* installing *source* package ‘cstab’ ...
** this is package ‘cstab’ version ‘0.2-2’
** package ‘cstab’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C++ compiler: ‘g++ (GCC) 15.1.1 20250521 (Red Hat 15.1.1-2)’
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/cstab/src'
g++ -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection   -c RcppExports.cpp -o RcppExports.o
g++ -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection   -c distMat.cpp -o distMat.o
g++ -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection   -c instabCorrection.cpp -o instabCorrection.o
g++ -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection   -c kmeansPredict.cpp -o kmeansPredict.o
instabCorrection.cpp: In function ‘double rootCombLookup(std::vector<double>, std::vector<double>)’:
instabCorrection.cpp:57:16: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<double>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
   57 |   for(i = 0; i < ns.size(); i++) n += ns[i];
      |              ~~^~~~~~~~~~~
instabCorrection.cpp:58:16: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<double>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
   58 |   for(i = 0; i < ns.size(); i++){
      |              ~~^~~~~~~~~~~
instabCorrection.cpp: In function ‘double stabExp(std::vector<double>, std::vector<double>)’:
instabCorrection.cpp:72:16: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<double>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
   72 |   for(i = 0; i < ns.size(); i++) n += ns[i];
      |              ~~^~~~~~~~~~~
instabCorrection.cpp:73:16: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<double>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
   73 |   for(i = 0; i < ns.size(); i++){
      |              ~~^~~~~~~~~~~
instabCorrection.cpp:76:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<double>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
   76 |       for(int j = 0; j < ns.size(); j++) {
      |                      ~~^~~~~~~~~~~
g++ -std=gnu++17 -shared -L/usr/local/lib64 -o cstab.so RcppExports.o distMat.o instabCorrection.o kmeansPredict.o
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/cstab/src'
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/cstab/src'
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/cstab/src'
installing to /data/gannet/ripley/R/packages/tests-devel/cstab.Rcheck/00LOCK-cstab/00new/cstab/libs
** R
** data
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (cstab)