* installing *source* package ‘data.table’ ...
** package ‘data.table’ successfully unpacked and MD5 sums checked
** using staged installation
gcc-13 13.2.0
zlib 1.2.11 is available ok
R CMD SHLIB supports OpenMP without any extra hint
** libs
using C compiler: ‘gcc-13 (GCC) 13.2.0’
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/data.table/src'
gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I/usr/local/include -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c assign.c -o assign.o
In file included from po.h:2,
from data.table.h:18,
from assign.c:1:
assign.c: In function 'assign':
assign.c:470:15: warning: format '%d' expects argument of type 'int', but argument 2 has type 'R_xlen_t' {aka 'long int'} [-Wformat=]
470 | error(_("Internal error: selfrefnames is ok but tl names [%d] != tl [%d]"), TRUELENGTH(names), oldtncol); // # nocov
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
assign.c:470:13: note: in expansion of macro '_'
470 | error(_("Internal error: selfrefnames is ok but tl names [%d] != tl [%d]"), TRUELENGTH(names), oldtncol); // # nocov
| ^
assign.c:470:66: note: format string is defined here
470 | error(_("Internal error: selfrefnames is ok but tl names [%d] != tl [%d]"), TRUELENGTH(names), oldtncol); // # nocov
| ~^
| |
| int
| %ld
assign.c:650:17: warning: format '%d' expects a matching 'int' argument [-Wformat=]
650 | error(_("Internal error: %d column numbers to delete not now in strictly increasing order. No-dups were checked earlier.")); // # nocov
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
assign.c:650:15: note: in expansion of macro '_'
650 | error(_("Internal error: %d column numbers to delete not now in strictly increasing order. No-dups were checked earlier.")); // # nocov
| ^
assign.c:650:35: note: format string is defined here
650 | error(_("Internal error: %d column numbers to delete not now in strictly increasing order. No-dups were checked earlier.")); // # nocov
| ~^
| |
| int
assign.c: In function 'memrecycle':
assign.c:794:21: warning: format '%d' expects argument of type 'int', but argument 2 has type 'long unsigned int' [-Wformat=]
794 | error(_("Unable to allocate working memory of %d bytes to combine factor levels"), nAdd*sizeof(SEXP *));
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
assign.c:794:19: note: in expansion of macro '_'
794 | error(_("Unable to allocate working memory of %d bytes to combine factor levels"), nAdd*sizeof(SEXP *));
| ^
assign.c:794:60: note: format string is defined here
794 | error(_("Unable to allocate working memory of %d bytes to combine factor levels"), nAdd*sizeof(SEXP *));
| ~^
| |
| int
| %ld
assign.c: In function 'savetl_init':
assign.c:1142:13: warning: format '%p' expects argument of type 'void *', but argument 4 has type 'struct SEXPREC **' [-Wformat=]
1142 | error(_("Internal error: savetl_init checks failed (%d %d %p %p). please report to data.table issue tracker."), nsaved, nalloc, saveds, savedtl); // # nocov
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
assign.c:1142:11: note: in expansion of macro '_'
1142 | error(_("Internal error: savetl_init checks failed (%d %d %p %p). please report to data.table issue tracker."), nsaved, nalloc, saveds, savedtl); // # nocov
| ^
assign.c:1142:64: note: format string is defined here
1142 | error(_("Internal error: savetl_init checks failed (%d %d %p %p). please report to data.table issue tracker."), nsaved, nalloc, saveds, savedtl); // # nocov
| ~^
| |
| void *
assign.c:1142:13: warning: format '%p' expects argument of type 'void *', but argument 5 has type 'R_len_t *' {aka 'int *'} [-Wformat=]
1142 | error(_("Internal error: savetl_init checks failed (%d %d %p %p). please report to data.table issue tracker."), nsaved, nalloc, saveds, savedtl); // # nocov
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
assign.c:1142:11: note: in expansion of macro '_'
1142 | error(_("Internal error: savetl_init checks failed (%d %d %p %p). please report to data.table issue tracker."), nsaved, nalloc, saveds, savedtl); // # nocov
| ^
assign.c:1142:67: note: format string is defined here
1142 | error(_("Internal error: savetl_init checks failed (%d %d %p %p). please report to data.table issue tracker."), nsaved, nalloc, saveds, savedtl); // # nocov
| ~^
| |
| void *
| %ls
gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I/usr/local/include -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c between.c -o between.o
gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I/usr/local/include -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c bmerge.c -o bmerge.o
gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I/usr/local/include -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c chmatch.c -o chmatch.o
gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I/usr/local/include -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c cj.c -o cj.o
gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I/usr/local/include -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c coalesce.c -o coalesce.o
gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I/usr/local/include -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c dogroups.c -o dogroups.o
gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I/usr/local/include -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c fastmean.c -o fastmean.o
gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I/usr/local/include -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c fcast.c -o fcast.o
gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I/usr/local/include -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c fifelse.c -o fifelse.o
gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I/usr/local/include -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c fmelt.c -o fmelt.o
gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I/usr/local/include -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c forder.c -o forder.o
gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I/usr/local/include -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c frank.c -o frank.o
gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I/usr/local/include -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c fread.c -o fread.o
In file included from po.h:2,
from freadR.h:6,
from fread.h:12,
from fread.c:27:
fread.c: In function 'freadMain':
fread.c:1887:32: warning: format '%d' expects argument of type 'int', but argument 4 has type 'int64_t' {aka 'long int'} [-Wformat=]
1887 | if (verbose) DTPRINT(_(" 'header' determined to be true due to column %d containing a string on row 1 and a lower type (%s) in the rest of the %d sample rows\n"),
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
fread.c:1887:30: note: in expansion of macro '_'
1887 | if (verbose) DTPRINT(_(" 'header' determined to be true due to column %d containing a string on row 1 and a lower type (%s) in the rest of the %d sample rows\n"),
| ^
fread.c:1887:154: note: format string is defined here
1887 | if (verbose) DTPRINT(_(" 'header' determined to be true due to column %d containing a string on row 1 and a lower type (%s) in the rest of the %d sample rows\n"),
| ~^
| |
| int
| %ld
gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I/usr/local/include -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c freadR.c -o freadR.o
gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I/usr/local/include -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c froll.c -o froll.o
gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I/usr/local/include -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c frollR.c -o frollR.o
gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I/usr/local/include -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c frolladaptive.c -o frolladaptive.o
gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I/usr/local/include -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c fsort.c -o fsort.o
In file included from po.h:2,
from data.table.h:18,
from fsort.c:1:
fsort.c: In function 'fsort':
fsort.c:168:26: warning: format '%d' expects argument of type 'int', but argument 5 has type 'size_t' {aka 'long unsigned int'} [-Wformat=]
168 | if (verbose) Rprintf(_("maxBit=%d; MSBNbits=%d; shift=%d; MSBsize=%d\n"), maxBit, MSBNbits, shift, MSBsize);
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
fsort.c:168:24: note: in expansion of macro '_'
168 | if (verbose) Rprintf(_("maxBit=%d; MSBNbits=%d; shift=%d; MSBsize=%d\n"), maxBit, MSBNbits, shift, MSBsize);
| ^
fsort.c:168:70: note: format string is defined here
168 | if (verbose) Rprintf(_("maxBit=%d; MSBNbits=%d; shift=%d; MSBsize=%d\n"), maxBit, MSBNbits, shift, MSBsize);
| ~^
| |
| int
| %ld
fsort.c:245:17: warning: format '%d' expects argument of type 'int', but argument 2 has type 'size_t' {aka 'long unsigned int'} [-Wformat=]
245 | Rprintf(_("Reduced MSBsize from %d to "), MSBsize);
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
fsort.c:245:15: note: in expansion of macro '_'
245 | Rprintf(_("Reduced MSBsize from %d to "), MSBsize);
| ^
fsort.c:245:40: note: format string is defined here
245 | Rprintf(_("Reduced MSBsize from %d to "), MSBsize);
| ~^
| |
| int
| %ld
fsort.c:249:17: warning: format '%d' expects argument of type 'int', but argument 2 has type 'size_t' {aka 'long unsigned int'} [-Wformat=]
249 | Rprintf(_("%d by excluding 0 and 1 counts\n"), MSBsize);
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
fsort.c:249:15: note: in expansion of macro '_'
249 | Rprintf(_("%d by excluding 0 and 1 counts\n"), MSBsize);
| ^
fsort.c:249:19: note: format string is defined here
249 | Rprintf(_("%d by excluding 0 and 1 counts\n"), MSBsize);
| ~^
| |
| int
| %ld
gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I/usr/local/include -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c fwrite.c -o fwrite.o
gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I/usr/local/include -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c fwriteR.c -o fwriteR.o
In file included from po.h:2,
from fwrite.h:7,
from fwrite.c:27:
fwrite.c: In function 'fwriteMain':
fwrite.c:625:15: warning: format '%d' expects argument of type 'int', but argument 3 has type 'const void *' [-Wformat=]
625 | DTPRINT(_("\nargs.doRowNames=%d args.rowNames=%d doQuote=%d args.nrow=%"PRId64" args.ncol=%d eolLen=%d\n"),
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
fwrite.c:625:13: note: in expansion of macro '_'
625 | DTPRINT(_("\nargs.doRowNames=%d args.rowNames=%d doQuote=%d args.nrow=%"PRId64" args.ncol=%d eolLen=%d\n"),
| ^
fwrite.c:625:52: note: format string is defined here
625 | DTPRINT(_("\nargs.doRowNames=%d args.rowNames=%d doQuote=%d args.nrow=%"PRId64" args.ncol=%d eolLen=%d\n"),
| ~^
| |
| int
| %p
fwrite.c:711:23: warning: format '%d' expects argument of type 'int', but argument 2 has type 'size_t' {aka 'long unsigned int'} [-Wformat=]
711 | if (!buff) STOP(_("Unable to allocate %d MiB for header: %s"), headerLen / 1024 / 1024, strerror(errno));
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
fwrite.c:711:21: note: in expansion of macro '_'
711 | if (!buff) STOP(_("Unable to allocate %d MiB for header: %s"), headerLen / 1024 / 1024, strerror(errno));
| ^
fwrite.c:711:44: note: format string is defined here
711 | if (!buff) STOP(_("Unable to allocate %d MiB for header: %s"), headerLen / 1024 / 1024, strerror(errno));
| ~^
| |
| int
| %ld
fwrite.c:746:18: warning: format '%d' expects argument of type 'int', but argument 2 has type 'size_t' {aka 'long unsigned int'} [-Wformat=]
746 | STOP(_("Unable to allocate %d MiB for zbuffer: %s"), zbuffSize / 1024 / 1024, strerror(errno)); // # nocov
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
fwrite.c:746:16: note: in expansion of macro '_'
746 | STOP(_("Unable to allocate %d MiB for zbuffer: %s"), zbuffSize / 1024 / 1024, strerror(errno)); // # nocov
| ^
fwrite.c:746:39: note: format string is defined here
746 | STOP(_("Unable to allocate %d MiB for zbuffer: %s"), zbuffSize / 1024 / 1024, strerror(errno)); // # nocov
| ~^
| |
| int
| %ld
fwrite.c:813:12: warning: format '%d' expects argument of type 'int', but argument 2 has type 'long unsigned int' [-Wformat=]
813 | STOP(_("Unable to allocate %d MB * %d thread buffers; '%d: %s'. Please read ?fwrite for nThread, buffMB and verbose options."),
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
fwrite.c:813:10: note: in expansion of macro '_'
813 | STOP(_("Unable to allocate %d MB * %d thread buffers; '%d: %s'. Please read ?fwrite for nThread, buffMB and verbose options."),
| ^
fwrite.c:813:33: note: format string is defined here
813 | STOP(_("Unable to allocate %d MB * %d thread buffers; '%d: %s'. Please read ?fwrite for nThread, buffMB and verbose options."),
| ~^
| |
| int
| %ld
fwrite.c:824:14: warning: format '%d' expects argument of type 'int', but argument 2 has type 'long unsigned int' [-Wformat=]
824 | STOP(_("Unable to allocate %d MB * %d thread compressed buffers; '%d: %s'. Please read ?fwrite for nThread, buffMB and verbose options."),
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
fwrite.c:824:12: note: in expansion of macro '_'
824 | STOP(_("Unable to allocate %d MB * %d thread compressed buffers; '%d: %s'. Please read ?fwrite for nThread, buffMB and verbose options."),
| ^
fwrite.c:824:35: note: format string is defined here
824 | STOP(_("Unable to allocate %d MB * %d thread compressed buffers; '%d: %s'. Please read ?fwrite for nThread, buffMB and verbose options."),
| ~^
| |
| int
| %ld
gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I/usr/local/include -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c gsumm.c -o gsumm.o
In file included from po.h:2,
from data.table.h:18,
from gsumm.c:1:
gsumm.c: In function 'gforce':
gsumm.c:89:13: warning: format '%d' expects argument of type 'int', but argument 6 has type 'size_t' {aka 'long unsigned int'} [-Wformat=]
89 | error(_("Internal error: nrow=%d ngrp=%d nbit=%d bitshift=%d highSize=%d nBatch=%d batchSize=%d lastBatchSize=%d\n"), // # nocov
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
gsumm.c:89:11: note: in expansion of macro '_'
89 | error(_("Internal error: nrow=%d ngrp=%d nbit=%d bitshift=%d highSize=%d nBatch=%d batchSize=%d lastBatchSize=%d\n"), // # nocov
| ^
gsumm.c:89:80: note: format string is defined here
89 | error(_("Internal error: nrow=%d ngrp=%d nbit=%d bitshift=%d highSize=%d nBatch=%d batchSize=%d lastBatchSize=%d\n"), // # nocov
| ~^
| |
| int
| %ld
gsumm.c:89:13: warning: format '%d' expects argument of type 'int', but argument 7 has type 'size_t' {aka 'long unsigned int'} [-Wformat=]
89 | error(_("Internal error: nrow=%d ngrp=%d nbit=%d bitshift=%d highSize=%d nBatch=%d batchSize=%d lastBatchSize=%d\n"), // # nocov
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
gsumm.c:89:11: note: in expansion of macro '_'
89 | error(_("Internal error: nrow=%d ngrp=%d nbit=%d bitshift=%d highSize=%d nBatch=%d batchSize=%d lastBatchSize=%d\n"), // # nocov
| ^
gsumm.c:89:91: note: format string is defined here
89 | error(_("Internal error: nrow=%d ngrp=%d nbit=%d bitshift=%d highSize=%d nBatch=%d batchSize=%d lastBatchSize=%d\n"), // # nocov
| ~^
| |
| int
| %ld
gsumm.c:89:13: warning: format '%d' expects argument of type 'int', but argument 8 has type 'size_t' {aka 'long unsigned int'} [-Wformat=]
89 | error(_("Internal error: nrow=%d ngrp=%d nbit=%d bitshift=%d highSize=%d nBatch=%d batchSize=%d lastBatchSize=%d\n"), // # nocov
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
gsumm.c:89:11: note: in expansion of macro '_'
89 | error(_("Internal error: nrow=%d ngrp=%d nbit=%d bitshift=%d highSize=%d nBatch=%d batchSize=%d lastBatchSize=%d\n"), // # nocov
| ^
gsumm.c:89:105: note: format string is defined here
89 | error(_("Internal error: nrow=%d ngrp=%d nbit=%d bitshift=%d highSize=%d nBatch=%d batchSize=%d lastBatchSize=%d\n"), // # nocov
| ~^
| |
| int
| %ld
gsumm.c:89:13: warning: format '%d' expects argument of type 'int', but argument 9 has type 'size_t' {aka 'long unsigned int'} [-Wformat=]
89 | error(_("Internal error: nrow=%d ngrp=%d nbit=%d bitshift=%d highSize=%d nBatch=%d batchSize=%d lastBatchSize=%d\n"), // # nocov
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
gsumm.c:89:11: note: in expansion of macro '_'
89 | error(_("Internal error: nrow=%d ngrp=%d nbit=%d bitshift=%d highSize=%d nBatch=%d batchSize=%d lastBatchSize=%d\n"), // # nocov
| ^
gsumm.c:89:123: note: format string is defined here
89 | error(_("Internal error: nrow=%d ngrp=%d nbit=%d bitshift=%d highSize=%d nBatch=%d batchSize=%d lastBatchSize=%d\n"), // # nocov
| ~^
| |
| int
| %ld
gsumm.c: In function 'gmean':
gsumm.c:609:19: warning: format '%d' expects argument of type 'int', but argument 3 has type 'long unsigned int' [-Wformat=]
609 | if (!s) error(_("Unable to allocate %d * %d bytes for sum in gmean na.rm=TRUE"), ngrp, sizeof(long double));
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
gsumm.c:609:17: note: in expansion of macro '_'
609 | if (!s) error(_("Unable to allocate %d * %d bytes for sum in gmean na.rm=TRUE"), ngrp, sizeof(long double));
| ^
gsumm.c:609:45: note: format string is defined here
609 | if (!s) error(_("Unable to allocate %d * %d bytes for sum in gmean na.rm=TRUE"), ngrp, sizeof(long double));
| ~^
| |
| int
| %ld
gsumm.c:612:19: warning: format '%d' expects argument of type 'int', but argument 3 has type 'long unsigned int' [-Wformat=]
612 | if (!c) error(_("Unable to allocate %d * %d bytes for counts in gmean na.rm=TRUE"), ngrp, sizeof(int));
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
gsumm.c:612:17: note: in expansion of macro '_'
612 | if (!c) error(_("Unable to allocate %d * %d bytes for counts in gmean na.rm=TRUE"), ngrp, sizeof(int));
| ^
gsumm.c:612:45: note: format string is defined here
612 | if (!c) error(_("Unable to allocate %d * %d bytes for counts in gmean na.rm=TRUE"), ngrp, sizeof(int));
| ~^
| |
| int
| %ld
gsumm.c:638:22: warning: format '%d' expects argument of type 'int', but argument 3 has type 'long unsigned int' [-Wformat=]
638 | if (!si) error(_("Unable to allocate %d * %d bytes for si in gmean na.rm=TRUE"), ngrp, sizeof(long double));
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
gsumm.c:638:20: note: in expansion of macro '_'
638 | if (!si) error(_("Unable to allocate %d * %d bytes for si in gmean na.rm=TRUE"), ngrp, sizeof(long double));
| ^
gsumm.c:638:48: note: format string is defined here
638 | if (!si) error(_("Unable to allocate %d * %d bytes for si in gmean na.rm=TRUE"), ngrp, sizeof(long double));
| ~^
| |
| int
| %ld
gsumm.c: In function 'gprod':
gsumm.c:1411:19: warning: format '%d' expects argument of type 'int', but argument 3 has type 'long unsigned int' [-Wformat=]
1411 | if (!s) error(_("Unable to allocate %d * %d bytes for gprod"), ngrp, sizeof(long double));
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
gsumm.c:1411:17: note: in expansion of macro '_'
1411 | if (!s) error(_("Unable to allocate %d * %d bytes for gprod"), ngrp, sizeof(long double));
| ^
gsumm.c:1411:45: note: format string is defined here
1411 | if (!s) error(_("Unable to allocate %d * %d bytes for gprod"), ngrp, sizeof(long double));
| ~^
| |
| int
| %ld
gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I/usr/local/include -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c ijoin.c -o ijoin.o
In file included from po.h:2,
from data.table.h:18,
from ijoin.c:1:
ijoin.c: In function 'overlaps':
ijoin.c:323:22: warning: too many arguments for format [-Wformat-extra-args]
323 | default: error(_("Internal error: unknown type in mult=ALL in overlaps: %d"), mult, type); // #nocov
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ijoin.c:323:20: note: in expansion of macro '_'
323 | default: error(_("Internal error: unknown type in mult=ALL in overlaps: %d"), mult, type); // #nocov
| ^
gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I/usr/local/include -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c init.c -o init.o
In file included from po.h:2,
from data.table.h:18,
from init.c:1:
init.c: In function 'setSizes':
init.c:153:33: warning: format '%d' expects argument of type 'int', but argument 2 has type 'long unsigned int' [-Wformat=]
153 | if (sizeof(char *)>8) error(_("Pointers are %d bytes, greater than 8. We have not tested on any architecture greater than 64bit yet."), sizeof(char *));
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
init.c:153:31: note: in expansion of macro '_'
153 | if (sizeof(char *)>8) error(_("Pointers are %d bytes, greater than 8. We have not tested on any architecture greater than 64bit yet."), sizeof(char *));
| ^
init.c:153:14: note: format string is defined here
153 | if (sizeof(char *)>8) error(_("Pointers are %d bytes, greater than 8. We have not tested on any architecture greater than 64bit yet."), sizeof(char *));
| ~^
| |
| int
| (ld
init.c: In function 'R_init_data_table':
init.c:168:33: warning: format '%d' expects argument of type 'int', but argument 2 has type 'long unsigned int' [-Wformat=]
168 | if (sizeof(int) != 4) error(_("Checking sizeof(int) [%d] is 4 %s"), sizeof(int), msg);
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
init.c:168:31: note: in expansion of macro '_'
168 | if (sizeof(int) != 4) error(_("Checking sizeof(int) [%d] is 4 %s"), sizeof(int), msg);
| ^
init.c:168:57: note: format string is defined here
168 | if (sizeof(int) != 4) error(_("Checking sizeof(int) [%d] is 4 %s"), sizeof(int), msg);
| ~^
| |
| int
| %ld
init.c:169:36: warning: format '%d' expects argument of type 'int', but argument 2 has type 'long unsigned int' [-Wformat=]
169 | if (sizeof(double) != 8) error(_("Checking sizeof(double) [%d] is 8 %s"), sizeof(double), msg); // 8 on both 32bit and 64bit
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
init.c:169:34: note: in expansion of macro '_'
169 | if (sizeof(double) != 8) error(_("Checking sizeof(double) [%d] is 8 %s"), sizeof(double), msg); // 8 on both 32bit and 64bit
| ^
init.c:169:63: note: format string is defined here
169 | if (sizeof(double) != 8) error(_("Checking sizeof(double) [%d] is 8 %s"), sizeof(double), msg); // 8 on both 32bit and 64bit
| ~^
| |
| int
| %ld
init.c:171:39: warning: format '%d' expects argument of type 'int', but argument 2 has type 'long unsigned int' [-Wformat=]
171 | if (sizeof(long long) != 8) error(_("Checking sizeof(long long) [%d] is 8 %s"), sizeof(long long), msg);
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
init.c:171:37: note: in expansion of macro '_'
171 | if (sizeof(long long) != 8) error(_("Checking sizeof(long long) [%d] is 8 %s"), sizeof(long long), msg);
| ^
init.c:171:69: note: format string is defined here
171 | if (sizeof(long long) != 8) error(_("Checking sizeof(long long) [%d] is 8 %s"), sizeof(long long), msg);
| ~^
| |
| int
| %ld
init.c:172:59: warning: format '%d' expects argument of type 'int', but argument 2 has type 'long unsigned int' [-Wformat=]
172 | if (sizeof(char *) != 4 && sizeof(char *) != 8) error(_("Checking sizeof(pointer) [%d] is 4 or 8 %s"), sizeof(char *), msg);
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
init.c:172:57: note: in expansion of macro '_'
172 | if (sizeof(char *) != 4 && sizeof(char *) != 8) error(_("Checking sizeof(pointer) [%d] is 4 or 8 %s"), sizeof(char *), msg);
| ^
init.c:172:87: note: format string is defined here
172 | if (sizeof(char *) != 4 && sizeof(char *) != 8) error(_("Checking sizeof(pointer) [%d] is 4 or 8 %s"), sizeof(char *), msg);
| ~^
| |
| int
| %ld
init.c:173:47: warning: format '%d' expects argument of type 'int', but argument 2 has type 'long unsigned int' [-Wformat=]
173 | if (sizeof(SEXP) != sizeof(char *)) error(_("Checking sizeof(SEXP) [%d] == sizeof(pointer) [%d] %s"), sizeof(SEXP), sizeof(char *), msg);
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
init.c:173:45: note: in expansion of macro '_'
173 | if (sizeof(SEXP) != sizeof(char *)) error(_("Checking sizeof(SEXP) [%d] == sizeof(pointer) [%d] %s"), sizeof(SEXP), sizeof(char *), msg);
| ^
init.c:173:72: note: format string is defined here
173 | if (sizeof(SEXP) != sizeof(char *)) error(_("Checking sizeof(SEXP) [%d] == sizeof(pointer) [%d] %s"), sizeof(SEXP), sizeof(char *), msg);
| ~^
| |
| int
| %ld
init.c:173:47: warning: format '%d' expects argument of type 'int', but argument 3 has type 'long unsigned int' [-Wformat=]
173 | if (sizeof(SEXP) != sizeof(char *)) error(_("Checking sizeof(SEXP) [%d] == sizeof(pointer) [%d] %s"), sizeof(SEXP), sizeof(char *), msg);
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
init.c:173:45: note: in expansion of macro '_'
173 | if (sizeof(SEXP) != sizeof(char *)) error(_("Checking sizeof(SEXP) [%d] == sizeof(pointer) [%d] %s"), sizeof(SEXP), sizeof(char *), msg);
| ^
init.c:173:96: note: format string is defined here
173 | if (sizeof(SEXP) != sizeof(char *)) error(_("Checking sizeof(SEXP) [%d] == sizeof(pointer) [%d] %s"), sizeof(SEXP), sizeof(char *), msg);
| ~^
| |
| int
| %ld
init.c:174:38: warning: format '%d' expects argument of type 'int', but argument 2 has type 'long unsigned int' [-Wformat=]
174 | if (sizeof(uint64_t) != 8) error(_("Checking sizeof(uint64_t) [%d] is 8 %s"), sizeof(uint64_t), msg);
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
init.c:174:36: note: in expansion of macro '_'
174 | if (sizeof(uint64_t) != 8) error(_("Checking sizeof(uint64_t) [%d] is 8 %s"), sizeof(uint64_t), msg);
| ^
init.c:174:67: note: format string is defined here
174 | if (sizeof(uint64_t) != 8) error(_("Checking sizeof(uint64_t) [%d] is 8 %s"), sizeof(uint64_t), msg);
| ~^
| |
| int
| %ld
init.c:175:37: warning: format '%d' expects argument of type 'int', but argument 2 has type 'long unsigned int' [-Wformat=]
175 | if (sizeof(int64_t) != 8) error(_("Checking sizeof(int64_t) [%d] is 8 %s"), sizeof(int64_t), msg);
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
init.c:175:35: note: in expansion of macro '_'
175 | if (sizeof(int64_t) != 8) error(_("Checking sizeof(int64_t) [%d] is 8 %s"), sizeof(int64_t), msg);
| ^
init.c:175:65: note: format string is defined here
175 | if (sizeof(int64_t) != 8) error(_("Checking sizeof(int64_t) [%d] is 8 %s"), sizeof(int64_t), msg);
| ~^
| |
| int
| %ld
init.c:176:41: warning: format '%d' expects argument of type 'int', but argument 2 has type 'long unsigned int' [-Wformat=]
176 | if (sizeof(signed char) != 1) error(_("Checking sizeof(signed char) [%d] is 1 %s"), sizeof(signed char), msg);
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
init.c:176:39: note: in expansion of macro '_'
176 | if (sizeof(signed char) != 1) error(_("Checking sizeof(signed char) [%d] is 1 %s"), sizeof(signed char), msg);
| ^
init.c:176:73: note: format string is defined here
176 | if (sizeof(signed char) != 1) error(_("Checking sizeof(signed char) [%d] is 1 %s"), sizeof(signed char), msg);
| ~^
| |
| int
| %ld
init.c:177:36: warning: format '%d' expects argument of type 'int', but argument 2 has type 'long unsigned int' [-Wformat=]
177 | if (sizeof(int8_t) != 1) error(_("Checking sizeof(int8_t) [%d] is 1 %s"), sizeof(int8_t), msg);
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
init.c:177:34: note: in expansion of macro '_'
177 | if (sizeof(int8_t) != 1) error(_("Checking sizeof(int8_t) [%d] is 1 %s"), sizeof(int8_t), msg);
| ^
init.c:177:63: note: format string is defined here
177 | if (sizeof(int8_t) != 1) error(_("Checking sizeof(int8_t) [%d] is 1 %s"), sizeof(int8_t), msg);
| ~^
| |
| int
| %ld
init.c:178:37: warning: format '%d' expects argument of type 'int', but argument 2 has type 'long unsigned int' [-Wformat=]
178 | if (sizeof(uint8_t) != 1) error(_("Checking sizeof(uint8_t) [%d] is 1 %s"), sizeof(uint8_t), msg);
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
init.c:178:35: note: in expansion of macro '_'
178 | if (sizeof(uint8_t) != 1) error(_("Checking sizeof(uint8_t) [%d] is 1 %s"), sizeof(uint8_t), msg);
| ^
init.c:178:65: note: format string is defined here
178 | if (sizeof(uint8_t) != 1) error(_("Checking sizeof(uint8_t) [%d] is 1 %s"), sizeof(uint8_t), msg);
| ~^
| |
| int
| %ld
init.c:179:37: warning: format '%d' expects argument of type 'int', but argument 2 has type 'long unsigned int' [-Wformat=]
179 | if (sizeof(int16_t) != 2) error(_("Checking sizeof(int16_t) [%d] is 2 %s"), sizeof(int16_t), msg);
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
init.c:179:35: note: in expansion of macro '_'
179 | if (sizeof(int16_t) != 2) error(_("Checking sizeof(int16_t) [%d] is 2 %s"), sizeof(int16_t), msg);
| ^
init.c:179:65: note: format string is defined here
179 | if (sizeof(int16_t) != 2) error(_("Checking sizeof(int16_t) [%d] is 2 %s"), sizeof(int16_t), msg);
| ~^
| |
| int
| %ld
init.c:180:38: warning: format '%d' expects argument of type 'int', but argument 2 has type 'long unsigned int' [-Wformat=]
180 | if (sizeof(uint16_t) != 2) error(_("Checking sizeof(uint16_t) [%d] is 2 %s"), sizeof(uint16_t), msg);
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
init.c:180:36: note: in expansion of macro '_'
180 | if (sizeof(uint16_t) != 2) error(_("Checking sizeof(uint16_t) [%d] is 2 %s"), sizeof(uint16_t), msg);
| ^
init.c:180:67: note: format string is defined here
180 | if (sizeof(uint16_t) != 2) error(_("Checking sizeof(uint16_t) [%d] is 2 %s"), sizeof(uint16_t), msg);
| ~^
| |
| int
| %ld
init.c:184:35: warning: format '%d' expects argument of type 'int', but argument 2 has type 'R_xlen_t' {aka 'long int'} [-Wformat=]
184 | if (TRUELENGTH(tmp)!=0) error(_("Checking TRUELENGTH(allocVector(INTSXP,2)) [%d] is 0 %s"), TRUELENGTH(tmp), msg);
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
init.c:184:33: note: in expansion of macro '_'
184 | if (TRUELENGTH(tmp)!=0) error(_("Checking TRUELENGTH(allocVector(INTSXP,2)) [%d] is 0 %s"), TRUELENGTH(tmp), msg);
| ^
init.c:184:81: note: format string is defined here
184 | if (TRUELENGTH(tmp)!=0) error(_("Checking TRUELENGTH(allocVector(INTSXP,2)) [%d] is 0 %s"), TRUELENGTH(tmp), msg);
| ~^
| |
| int
| %ld
gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I/usr/local/include -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c inrange.c -o inrange.o
gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I/usr/local/include -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c nafill.c -o nafill.o
gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I/usr/local/include -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c nqrecreateindices.c -o nqrecreateindices.o
gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I/usr/local/include -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c openmp-utils.c -o openmp-utils.o
gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I/usr/local/include -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c quickselect.c -o quickselect.o
gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I/usr/local/include -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c rbindlist.c -o rbindlist.o
gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I/usr/local/include -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c reorder.c -o reorder.o
In file included from po.h:2,
from data.table.h:18,
from reorder.c:1:
reorder.c: In function 'reorder':
reorder.c:17:17: warning: format '%d' expects argument of type 'int', but argument 4 has type 'size_t' {aka 'long unsigned int'} [-Wformat=]
17 | error(_("Item %d of list is type '%s' which isn't yet supported (SIZEOF=%d)"), i+1, type2char(TYPEOF(v)), SIZEOF(v));
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
reorder.c:17:15: note: in expansion of macro '_'
17 | error(_("Item %d of list is type '%s' which isn't yet supported (SIZEOF=%d)"), i+1, type2char(TYPEOF(v)), SIZEOF(v));
| ^
reorder.c:17:82: note: format string is defined here
17 | error(_("Item %d of list is type '%s' which isn't yet supported (SIZEOF=%d)"), i+1, type2char(TYPEOF(v)), SIZEOF(v));
| ~^
| |
| int
| %ld
reorder.c:27:15: warning: format '%d' expects argument of type 'int', but argument 3 has type 'size_t' {aka 'long unsigned int'} [-Wformat=]
27 | error(_("reorder accepts vectors but this non-VECSXP is type '%s' which isn't yet supported (SIZEOF=%d)"), type2char(TYPEOF(x)), SIZEOF(x));
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
reorder.c:27:13: note: in expansion of macro '_'
27 | error(_("reorder accepts vectors but this non-VECSXP is type '%s' which isn't yet supported (SIZEOF=%d)"), type2char(TYPEOF(x)), SIZEOF(x));
| ^
reorder.c:27:108: note: format string is defined here
27 | error(_("reorder accepts vectors but this non-VECSXP is type '%s' which isn't yet supported (SIZEOF=%d)"), type2char(TYPEOF(x)), SIZEOF(x));
| ~^
| |
| int
| %ld
gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I/usr/local/include -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c shift.c -o shift.o
gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I/usr/local/include -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c snprintf.c -o snprintf.o
gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I/usr/local/include -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c subset.c -o subset.o
In file included from po.h:2,
from data.table.h:18,
from snprintf.c:19:
snprintf.c: In function 'test_dt_win_snprintf':
snprintf.c:217:93: warning: format '%s' expects argument of type 'char *', but argument 3 has type 'int' [-Wformat=]
217 | if (res!=13) /* should return what would have been written if not chopped */ error(_("dt_win_snprintf test %d failed: %s"), 10, res);
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
snprintf.c:217:91: note: in expansion of macro '_'
217 | if (res!=13) /* should return what would have been written if not chopped */ error(_("dt_win_snprintf test %d failed: %s"), 10, res);
| ^
snprintf.c:217:127: note: format string is defined here
217 | if (res!=13) /* should return what would have been written if not chopped */ error(_("dt_win_snprintf test %d failed: %s"), 10, res);
| ~^
| |
| char *
| %d
gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I/usr/local/include -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c transpose.c -o transpose.o
gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I/usr/local/include -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c types.c -o types.o
gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I/usr/local/include -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c uniqlist.c -o uniqlist.o
gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I/usr/local/include -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c utils.c -o utils.o
gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I/usr/local/include -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c vecseq.c -o vecseq.o
gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I/usr/local/include -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c wrappers.c -o wrappers.o
gcc-13 -shared -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -fpic -L/usr/local/gcc13/lib64 -L/usr/local/lib64 -o data.table.so assign.o between.o bmerge.o chmatch.o cj.o coalesce.o dogroups.o fastmean.o fcast.o fifelse.o fmelt.o forder.o frank.o fread.o freadR.o froll.o frollR.o frolladaptive.o fsort.o fwrite.o fwriteR.o gsumm.o ijoin.o init.o inrange.o nafill.o nqrecreateindices.o openmp-utils.o quickselect.o rbindlist.o reorder.o shift.o snprintf.o subset.o transpose.o types.o uniqlist.o utils.o vecseq.o wrappers.o -fopenmp -lz
PKG_CFLAGS = -fopenmp
PKG_LIBS = -fopenmp -lz
if [ "data.table.so" != "data_table.so" ]; then mv data.table.so data_table.so; fi
if [ "" != "Windows_NT" ] && [ `uname -s` = 'Darwin' ]; then install_name_tool -id data_table.so data_table.so; fi
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/data.table/src'
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/data.table/src'
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/data.table/src'
installing to /data/gannet/ripley/R/packages/tests-devel/data.table.Rcheck/00LOCK-data.table/00new/data.table/libs
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (data.table)