- using R Under development (unstable) (2025-11-06 r88990)
- using platform: x86_64-pc-linux-gnu
- R was compiled by
gcc (GCC) 15.1.1 20250521 (Red Hat 15.1.1-2)
GNU Fortran (GCC) 15.1.1 20250521 (Red Hat 15.1.1-2)
- running under: Fedora Linux 42 (Workstation Edition)
- using session charset: UTF-8
- using option ‘--no-stop-on-test-error’
- checking for file ‘frailtypack/DESCRIPTION’ ... OK
- this is package ‘frailtypack’ version ‘3.7.1’
- package encoding: UTF-8
- checking package namespace information ... OK
- checking package dependencies ... OK
- checking if this is a source package ... OK
- checking if there is a namespace ... OK
- checking for executable files ... OK
- checking for hidden files and directories ... OK
- checking for portable file names ... OK
- checking for sufficient/correct file permissions ... OK
- checking whether package ‘frailtypack’ can be installed ... [494s/506s] OK
See the install log for details.
- used C compiler: ‘gcc (GCC) 15.1.1 20250521 (Red Hat 15.1.1-2)’
- used Fortran compiler: ‘GNU Fortran (GCC) 15.1.1 20250521 (Red Hat 15.1.1-2)’
- checking package directory ... OK
- checking ‘build’ directory ... OK
- checking DESCRIPTION meta-information ... OK
- checking top-level files ... OK
- checking for left-over files ... OK
- checking index information ... OK
- checking package subdirectories ... OK
- checking code files for non-ASCII characters ... OK
- checking R files for syntax errors ... OK
- checking whether the package can be loaded ... OK
- checking whether the package can be loaded with stated dependencies ... OK
- checking whether the package can be unloaded cleanly ... OK
- checking whether the namespace can be loaded with stated dependencies ... OK
- checking whether the namespace can be unloaded cleanly ... OK
- checking loading without being on the library search path ... OK
- checking use of S3 registration ... OK
- checking dependencies in R code ... OK
- checking S3 generic/method consistency ... OK
- checking replacement functions ... OK
- checking foreign function calls ... OK
- checking R code for possible problems ... [257s/310s] OK
- checking Rd files ... NOTE
checkRd: (-1) GenfrailtyPenal.Rd:338: height/width attributes should be in pixels
checkRd: (-1) GenfrailtyPenal.Rd:348: height/width attributes should be in pixels
checkRd: (-1) GenfrailtyPenal.Rd:375: height/width attributes should be in pixels
checkRd: (-1) GenfrailtyPenal.Rd:383: height/width attributes should be in pixels
checkRd: (-1) GenfrailtyPenal.Rd:390: height/width attributes should be in pixels
checkRd: (-1) GenfrailtyPenal.Rd:417: height/width attributes should be in pixels
checkRd: (-1) GenfrailtyPenal.Rd:458: height/width attributes should be in pixels
checkRd: (-1) GenfrailtyPenal.Rd:496: height/width attributes should be in pixels
checkRd: (-1) GenfrailtyPenal.Rd:507: height/width attributes should be in pixels
checkRd: (-1) additivePenal.Rd:163: height/width attributes should be in pixels
checkRd: (-1) frailtyPenal.Rd:322: height/width attributes should be in pixels
checkRd: (-1) frailtyPenal.Rd:323: height/width attributes should be in pixels
checkRd: (-1) frailtyPenal.Rd:333: height/width attributes should be in pixels
checkRd: (-1) frailtyPenal.Rd:334: height/width attributes should be in pixels
checkRd: (-1) frailtyPenal.Rd:364: height/width attributes should be in pixels
checkRd: (-1) frailtyPenal.Rd:374: height/width attributes should be in pixels
checkRd: (-1) frailtyPenal.Rd:375: height/width attributes should be in pixels
checkRd: (-1) frailtyPenal.Rd:384: height/width attributes should be in pixels
checkRd: (-1) frailtyPenal.Rd:392: height/width attributes should be in pixels
checkRd: (-1) frailtyPenal.Rd:393: height/width attributes should be in pixels
checkRd: (-1) frailtyPenal.Rd:411: height/width attributes should be in pixels
checkRd: (-1) frailtyPenal.Rd:434: height/width attributes should be in pixels
checkRd: (-1) frailtyPenal.Rd:466: height/width attributes should be in pixels
checkRd: (-1) jointSurroCopPenal.Rd:260: height/width attributes should be in pixels
checkRd: (-1) jointSurroCopPenal.Rd:264: height/width attributes should be in pixels
checkRd: (-1) jointSurroCopPenal.Rd:268: height/width attributes should be in pixels
checkRd: (-1) jointSurroCopPenal.Rd:278: height/width attributes should be in pixels
checkRd: (-1) jointSurroCopPenal.Rd:299: height/width attributes should be in pixels
checkRd: (-1) jointSurroCopPenal.Rd:303: height/width attributes should be in pixels
checkRd: (-1) jointSurroCopPenal.Rd:317: height/width attributes should be in pixels
checkRd: (-1) jointSurroCopPenal.Rd:334: height/width attributes should be in pixels
checkRd: (-1) jointSurroCopPenal.Rd:201: height/width attributes should be in pixels
checkRd: (-1) jointSurroPenal.Rd:320: height/width attributes should be in pixels
checkRd: (-1) jointSurroPenal.Rd:331: height/width attributes should be in pixels
checkRd: (-1) jointSurroPenal.Rd:347: height/width attributes should be in pixels
checkRd: (-1) jointSurroPenal.Rd:366: height/width attributes should be in pixels
checkRd: (-1) jointSurroPenal.Rd:386: height/width attributes should be in pixels
checkRd: (-1) jointSurroPenal.Rd:401: height/width attributes should be in pixels
checkRd: (-1) jointSurroPenal.Rd:256: height/width attributes should be in pixels
checkRd: (-1) longiPenal.Rd:313: height/width attributes should be in pixels
checkRd: (-1) multivPenal.Rd:229: height/width attributes should be in pixels
checkRd: (-1) multivPenal.Rd:245: height/width attributes should be in pixels
checkRd: (-1) prediction.Rd:107: height/width attributes should be in pixels
checkRd: (-1) prediction.Rd:116: height/width attributes should be in pixels
checkRd: (-1) prediction.Rd:121: height/width attributes should be in pixels
checkRd: (-1) prediction.Rd:132: height/width attributes should be in pixels
checkRd: (-1) prediction.Rd:137: height/width attributes should be in pixels
checkRd: (-1) prediction.Rd:146: height/width attributes should be in pixels
checkRd: (-1) prediction.Rd:161: height/width attributes should be in pixels
checkRd: (-1) prediction.Rd:192: height/width attributes should be in pixels
checkRd: (-1) prediction.Rd:197: height/width attributes should be in pixels
checkRd: (-1) prediction.Rd:203: height/width attributes should be in pixels
checkRd: (-1) prediction.Rd:215: height/width attributes should be in pixels
checkRd: (-1) prediction.Rd:216: height/width attributes should be in pixels
checkRd: (-1) prediction.Rd:241: height/width attributes should be in pixels
checkRd: (-1) prediction.Rd:249: height/width attributes should be in pixels
checkRd: (-1) prediction.Rd:250: height/width attributes should be in pixels
checkRd: (-1) prediction.Rd:260: height/width attributes should be in pixels
checkRd: (-1) prediction.Rd:277: height/width attributes should be in pixels
checkRd: (-1) ste.Rd:61: height/width attributes should be in pixels
checkRd: (-1) ste.Rd:63: height/width attributes should be in pixels
checkRd: (-1) trivPenal.Rd:290: height/width attributes should be in pixels
checkRd: (-1) trivPenal.Rd:311: height/width attributes should be in pixels
checkRd: (-1) trivPenalNL.Rd:301: height/width attributes should be in pixels
checkRd: (-1) trivPenalNL.Rd:325: height/width attributes should be in pixels
checkRd: (-1) trivPenalNL.Rd:341: height/width attributes should be in pixels
- checking Rd metadata ... OK
- checking Rd line widths ... OK
- checking Rd cross-references ... OK
- checking for missing documentation entries ... OK
- checking for code/documentation mismatches ... OK
- checking Rd \usage sections ... OK
- checking Rd contents ... OK
- checking for unstated dependencies in examples ... OK
- checking contents of ‘data’ directory ... OK
- checking data for non-ASCII characters ... OK
- checking data for ASCII and uncompressed saves ... OK
- checking line endings in C/C++/Fortran sources/headers ... OK
- checking line endings in Makefiles ... OK
- checking compilation flags in Makevars ... OK
- checking for GNU extensions in Makefiles ... OK
- checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
- checking use of PKG_*FLAGS in Makefiles ... OK
- checking use of SHLIB_OPENMP_*FLAGS in Makefiles ... OK
- checking pragmas in C/C++ headers and code ... OK
- checking compilation flags used ... OK
- checking compiled code ... OK
- checking usage of KIND in Fortran files ... OK
- checking installed files from ‘inst/doc’ ... OK
- checking files in ‘vignettes’ ... OK
- checking examples ... [17s/22s] OK
- checking for unstated dependencies in vignettes ... OK
- checking package vignettes ... OK
- checking re-building of vignette outputs ... [16s/19s] OK
- checking PDF version of manual ... [21s/27s] OK
- checking HTML version of manual ... [18s/25s] OK
- checking for non-standard things in the check directory ... OK
- checking for detritus in the temp directory ... OK
- DONE
Status: 1 NOTE