• using R Under development (unstable) (2025-11-13 r89015)
• using platform: x86_64-pc-linux-gnu
• R was compiled by     gcc (GCC) 15.1.1 20250521 (Red Hat 15.1.1-2)     GNU Fortran (GCC) 15.1.1 20250521 (Red Hat 15.1.1-2)
• running under: Fedora Linux 42 (Workstation Edition)
• using session charset: UTF-8
• using option ‘--no-stop-on-test-error’
• checking for file ‘dmlalg/DESCRIPTION’ ... OK
• this is package ‘dmlalg’ version ‘1.0.2’
• package encoding: UTF-8
• checking package namespace information ... OK
• checking package dependencies ... OK
• checking if this is a source package ... OK
• checking if there is a namespace ... OK
• checking for executable files ... OK
• checking for hidden files and directories ... OK
• checking for portable file names ... OK
• checking for sufficient/correct file permissions ... OK
• checking whether package ‘dmlalg’ can be installed ... [18s/49s] OK See the install log for details.
• checking package directory ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking for left-over files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking code files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... OK
• checking whether the package can be loaded with stated dependencies ... OK
• checking whether the package can be unloaded cleanly ... OK
• checking whether the namespace can be loaded with stated dependencies ... OK
• checking whether the namespace can be unloaded cleanly ... [4s/11s] OK
• checking loading without being on the library search path ... OK
• checking use of S3 registration ... OK
• checking dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... [30s/72s] OK
• checking Rd files ... OK
• checking Rd metadata ... OK
• checking Rd line widths ... OK
• checking Rd cross-references ... OK
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking Rd contents ... OK
• checking for unstated dependencies in examples ... OK
• checking examples ... [7s/22s] OK
• checking for unstated dependencies in ‘tests’ ... OK
• checking tests ... [112s/285s] ERROR   Running ‘testthat.R’ [111s/284s] Running the tests in ‘tests/testthat.R’ failed. Complete output:   > library(testthat)   > library(dmlalg)   >   > test_check("dmlalg")   Saving _problems/test-data_formats_regsdml-1332.R   [ FAIL 1 | WARN 0 | SKIP 0 | PASS 1113 ]      ══ Failed tests ════════════════════════════════════════════════════════════════   ── Error ('test-data_formats_regsdml.R:1332:5'): return_results outputs right data formats ──   Error in `expect(nrow(results$beta_test), d)`: `ok` must be `TRUE` or `FALSE`, not the number 3.   Backtrace:       ▆    1. └─dmlalg (local) check_return_results_format(beta = beta, var = var, xx_colnames = xx_colnames) at test-data_formats_regsdml.R:1356:3    2. └─testthat::expect(ok = nrow(results$beta_test)) at test-data_formats_regsdml.R:1332:5    3. └─testthat:::check_bool(ok)    4. └─testthat:::stop_input_type(...)    5. └─rlang::abort(message, ..., call = call, arg = arg)      [ FAIL 1 | WARN 0 | SKIP 0 | PASS 1113 ]   Error:   ! Test failures.   Execution halted
• checking PDF version of manual ... [9s/28s] OK
• checking HTML version of manual ... [6s/17s] OK
• checking for non-standard things in the check directory ... OK
• checking for detritus in the temp directory ... OK
• DONE

Status: 1 ERROR