Install log for 'freestiler'

* installing *source* package ‘freestiler’ ...
** this is package ‘freestiler’ version ‘0.1.6’
** package ‘freestiler’ successfully unpacked and MD5 sums checked
** using staged installation
Using cargo 1.93.1 (083ac5135 2025-12-15) (Fedora 1.93.1-1.fc42)
Using rustc 1.93.1 (01f6ddf75 2026-02-11) (Fedora 1.93.1-1.fc42)
Building for CRAN.
DuckDB feature disabled.
Writing `src/Makevars`.
`tools/config.R` has finished.
** libs
using C compiler: ‘gcc (GCC) 15.2.1 20260123 (Red Hat 15.2.1-7)’
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/freestiler/src'
gcc -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG   -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes  -c entrypoint.c -o entrypoint.o
if [ -d ./vendor ]; then \
	echo "=== Using offline vendor directory ==="; \
	mkdir -p /data/gannet/ripley/R/packages/tests-devel/freestiler/src/.cargo && \
	cp rust/vendor-config.toml /data/gannet/ripley/R/packages/tests-devel/freestiler/src/.cargo/config.toml; \
elif [ -f ./rust/vendor.tar.xz ]; then \
	echo "=== Using offline vendor tarball ==="; \
	tar xf rust/vendor.tar.xz && \
	mkdir -p /data/gannet/ripley/R/packages/tests-devel/freestiler/src/.cargo && \
	cp rust/vendor-config.toml /data/gannet/ripley/R/packages/tests-devel/freestiler/src/.cargo/config.toml; \
fi
=== Using offline vendor tarball ===
if [ -d ./vendor ]; then \
	find ./vendor -type f \( -name '._*' -o -name '.DS_Store' \) -delete; \
fi
export CARGO_HOME=/data/gannet/ripley/R/packages/tests-devel/freestiler/src/.cargo && \
export PATH="/data/gannet/ripley/bin:/usr/local/bin:/usr/local/texbin:/usr/sbin:.:/data/gannet/ripley/bin:/usr/local/texbin:/usr/local/bin:/usr/sbin:/usr/lib64/qt-3.3/bin:/usr/share/Modules/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin:/usr/lib64/openmpi/bin:/usr/lib64/openmpi/bin:/data/gannet/ripley/.cargo/bin" && \
RUSTFLAGS=" --print=native-static-libs" cargo build -j 2 --offline  --lib --release --manifest-path=./rust/Cargo.toml --target-dir ./rust/target 
warning: a `-j` argument was passed to Cargo but Cargo is also configured with an external jobserver in its environment, ignoring the `-j` parameter
   Compiling proc-macro2 v1.0.106
   Compiling unicode-ident v1.0.24
   Compiling quote v1.0.45
   Compiling libc v0.2.185
   Compiling version_check v0.9.5
   Compiling syn v2.0.117
   Compiling syn v1.0.109
   Compiling libm v0.2.16
   Compiling autocfg v1.5.0
   Compiling serde_core v1.0.228
   Compiling crossbeam-utils v0.8.21
   Compiling num-traits v0.2.19
   Compiling jobserver v0.1.34
   Compiling find-msvc-tools v0.1.9
   Compiling shlex v1.3.0
   Compiling cc v1.2.60
   Compiling pkg-config v0.3.33
   Compiling zstd-sys v2.0.16+zstd.1.5.7
   Compiling crossbeam-epoch v0.9.18
   Compiling hashbrown v0.17.0
   Compiling equivalent v1.0.2
   Compiling rayon-core v1.13.0
   Compiling fnv v1.0.7
   Compiling serde v1.0.228
   Compiling ident_case v1.0.1
   Compiling strsim v0.10.0
   Compiling either v1.15.0
   Compiling darling_core v0.14.4
   Compiling indexmap v2.14.0
   Compiling crossbeam-deque v0.8.6
   Compiling serde_derive v1.0.228
   Compiling proc-macro-error-attr v1.0.4
   Compiling heapless v0.8.0
   Compiling radium v0.7.0
   Compiling winnow v0.5.40
   Compiling byteorder v1.5.0
   Compiling toml_datetime v0.6.11
   Compiling hash32 v0.3.1
   Compiling darling_macro v0.14.4
   Compiling toml_edit v0.19.15
   Compiling proc-macro-error v1.0.4
   Compiling crc32fast v1.5.0
   Compiling anyhow v1.0.102
   Compiling alloc-no-stdlib v2.0.4
   Compiling once_cell v1.21.4
   Compiling smallvec v1.15.1
   Compiling stable_deref_trait v1.2.1
   Compiling tap v1.0.1
   Compiling cfg-if v1.0.4
   Compiling zmij v1.0.21
   Compiling zstd-safe v7.2.4
   Compiling zerocopy v0.8.48
   Compiling wyz v0.5.1
   Compiling i_float v1.6.0
   Compiling proc-macro-crate v1.3.1
   Compiling alloc-stdlib v0.2.2
   Compiling rayon v1.12.0
   Compiling darling v0.14.4
   Compiling ahash v0.8.12
   Compiling funty v2.0.0
   Compiling serde_json v1.0.149
   Compiling simd-adler32 v0.3.9
   Compiling adler2 v2.0.1
   Compiling allocator-api2 v0.2.21
   Compiling extendr-ffi v0.8.1
   Compiling foldhash v0.2.0
   Compiling hashbrown v0.16.1
   Compiling itertools v0.14.0
   Compiling miniz_oxide v0.8.9
   Compiling bitvec v1.0.1
   Compiling deku_derive v0.15.1
   Compiling brotli-decompressor v4.0.3
   Compiling rstar v0.12.2
   Compiling i_shape v1.6.0
   Compiling itertools v0.11.0
   Compiling approx v0.5.1
   Compiling i_tree v0.8.3
   Compiling paste v1.0.15
   Compiling i_key_sort v0.2.0
   Compiling robust v1.2.0
   Compiling heck v0.4.1
   Compiling memchr v2.8.0
   Compiling itoa v1.0.18
   Compiling spade v2.15.1
   Compiling earcutr v0.4.3
   Compiling duplicate v1.0.0
   Compiling i_overlay v1.9.4
   Compiling geo-types v0.7.18
   Compiling deku v0.15.1
   Compiling brotli v7.0.0
   Compiling prost-derive v0.13.5
   Compiling flate2 v1.1.9
   Compiling geographiclib-rs v0.2.7
   Compiling hilbert_2d v1.1.0
   Compiling bytes v1.11.1
   Compiling float_next_after v1.0.0
   Compiling extendr-api v0.8.1
   Compiling integer-encoding v3.0.4
   Compiling log v0.4.29
   Compiling geo v0.29.3
   Compiling prost v0.13.5
   Compiling extendr-macros v0.8.1
   Compiling integer-encoding v4.1.0
   Compiling zstd v0.13.3
   Compiling pmtiles2 v0.3.2
   Compiling freestiler-core v0.1.0 (/data/gannet/ripley/R/packages/tests-devel/freestiler/src/rust/freestiler-core)
warning: unexpected `cfg` condition value: `geoparquet`
 --> freestiler-core/src/lib.rs:6:11
  |
6 | #[cfg(any(feature = "geoparquet", feature = "duckdb"))]
  |           ^^^^^^^^^^^^^^^^^^^^^^
  |
  = note: expected values for `feature` are: `default`
  = help: consider adding `geoparquet` as a feature in `Cargo.toml`
  = note: see <https://doc.rust-lang.org/nightly/rustc/check-cfg/cargo-specifics.html> for more information about checking conditional configuration
  = note: `#[warn(unexpected_cfgs)]` on by default

warning: unexpected `cfg` condition value: `duckdb`
 --> freestiler-core/src/lib.rs:6:35
  |
6 | #[cfg(any(feature = "geoparquet", feature = "duckdb"))]
  |                                   ^^^^^^^^^^^^^^^^^^
  |
  = note: expected values for `feature` are: `default`
  = help: consider adding `duckdb` as a feature in `Cargo.toml`
  = note: see <https://doc.rust-lang.org/nightly/rustc/check-cfg/cargo-specifics.html> for more information about checking conditional configuration

warning: unexpected `cfg` condition value: `duckdb`
  --> freestiler-core/src/lib.rs:12:7
   |
12 | #[cfg(feature = "duckdb")]
   |       ^^^^^^^^^^^^^^^^^^
   |
   = note: expected values for `feature` are: `default`
   = help: consider adding `duckdb` as a feature in `Cargo.toml`
   = note: see <https://doc.rust-lang.org/nightly/rustc/check-cfg/cargo-specifics.html> for more information about checking conditional configuration

warning: unexpected `cfg` condition value: `fastpfor`
    --> freestiler-core/src/mlt.rs:1210:7
     |
1210 | #[cfg(feature = "fastpfor")]
     |       ^^^^^^^^^^^^^^^^^^^^
     |
     = note: expected values for `feature` are: `default`
     = help: consider adding `fastpfor` as a feature in `Cargo.toml`
     = note: see <https://doc.rust-lang.org/nightly/rustc/check-cfg/cargo-specifics.html> for more information about checking conditional configuration

warning: unexpected `cfg` condition value: `fastpfor`
    --> freestiler-core/src/mlt.rs:1229:7
     |
1229 | #[cfg(feature = "fastpfor")]
     |       ^^^^^^^^^^^^^^^^^^^^
     |
     = note: expected values for `feature` are: `default`
     = help: consider adding `fastpfor` as a feature in `Cargo.toml`
     = note: see <https://doc.rust-lang.org/nightly/rustc/check-cfg/cargo-specifics.html> for more information about checking conditional configuration

warning: unexpected `cfg` condition value: `fastpfor`
    --> freestiler-core/src/mlt.rs:1242:11
     |
1242 | #[cfg(not(feature = "fastpfor"))]
     |           ^^^^^^^^^^^^^^^^^^^^
     |
     = note: expected values for `feature` are: `default`
     = help: consider adding `fastpfor` as a feature in `Cargo.toml`
     = note: see <https://doc.rust-lang.org/nightly/rustc/check-cfg/cargo-specifics.html> for more information about checking conditional configuration

warning: unexpected `cfg` condition value: `fsst`
    --> freestiler-core/src/mlt.rs:1250:7
     |
1250 | #[cfg(feature = "fsst")]
     |       ^^^^^^^^^^^^^^^^
     |
     = note: expected values for `feature` are: `default`
     = help: consider adding `fsst` as a feature in `Cargo.toml`
     = note: see <https://doc.rust-lang.org/nightly/rustc/check-cfg/cargo-specifics.html> for more information about checking conditional configuration

warning: unexpected `cfg` condition value: `fsst`
    --> freestiler-core/src/mlt.rs:1260:7
     |
1260 | #[cfg(feature = "fsst")]
     |       ^^^^^^^^^^^^^^^^
     |
     = note: expected values for `feature` are: `default`
     = help: consider adding `fsst` as a feature in `Cargo.toml`
     = note: see <https://doc.rust-lang.org/nightly/rustc/check-cfg/cargo-specifics.html> for more information about checking conditional configuration

warning: unexpected `cfg` condition value: `fastpfor`
    --> freestiler-core/src/mlt.rs:2256:17
     |
2256 | #[cfg(all(test, feature = "fastpfor"))]
     |                 ^^^^^^^^^^^^^^^^^^^^
     |
     = note: expected values for `feature` are: `default`
     = help: consider adding `fastpfor` as a feature in `Cargo.toml`
     = note: see <https://doc.rust-lang.org/nightly/rustc/check-cfg/cargo-specifics.html> for more information about checking conditional configuration

warning: unexpected `cfg` condition value: `fsst`
    --> freestiler-core/src/mlt.rs:2544:17
     |
2544 | #[cfg(all(test, feature = "fsst"))]
     |                 ^^^^^^^^^^^^^^^^
     |
     = note: expected values for `feature` are: `default`
     = help: consider adding `fsst` as a feature in `Cargo.toml`
     = note: see <https://doc.rust-lang.org/nightly/rustc/check-cfg/cargo-specifics.html> for more information about checking conditional configuration

warning: unexpected `cfg` condition value: `fastpfor`
    --> freestiler-core/src/mlt.rs:2703:17
     |
2703 | #[cfg(all(test, feature = "fastpfor", feature = "fsst"))]
     |                 ^^^^^^^^^^^^^^^^^^^^
     |
     = note: expected values for `feature` are: `default`
     = help: consider adding `fastpfor` as a feature in `Cargo.toml`
     = note: see <https://doc.rust-lang.org/nightly/rustc/check-cfg/cargo-specifics.html> for more information about checking conditional configuration

warning: unexpected `cfg` condition value: `fsst`
    --> freestiler-core/src/mlt.rs:2703:39
     |
2703 | #[cfg(all(test, feature = "fastpfor", feature = "fsst"))]
     |                                       ^^^^^^^^^^^^^^^^
     |
     = note: expected values for `feature` are: `default`
     = help: consider adding `fsst` as a feature in `Cargo.toml`
     = note: see <https://doc.rust-lang.org/nightly/rustc/check-cfg/cargo-specifics.html> for more information about checking conditional configuration

warning: unexpected `cfg` condition value: `fsst`
    --> freestiler-core/src/mlt.rs:1050:15
     |
1050 |     #[cfg(not(feature = "fsst"))]
     |               ^^^^^^^^^^^^^^^^
     |
     = note: expected values for `feature` are: `default`
     = help: consider adding `fsst` as a feature in `Cargo.toml`
     = note: see <https://doc.rust-lang.org/nightly/rustc/check-cfg/cargo-specifics.html> for more information about checking conditional configuration

warning: unexpected `cfg` condition value: `fsst`
    --> freestiler-core/src/mlt.rs:1056:11
     |
1056 |     #[cfg(feature = "fsst")]
     |           ^^^^^^^^^^^^^^^^
     |
     = note: expected values for `feature` are: `default`
     = help: consider adding `fsst` as a feature in `Cargo.toml`
     = note: see <https://doc.rust-lang.org/nightly/rustc/check-cfg/cargo-specifics.html> for more information about checking conditional configuration

warning: unexpected `cfg` condition value: `fsst`
    --> freestiler-core/src/mlt.rs:1081:11
     |
1081 |     #[cfg(feature = "fsst")]
     |           ^^^^^^^^^^^^^^^^
     |
     = note: expected values for `feature` are: `default`
     = help: consider adding `fsst` as a feature in `Cargo.toml`
     = note: see <https://doc.rust-lang.org/nightly/rustc/check-cfg/cargo-specifics.html> for more information about checking conditional configuration

warning: `freestiler-core` (lib) generated 15 warnings
   Compiling freestiler v0.1.0 (/data/gannet/ripley/R/packages/tests-devel/freestiler/src/rust)
warning: unexpected `cfg` condition value: `geoparquet`
   --> src/lib.rs:638:15
    |
638 |     #[cfg(not(feature = "geoparquet"))]
    |               ^^^^^^^^^^^^^^^^^^^^^^
    |
    = note: expected values for `feature` are: `default`
    = help: consider adding `geoparquet` as a feature in `Cargo.toml`
    = note: see <https://doc.rust-lang.org/nightly/rustc/check-cfg/cargo-specifics.html> for more information about checking conditional configuration
    = note: `#[warn(unexpected_cfgs)]` on by default

warning: unexpected `cfg` condition value: `geoparquet`
   --> src/lib.rs:659:11
    |
659 |     #[cfg(feature = "geoparquet")]
    |           ^^^^^^^^^^^^^^^^^^^^^^
    |
    = note: expected values for `feature` are: `default`
    = help: consider adding `geoparquet` as a feature in `Cargo.toml`
    = note: see <https://doc.rust-lang.org/nightly/rustc/check-cfg/cargo-specifics.html> for more information about checking conditional configuration

warning: unexpected `cfg` condition value: `duckdb`
   --> src/lib.rs:751:15
    |
751 |     #[cfg(not(feature = "duckdb"))]
    |               ^^^^^^^^^^^^^^^^^^
    |
    = note: expected values for `feature` are: `default`
    = help: consider adding `duckdb` as a feature in `Cargo.toml`
    = note: see <https://doc.rust-lang.org/nightly/rustc/check-cfg/cargo-specifics.html> for more information about checking conditional configuration

warning: unexpected `cfg` condition value: `duckdb`
   --> src/lib.rs:772:11
    |
772 |     #[cfg(feature = "duckdb")]
    |           ^^^^^^^^^^^^^^^^^^
    |
    = note: expected values for `feature` are: `default`
    = help: consider adding `duckdb` as a feature in `Cargo.toml`
    = note: see <https://doc.rust-lang.org/nightly/rustc/check-cfg/cargo-specifics.html> for more information about checking conditional configuration

warning: unexpected `cfg` condition value: `duckdb`
   --> src/lib.rs:868:15
    |
868 |     #[cfg(not(feature = "duckdb"))]
    |               ^^^^^^^^^^^^^^^^^^
    |
    = note: expected values for `feature` are: `default`
    = help: consider adding `duckdb` as a feature in `Cargo.toml`
    = note: see <https://doc.rust-lang.org/nightly/rustc/check-cfg/cargo-specifics.html> for more information about checking conditional configuration

warning: unexpected `cfg` condition value: `duckdb`
   --> src/lib.rs:891:11
    |
891 |     #[cfg(feature = "duckdb")]
    |           ^^^^^^^^^^^^^^^^^^
    |
    = note: expected values for `feature` are: `default`
    = help: consider adding `duckdb` as a feature in `Cargo.toml`
    = note: see <https://doc.rust-lang.org/nightly/rustc/check-cfg/cargo-specifics.html> for more information about checking conditional configuration

note: link against the following native artifacts when linking against this static library. The order and any duplication can be significant on some platforms.

note: native-static-libs: -lR -lgcc_s -lutil -lrt -lpthread -lm -ldl -lc

warning: `freestiler` (lib) generated 6 warnings
    Finished `release` profile [optimized] target(s) in 13m 44s
# Always clean up CARGOTMP
rm -Rf /data/gannet/ripley/R/packages/tests-devel/freestiler/src/.cargo;
gcc -shared -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -fpic -L/usr/local/lib64 -o freestiler.so entrypoint.o -L./rust/target/release -lfreestiler
rm -Rf /data/gannet/ripley/R/packages/tests-devel/freestiler/src/.cargo /data/gannet/ripley/R/packages/tests-devel/freestiler/src/vendor ./rust/target
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/freestiler/src'
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/freestiler/src'
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/freestiler/src'
installing to /data/gannet/ripley/R/packages/tests-devel/freestiler.Rcheck/00LOCK-freestiler/00new/freestiler/libs
** R
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
*** copying figures
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (freestiler)