninitialized]
modelfcns.f90:709:50:
709 | pure elemental double precision function transfw (w,d)
| ^
note: ‘__result_transfw’ was declared here
modelfcns.f90:704:26:
704 | end function invlinkdzhn
| ^
Warning: ‘__result_invlinkdzhn’ may be used uninitialized [-Wmaybe-uninitialized]
modelfcns.f90:676:54:
676 | pure elemental double precision function invlinkdzhn (w, d)
| ^
note: ‘__result_invlinkdzhn’ was declared here
modelfcns.f90:674:26:
674 | end function invlinkhzdn
| ^
Warning: ‘__result_invlinkhzdn’ may be used uninitialized [-Wmaybe-uninitialized]
modelfcns.f90:646:54:
646 | pure elemental double precision function invlinkhzdn (w, d)
| ^
note: ‘__result_invlinkhzdn’ was declared here
modelfcns.f90:644:26:
644 | end function invlinkdzdn
| ^
Warning: ‘__result_invlinkdzdn’ may be used uninitialized [-Wmaybe-uninitialized]
modelfcns.f90:616:54:
616 | pure elemental double precision function invlinkdzdn (w, d)
| ^
note: ‘__result_invlinkdzdn’ was declared here
modelfcns.f90:614:24:
614 | end function invlinkhn
| ^
Warning: ‘__result_invlinkhn’ may be used uninitialized [-Wmaybe-uninitialized]
modelfcns.f90:586:52:
586 | pure elemental double precision function invlinkhn (w, d)
| ^
note: ‘__result_invlinkhn’ was declared here
modelfcns.f90:584:24:
584 | end function invlinkdn
| ^
Warning: ‘__result_invlinkdn’ may be used uninitialized [-Wmaybe-uninitialized]
modelfcns.f90:556:52:
556 | pure elemental double precision function invlinkdn (w, d)
| ^
note: ‘__result_invlinkdn’ was declared here
modelfcns.f90:554:24:
554 | end function invlink3z
| ^
Warning: ‘__result_invlink3z’ may be used uninitialized [-Wmaybe-uninitialized]
modelfcns.f90:526:52:
526 | pure elemental double precision function invlink3z (w, d)
| ^
note: ‘__result_invlink3z’ was declared here
modelfcns.f90:524:24:
524 | end function invlinkhz
| ^
Warning: ‘__result_invlinkhz’ may be used uninitialized [-Wmaybe-uninitialized]
modelfcns.f90:496:52:
496 | pure elemental double precision function invlinkhz (w, d)
| ^
note: ‘__result_invlinkhz’ was declared here
modelfcns.f90:494:27:
494 | end function loginvlinkdz
| ^
Warning: ‘__result_loginvlinkdz’ may be used uninitialized [-Wmaybe-uninitialized]
modelfcns.f90:466:55:
466 | pure elemental double precision function loginvlinkdz (w, d)
| ^
note: ‘__result_loginvlinkdz’ was declared here
modelfcns.f90:464:24:
464 | end function invlinkdz
| ^
Warning: ‘__result_invlinkdz’ may be used uninitialized [-Wmaybe-uninitialized]
modelfcns.f90:436:52:
436 | pure elemental double precision function invlinkdz (w, d)
| ^
note: ‘__result_invlinkdz’ was declared here
modelfcns.f90:434:22:
434 | end function invlink
| ^
Warning: ‘__result_invlink’ may be used uninitialized [-Wmaybe-uninitialized]
modelfcns.f90:406:50:
406 | pure elemental double precision function invlink (w, d)
| ^
note: ‘__result_invlink’ was declared here
modelfcns.f90:404:20:
404 | end function flink
| ^
Warning: ‘__result_flink’ may be used uninitialized [-Wmaybe-uninitialized]
modelfcns.f90:376:48:
376 | pure elemental double precision function flink (w, d)
| ^
note: ‘__result_flink’ was declared here
modelfcns.f90:371:23:
371 | end function fcncumd3
| ^
Warning: ‘__result_fcncumd3’ may be used uninitialized [-Wmaybe-uninitialized]
modelfcns.f90:355:51:
355 | pure elemental double precision function fcncumd3 (x)
| ^
note: ‘__result_fcncumd3’ was declared here
modelfcns.f90:353:23:
353 | end function fcncumd2
| ^
Warning: ‘__result_fcncumd2’ may be used uninitialized [-Wmaybe-uninitialized]
modelfcns.f90:337:51:
337 | pure elemental double precision function fcncumd2 (x)
| ^
note: ‘__result_fcncumd2’ was declared here
modelfcns.f90:335:21:
335 | end function fcncum
| ^
Warning: ‘__result_fcncum’ may be used uninitialized [-Wmaybe-uninitialized]
modelfcns.f90:319:49:
319 | pure elemental double precision function fcncum (x)
| ^
note: ‘__result_fcncum’ was declared here
modelfcns.f90:317:24:
317 | end function invtruemu
| ^
Warning: ‘__result_invtruemu’ may be used uninitialized [-Wmaybe-uninitialized]
modelfcns.f90:301:52:
301 | pure elemental double precision function invtruemu (x)
| ^
note: ‘__result_invtruemu’ was declared here
modelfcns.f90:299:24:
299 | end function fcntruemu
| ^
Warning: ‘__result_fcntruemu’ may be used uninitialized [-Wmaybe-uninitialized]
modelfcns.f90:283:52:
283 | pure elemental double precision function fcntruemu (x)
| ^
note: ‘__result_fcntruemu’ was declared here
modelfcns.f90:281:22:
281 | end function mustart
| ^
Warning: ‘__result_mustart’ may be used uninitialized [-Wmaybe-uninitialized]
modelfcns.f90:265:50:
265 | pure elemental double precision function mustart (y1, y2)
| ^
note: ‘__result_mustart’ was declared here
modelfcns.f90:263:26:
263 | end function logpdfy3lnk
| ^
Warning: ‘__result_logpdfy3lnk’ may be used uninitialized [-Wmaybe-uninitialized]
modelfcns.f90:247:54:
247 | pure elemental double precision function logpdfy3lnk (y1, y2, par)
| ^
note: ‘__result_logpdfy3lnk’ was declared here
modelfcns.f90:245:26:
245 | end function logpdfyhlnk
| ^
Warning: ‘__result_logpdfyhlnk’ may be used uninitialized [-Wmaybe-uninitialized]
modelfcns.f90:229:54:
229 | pure elemental double precision function logpdfyhlnk (y1, y2, par)
| ^
note: ‘__result_logpdfyhlnk’ was declared here
modelfcns.f90:227:26:
227 | end function logpdfydlnk
| ^
Warning: ‘__result_logpdfydlnk’ may be used uninitialized [-Wmaybe-uninitialized]
modelfcns.f90:211:54:
211 | pure elemental double precision function logpdfydlnk (y1, y2, par)
| ^
note: ‘__result_logpdfydlnk’ was declared here
modelfcns.f90:209:22:
209 | end function logdffy
| ^
Warning: ‘__result_logdffy’ may be used uninitialized [-Wmaybe-uninitialized]
modelfcns.f90:193:50:
193 | pure elemental double precision function logdffy (y1, y2, p1, p2)
| ^
note: ‘__result_logdffy’ was declared here
modelfcns.f90:191:22:
191 | end function logpdfy
| ^
Warning: ‘__result_logpdfy’ may be used uninitialized [-Wmaybe-uninitialized]
modelfcns.f90:175:50:
175 | pure elemental double precision function logpdfy (y1, y2, par)
| ^
note: ‘__result_logpdfy’ was declared here
gfortran -fpic -g -O2 -mtune=native -Wall -pedantic -c spcorr.f90 -o spcorr.o
gfortran -fpic -g -O2 -mtune=native -Wall -pedantic -c transformz.f90 -o transformz.o
gfortran -fpic -g -O2 -mtune=native -Wall -pedantic -c seeb.f90 -o seeb.o
seeb.f90:88:51:
88 | double precision function cor_dcov (n, dm, phi, omg, kappa, id) result (DT)
| 1~~
Warning: Unused dummy argument ‘omg’ at (1) [-Wunused-dummy-argument]
seeb.f90:2:21:
2 | sample, Ntot, y, l, F, offset, dm, betm0, betQ0, ssqdf, ssqsc, tsqdf, tsq, &
| 1
Warning: Unused dummy argument ‘l’ at (1) [-Wunused-dummy-argument]
seeb.f90:2:18:
2 | sample, Ntot, y, l, F, offset, dm, betm0, betQ0, ssqdf, ssqsc, tsqdf, tsq, &
| 1
Warning: Unused dummy argument ‘y’ at (1) [-Wunused-dummy-argument]
seeb.f90:290:51:
290 | double precision function cor_hcov (n, dm, phi, omg, kappa, id, jd) result (HT)
| 1~~
Warning: Unused dummy argument ‘omg’ at (1) [-Wunused-dummy-argument]
seeb.f90:250:51:
250 | double precision function cor_dcov (n, dm, phi, omg, kappa, id) result (DT)
| 1~~
Warning: Unused dummy argument ‘omg’ at (1) [-Wunused-dummy-argument]
seeb.f90:130:21:
130 | sample, Ntot, y, l, F, offset, dm, betm0, betQ0, ssqdf, ssqsc, tsqdf, tsq, &
| 1
Warning: Unused dummy argument ‘l’ at (1) [-Wunused-dummy-argument]
seeb.f90:130:18:
130 | sample, Ntot, y, l, F, offset, dm, betm0, betQ0, ssqdf, ssqsc, tsqdf, tsq, &
| 1
Warning: Unused dummy argument ‘y’ at (1) [-Wunused-dummy-argument]
seeb.f90:607:51:
607 | double precision function cor_dcov (n, dm, phi, omg, kappa, id) result (DT)
| 1~~
Warning: Unused dummy argument ‘omg’ at (1) [-Wunused-dummy-argument]
seeb.f90:528:21:
528 | sample, Ntot, y, l, F, offset, dm, betm0, betQ0, ssqdf, ssqsc, tsqdf, tsq, &
| 1
Warning: Unused dummy argument ‘l’ at (1) [-Wunused-dummy-argument]
seeb.f90:528:18:
528 | sample, Ntot, y, l, F, offset, dm, betm0, betQ0, ssqdf, ssqsc, tsqdf, tsq, &
| 1
Warning: Unused dummy argument ‘y’ at (1) [-Wunused-dummy-argument]
gfortran -fpic -g -O2 -mtune=native -Wall -pedantic -c llikderiv.f90 -o llikderiv.o
llikderiv.f90:235:51:
235 | double precision function cor_hcov (n, dm, phi, omg, kappa, id, jd) result (HT)
| 1~~
Warning: Unused dummy argument ‘omg’ at (1) [-Wunused-dummy-argument]
llikderiv.f90:195:51:
195 | double precision function cor_dcov (n, dm, phi, omg, kappa, id) result (DT)
| 1~~
Warning: Unused dummy argument ‘omg’ at (1) [-Wunused-dummy-argument]
gfortran -fpic -g -O2 -mtune=native -Wall -pedantic -c pdfy.f90 -o pdfy.o
gfortran -fpic -g -O2 -mtune=native -Wall -pedantic -c pdfdz.f90 -o pdfdz.o
pdfdz.f90:327:38:
327 | subroutine logcondyzhs_bw (hs, nu, y1, y2, z, n, tsq)
| 1~
Warning: Unused dummy argument ‘y1’ at (1) [-Wunused-dummy-argument]
pdfdz.f90:284:42:
284 | subroutine logcondyzhs_bd (hs, nu, y1, y2, z, n, tsq)
| 1~
Warning: Unused dummy argument ‘y2’ at (1) [-Wunused-dummy-argument]
pdfdz.f90:242:38:
242 | subroutine logcondyzhs_ba (hs, nu, y1, y2, z, n, tsq)
| 1~
Warning: Unused dummy argument ‘y1’ at (1) [-Wunused-dummy-argument]
pdfdz.f90:202:42:
202 | subroutine logcondyzhs_gm (hs, nu, y1, y2, z, n, tsq)
| 1~
Warning: Unused dummy argument ‘y2’ at (1) [-Wunused-dummy-argument]
pdfdz.f90:171:34:
171 | double precision par, pardz, tmp
| 1~~
Warning: Unused variable ‘tmp’ declared at (1) [-Wunused-variable]
pdfdz.f90:162:38:
162 | subroutine logcondyzhs_po (hs, nu, y1, y2, z, n, tsq)
| 1~
Warning: Unused dummy argument ‘y1’ at (1) [-Wunused-dummy-argument]
pdfdz.f90:120:38:
120 | subroutine logcondyzhs_bi (hs, nu, y1, y2, z, n, tsq)
| 1~
Warning: Unused dummy argument ‘y1’ at (1) [-Wunused-dummy-argument]
pdfdz.f90:82:38:
82 | subroutine logcondyzhs_ga (hs, nu, y1, y2, z, n, tsq)
| 1~
Warning: Unused dummy argument ‘y1’ at (1) [-Wunused-dummy-argument]
gfortran -fpic -g -O2 -mtune=native -Wall -pedantic -c mcmcfcns.f90 -o mcmcfcns.o
gfortran -fpic -g -O2 -mtune=native -Wall -pedantic -c calcbd_fcns.f90 -o calcbd_fcns.o
calcbd_fcns.f90:139:51:
139 | double precision function cor_dcov (n, dm, phi, omg, kappa, id) result (DT)
| 1~~
Warning: Unused dummy argument ‘omg’ at (1) [-Wunused-dummy-argument]
calcbd_fcns.f90:86:72:
86 | pure double precision function weigh_llik_deriv_st (dllik, llik, lw, Qcv, n) &
| 1~~
Warning: Unused dummy argument ‘qcv’ at (1) [-Wunused-dummy-argument]
calcbd_fcns.f90:45:59:
45 | pure double precision function weigh_llik_st (llik, lw, Qcv, n) result (out)
| 1~~
Warning: Unused dummy argument ‘qcv’ at (1) [-Wunused-dummy-argument]
calcbd_fcns.f90:23:52:
23 | pure function condymu_sp (n, y1, y2, mu, tsqval, respdfh)
| 1~~~~~~
Warning: Unused dummy argument ‘respdfh’ at (1) [-Wunused-dummy-argument]
calcbd_fcns.f90:84:31:
84 | end function weigh_llik_deriv
| ^
Warning: ‘__result_weigh_llik_deriv’ may be used uninitialized [-Wmaybe-uninitialized]
calcbd_fcns.f90:74:49:
74 | pure double precision function weigh_llik_deriv (icv, dllik, llik, lw, Qcv, n)
| ^
note: ‘__result_weigh_llik_deriv’ was declared here
calcbd_fcns.f90:43:25:
43 | end function weigh_llik
| ^
Warning: ‘__result_weigh_llik’ may be used uninitialized [-Wmaybe-uninitialized]
calcbd_fcns.f90:33:43:
33 | pure double precision function weigh_llik (icv, llik, lw, Qcv, n)
| ^
note: ‘__result_weigh_llik’ was declared here
gfortran -fpic -g -O2 -mtune=native -Wall -pedantic -c bfsp2.f90 -o bfsp2.o
bfsp2.f90:11:43:
11 | kappalist, icf, n, p, kg, ifam, imeth, itr)
| 1~~
Warning: Unused dummy argument ‘itr’ at (1) [-Wunused-dummy-argument]
bfsp2.f90:32:17:
32 | integer i, j, m
| 1
Warning: Unused variable ‘m’ declared at (1) [-Wunused-variable]
bfsp2.f90:33:20:
33 | double precision zsam(n), logNN2(kg)
| 1~~~~~~
Warning: Unused variable ‘zsam’ declared at (1) [-Wunused-variable]
bfsp2.f90:142:43:
142 | kappalist, icf, n, p, kg, ifam, imeth, itr)
| 1~~
Warning: Unused dummy argument ‘itr’ at (1) [-Wunused-dummy-argument]
bfsp2.f90:141:7:
141 | y, l, F, offset, dm, betm0, betQ0, ssqdf, ssqsc, tsqdf, tsq, &
| 1
Warning: Unused dummy argument ‘l’ at (1) [-Wunused-dummy-argument]
bfsp2.f90:141:4:
141 | y, l, F, offset, dm, betm0, betQ0, ssqdf, ssqsc, tsqdf, tsq, &
| 1
Warning: Unused dummy argument ‘y’ at (1) [-Wunused-dummy-argument]
bfsp2.f90:268:43:
268 | kappalist, icf, n, p, kg, ifam, imeth, itr)
| 1~~
Warning: Unused dummy argument ‘itr’ at (1) [-Wunused-dummy-argument]
bfsp2.f90:267:53:
267 | y, l, F, offset, dm, betm0, betQ0, ssqdf, ssqsc, tsqdf, tsq, &
| 1~~~~
Warning: Unused dummy argument ‘tsqdf’ at (1) [-Wunused-dummy-argument]
bfsp2.f90:510:52:
510 | pure function condymu_sp (n, y1, y2, mu, tsqval, respdfh)
| 1~~~~~~
Warning: Unused dummy argument ‘respdfh’ at (1) [-Wunused-dummy-argument]
gfortran -fpic -g -O2 -mtune=native -Wall -pedantic -c calcb2.f90 -o calcb2.o
calcb2.f90:9:50:
9 | ssqsc, tsqdf, tsq, y, l, F, offset, dm, ifam, itr)
| 1~~
Warning: Unused dummy argument ‘itr’ at (1) [-Wunused-dummy-argument]
calcb2.f90:80:50:
80 | ssqsc, tsqdf, tsq, y, l, F, offset, dm, ifam, itr)
| 1~~
Warning: Unused dummy argument ‘itr’ at (1) [-Wunused-dummy-argument]
calcb2.f90:138:50:
138 | ssqsc, tsqdf, tsq, y, l, F, offset, dm, ifam, itr)
| 1~~
Warning: Unused dummy argument ‘itr’ at (1) [-Wunused-dummy-argument]
calcb2.f90:138:26:
138 | ssqsc, tsqdf, tsq, y, l, F, offset, dm, ifam, itr)
| 1
Warning: Unused dummy argument ‘l’ at (1) [-Wunused-dummy-argument]
calcb2.f90:138:23:
138 | ssqsc, tsqdf, tsq, y, l, F, offset, dm, ifam, itr)
| 1
Warning: Unused dummy argument ‘y’ at (1) [-Wunused-dummy-argument]
calcb2.f90:280:52:
280 | pure function condymu_sp (n, y1, y2, mu, tsqval, respdfh)
| 1~~~~~~
Warning: Unused dummy argument ‘respdfh’ at (1) [-Wunused-dummy-argument]
calcb2.f90:310:50:
310 | ssqsc, tsqdf, tsq, y, l, F, offset, dm, ifam, itr)
| 1~~
Warning: Unused dummy argument ‘itr’ at (1) [-Wunused-dummy-argument]
calcb2.f90:390:50:
390 | ssqsc, tsqdf, tsq, y, l, F, offset, dm, ifam, itr)
| 1~~
Warning: Unused dummy argument ‘itr’ at (1) [-Wunused-dummy-argument]
calcb2.f90:457:50:
457 | ssqsc, tsqdf, tsq, y, l, F, offset, dm, ifam, itr)
| 1~~
Warning: Unused dummy argument ‘itr’ at (1) [-Wunused-dummy-argument]
calcb2.f90:457:26:
457 | ssqsc, tsqdf, tsq, y, l, F, offset, dm, ifam, itr)
| 1
Warning: Unused dummy argument ‘l’ at (1) [-Wunused-dummy-argument]
calcb2.f90:457:23:
457 | ssqsc, tsqdf, tsq, y, l, F, offset, dm, ifam, itr)
| 1
Warning: Unused dummy argument ‘y’ at (1) [-Wunused-dummy-argument]
calcb2.f90:622:52:
622 | pure function condymu_sp (n, y1, y2, mu, tsqval, respdfh)
| 1~~~~~~
Warning: Unused dummy argument ‘respdfh’ at (1) [-Wunused-dummy-argument]
gfortran -fpic -g -O2 -mtune=native -Wall -pedantic -c calcbd.f90 -o calcbd.o
calcbd.f90:31:28:
31 | double precision dy, dz, dj, dlglkdnu(Ntot), dlglkdphi(Ntot), &
| 1~
Warning: Unused variable ‘dj’ declared at (1) [-Wunused-variable]
calcbd.f90:30:17:
30 | dmudnu(n), djsam(n), lpdfz, lpdfy
| 1~~~~~~~
Warning: Unused variable ‘djsam’ declared at (1) [-Wunused-variable]
calcbd.f90:31:24:
31 | double precision dy, dz, dj, dlglkdnu(Ntot), dlglkdphi(Ntot), &
| 1~
Warning: Unused variable ‘dz’ declared at (1) [-Wunused-variable]
calcbd.f90:29:66:
29 | double precision zsam(n), msam(n), jsam(n), sam(n), dlogpy(n), dzdnu(n), &
| 1~~~~~~~
Warning: Unused variable ‘dzdnu’ declared at (1) [-Wunused-variable]
calcbd.f90:10:14:
10 | dm, ifam, itr, icv)
| 1~~
Warning: Unused dummy argument ‘itr’ at (1) [-Wunused-dummy-argument]
calcbd.f90:29:38:
29 | double precision zsam(n), msam(n), jsam(n), sam(n), dlogpy(n), dzdnu(n), &
| 1~~~~~~
Warning: Unused variable ‘jsam’ declared at (1) [-Wunused-variable]
calcbd.f90:101:14:
101 | dm, ifam, itr, icv)
| 1~~
Warning: Unused dummy argument ‘itr’ at (1) [-Wunused-dummy-argument]
calcbd.f90:100:53:
100 | n, p, betm0, betQ0, ssqdf, ssqsc, tsqdf, tsq, y, l, F, offset, &
| 1
Warning: Unused dummy argument ‘l’ at (1) [-Wunused-dummy-argument]
calcbd.f90:100:50:
100 | n, p, betm0, betQ0, ssqdf, ssqsc, tsqdf, tsq, y, l, F, offset, &
| 1
Warning: Unused dummy argument ‘y’ at (1) [-Wunused-dummy-argument]
calcbd.f90:125:20:
125 | double precision ymm(n), ymml(n)
| 1~~~~~
Warning: Unused variable ‘ymm’ declared at (1) [-Wunused-variable]
calcbd.f90:125:28:
125 | double precision ymm(n), ymml(n)
| 1~~~~~~
Warning: Unused variable ‘ymml’ declared at (1) [-Wunused-variable]
calcbd.f90:190:14:
190 | dm, ifam, itr, icv)
| 1~~
Warning: Unused dummy argument ‘itr’ at (1) [-Wunused-dummy-argument]
gfortran -fpic -g -O2 -mtune=native -Wall -pedantic -c linkcalc.f90 -o linkcalc.o
gfortran -fpic -g -O2 -mtune=native -Wall -pedantic -c llik.f90 -o llik.o
llik.f90:3:25:
3 | icf, n, p, kg, ifam, itr)
| 1~~
Warning: Unused dummy argument ‘itr’ at (1) [-Wunused-dummy-argument]
llik.f90:61:25:
61 | icf, n, p, kg, ifam, itr)
| 1~~
Warning: Unused dummy argument ‘itr’ at (1) [-Wunused-dummy-argument]
llik.f90:116:25:
116 | icf, n, p, kg, ifam, itr)
| 1~~
Warning: Unused dummy argument ‘itr’ at (1) [-Wunused-dummy-argument]
llik.f90:114:23:
114 | musample, Ntot, y, l, F, offset, &
| 1
Warning: Unused dummy argument ‘l’ at (1) [-Wunused-dummy-argument]
llik.f90:114:20:
114 | musample, Ntot, y, l, F, offset, &
| 1
Warning: Unused dummy argument ‘y’ at (1) [-Wunused-dummy-argument]
llik.f90:160:25:
160 | icf, n, p, kg, ifam, itr)
| 1~~
Warning: Unused dummy argument ‘itr’ at (1) [-Wunused-dummy-argument]
llik.f90:282:52:
282 | pure function condymu_sp (n, y1, y2, mu, tsqval, respdfh)
| 1~~~~~~
Warning: Unused dummy argument ‘respdfh’ at (1) [-Wunused-dummy-argument]
gfortran -fpic -g -O2 -mtune=native -Wall -pedantic -c mcspz0.f90 -o mcspz0.o
gfortran -fpic -g -O2 -mtune=native -Wall -pedantic -c skelpnts.f90 -o skelpnts.o
skelpnts.f90:811:44:
811 | ssqdf, ssqsc, dm, tsq, tsqdf, n, p, np, ssqin, ifam, icf)
| 1~~~~
Warning: Unused dummy argument ‘ssqin’ at (1) [-Wunused-dummy-argument]
skelpnts.f90:645:14:
645 | nu, xi, lmxi, tsq, tsqdf, n)
| 1~~~
Warning: Unused dummy argument ‘lmxi’ at (1) [-Wunused-dummy-argument]
skelpnts.f90:644:29:
644 | function fdz_dnu (z, par, ssq, varh, y1, y2, Ups, &
| 1~~
Warning: Unused dummy argument ‘ssq’ at (1) [-Wunused-dummy-argument]
skelpnts.f90:645:25:
645 | nu, xi, lmxi, tsq, tsqdf, n)
| 1~~~~
Warning: Unused dummy argument ‘tsqdf’ at (1) [-Wunused-dummy-argument]
skelpnts.f90:644:48:
644 | function fdz_dnu (z, par, ssq, varh, y1, y2, Ups, &
| 1~~
Warning: Unused dummy argument ‘ups’ at (1) [-Wunused-dummy-argument]
skelpnts.f90:645:10:
645 | nu, xi, lmxi, tsq, tsqdf, n)
| 1~
Warning: Unused dummy argument ‘xi’ at (1) [-Wunused-dummy-argument]
skelpnts.f90:576:46:
576 | y1, y2, Ups, nu, xi, lmxi, tsq, tsqdf, n, ifam)
| 1~~~
Warning: Unused dummy argument ‘ifam’ at (1) [-Wunused-dummy-argument]
skelpnts.f90:575:58:
575 | subroutine aloglik_dnu (np, logssqg, dnu, meang, prechg, ssqdfh, ssqdfsc, &
| 1~~~~~
Warning: Unused dummy argument ‘ssqdfh’ at (1) [-Wunused-dummy-argument]
skelpnts.f90:575:66:
575 | subroutine aloglik_dnu (np, logssqg, dnu, meang, prechg, ssqdfh, ssqdfsc, &
| 1~~~~~~
Warning: Unused dummy argument ‘ssqdfsc’ at (1) [-Wunused-dummy-argument]
skelpnts.f90:774:6:
774 | nu, xi, lmxi, tsq, tsqdf, n)
| 1~
Warning: Unused dummy argument ‘nu’ at (1) [-Wunused-dummy-argument]
skelpnts.f90:773:25:
773 | function fdz_dcov (z, par, ssq, varh, y1, y2, UpsDTUps, &
| 1~~
Warning: Unused dummy argument ‘par’ at (1) [-Wunused-dummy-argument]
skelpnts.f90:773:30:
773 | function fdz_dcov (z, par, ssq, varh, y1, y2, UpsDTUps, &
| 1~~
Warning: Unused dummy argument ‘ssq’ at (1) [-Wunused-dummy-argument]
skelpnts.f90:774:20:
774 | nu, xi, lmxi, tsq, tsqdf, n)
| 1~~
Warning: Unused dummy argument ‘tsq’ at (1) [-Wunused-dummy-argument]
skelpnts.f90:774:25:
774 | nu, xi, lmxi, tsq, tsqdf, n)
| 1~~~~
Warning: Unused dummy argument ‘tsqdf’ at (1) [-Wunused-dummy-argument]
skelpnts.f90:773:41:
773 | function fdz_dcov (z, par, ssq, varh, y1, y2, UpsDTUps, &
| 1~
Warning: Unused dummy argument ‘y1’ at (1) [-Wunused-dummy-argument]
skelpnts.f90:773:45:
773 | function fdz_dcov (z, par, ssq, varh, y1, y2, UpsDTUps, &
| 1~
Warning: Unused dummy argument ‘y2’ at (1) [-Wunused-dummy-argument]
skelpnts.f90:677:67:
677 | y1, y2, dm, phi, omg, kappa, Ups, nu, xi, lmxi, tsq, tsqdf, n, ifam)
| 1~~~
Warning: Unused dummy argument ‘ifam’ at (1) [-Wunused-dummy-argument]
skelpnts.f90:676:19:
676 | meang, prechg, ssqdfh, ssqdfsc, &
| 1~~~~~
Warning: Unused dummy argument ‘ssqdfh’ at (1) [-Wunused-dummy-argument]
skelpnts.f90:676:27:
676 | meang, prechg, ssqdfh, ssqdfsc, &
| 1~~~~~~
Warning: Unused dummy argument ‘ssqdfsc’ at (1) [-Wunused-dummy-argument]
skelpnts.f90:310:35:
310 | nu, xi, lmxi, tsq, tsqdf, n, icf)
| 1~~
Warning: Unused dummy argument ‘icf’ at (1) [-Wunused-dummy-argument]
skelpnts.f90:310:6:
310 | nu, xi, lmxi, tsq, tsqdf, n, icf)
| 1~
Warning: Unused dummy argument ‘nu’ at (1) [-Wunused-dummy-argument]
skelpnts.f90:309:25:
309 | function fdz_dphi (z, par, ssq, varh, y1, y2, dm, Ups, &
| 1~~
Warning: Unused dummy argument ‘par’ at (1) [-Wunused-dummy-argument]
skelpnts.f90:310:20:
310 | nu, xi, lmxi, tsq, tsqdf, n, icf)
| 1~~
Warning: Unused dummy argument ‘tsq’ at (1) [-Wunused-dummy-argument]
skelpnts.f90:310:25:
310 | nu, xi, lmxi, tsq, tsqdf, n, icf)
| 1~~~~
Warning: Unused dummy argument ‘tsqdf’ at (1) [-Wunused-dummy-argument]
skelpnts.f90:309:41:
309 | function fdz_dphi (z, par, ssq, varh, y1, y2, dm, Ups, &
| 1~
Warning: Unused dummy argument ‘y1’ at (1) [-Wunused-dummy-argument]
skelpnts.f90:309:45:
309 | function fdz_dphi (z, par, ssq, varh, y1, y2, dm, Ups, &
| 1~
Warning: Unused dummy argument ‘y2’ at (1) [-Wunused-dummy-argument]
skelpnts.f90:295:14:
295 | nu, xi, lmxi, tsq, tsqdf, n)
| 1~~~
Warning: Unused dummy argument ‘lmxi’ at (1) [-Wunused-dummy-argument]
skelpnts.f90:294:29:
294 | function fdz_dnu (z, par, ssq, varh, y1, y2, Ups, &
| 1~~
Warning: Unused dummy argument ‘ssq’ at (1) [-Wunused-dummy-argument]
skelpnts.f90:295:25:
295 | nu, xi, lmxi, tsq, tsqdf, n)
| 1~~~~
Warning: Unused dummy argument ‘tsqdf’ at (1) [-Wunused-dummy-argument]
skelpnts.f90:294:48:
294 | function fdz_dnu (z, par, ssq, varh, y1, y2, Ups, &
| 1~~
Warning: Unused dummy argument ‘ups’ at (1) [-Wunused-dummy-argument]
skelpnts.f90:295:10:
295 | nu, xi, lmxi, tsq, tsqdf, n)
| 1~
Warning: Unused dummy argument ‘xi’ at (1) [-Wunused-dummy-argument]
gfortran -fpic -g -O2 -mtune=native -Wall -pedantic -c llikmc.f90 -o llikmc.o
llikmc.f90:81:52:
81 | pure function condymu_sp (n, y1, y2, mu, tsqval, respdfh)
| 1~~~~~~
Warning: Unused dummy argument ‘respdfh’ at (1) [-Wunused-dummy-argument]
llikmc.f90:185:52:
185 | pure function condymu_sp (n, y1, y2, mu, tsqval, respdfh)
| 1~~~~~~
Warning: Unused dummy argument ‘respdfh’ at (1) [-Wunused-dummy-argument]
llikmc.f90:289:52:
289 | pure function condymu_sp (n, y1, y2, mu, tsqval, respdfh)
| 1~~~~~~
Warning: Unused dummy argument ‘respdfh’ at (1) [-Wunused-dummy-argument]
llikmc.f90:387:52:
387 | pure function condymu_sp (n, y1, y2, mu, tsqval, respdfh)
| 1~~~~~~
Warning: Unused dummy argument ‘respdfh’ at (1) [-Wunused-dummy-argument]
gfortran -fpic -g -O2 -mtune=native -Wall -pedantic -c mcsp_mala.f90 -o mcsp_mala.o
gfortran -fpic -g -O2 -mtune=native -Wall -pedantic -c mcsp2.f90 -o mcsp2.o
gcc -shared -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -fpic -L/usr/local/lib64 -o geoBayes.so auxfcns.o msg.o register_dll.o interfaces.o msgmc.o flogsumexp.o lbfgsbmod.o covfun.o betaprior.o pdfy.o tcdfder.o pdfdz.o linkdz.o bmargin.o linkfcn.o modelfcns_link.o modelfcns_pdfy.o modelfcns.o mcmcfcns.o cor_fcns.o calcbd_fcns.o mcsp2.o bfsp2.o calcb2.o calcbd.o linkcalc.o llik.o mcspz0.o skelpnts.o spcorr.o bfse.o transformz.o seeb.o llikderiv.o llikmc.o mcsp_mala.o -llapack -L/data/gannet/ripley/R/R-devel/lib -lRblas -lgfortran -lm -lquadmath -lgfortran -lm -lquadmath
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/geoBayes/src'
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/geoBayes/src'
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/geoBayes/src'
installing to /data/gannet/ripley/R/packages/tests-devel/geoBayes.Rcheck/00LOCK-geoBayes/00new/geoBayes/libs
** R
** data
*** moving datasets to lazyload DB
** demo
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (geoBayes)