* installing *source* package ‘cstab’ ... ** package ‘cstab’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘g++-14 (GCC) 14.2.0’ make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/cstab/src' g++-14 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c RcppExports.cpp -o RcppExports.o g++-14 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c distMat.cpp -o distMat.o g++-14 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c instabCorrection.cpp -o instabCorrection.o instabCorrection.cpp: In function 'double rootCombLookup(std::vector<double>, std::vector<double>)': instabCorrection.cpp:57:16: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<double>::size_type' {aka 'long unsigned int'} [-Wsign-compare] 57 | for(i = 0; i < ns.size(); i++) n += ns[i]; | ~~^~~~~~~~~~~ instabCorrection.cpp:58:16: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<double>::size_type' {aka 'long unsigned int'} [-Wsign-compare] 58 | for(i = 0; i < ns.size(); i++){ | ~~^~~~~~~~~~~ instabCorrection.cpp: In function 'double stabExp(std::vector<double>, std::vector<double>)': instabCorrection.cpp:72:16: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<double>::size_type' {aka 'long unsigned int'} [-Wsign-compare] 72 | for(i = 0; i < ns.size(); i++) n += ns[i]; | ~~^~~~~~~~~~~ instabCorrection.cpp:73:16: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<double>::size_type' {aka 'long unsigned int'} [-Wsign-compare] 73 | for(i = 0; i < ns.size(); i++){ | ~~^~~~~~~~~~~ instabCorrection.cpp:76:24: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<double>::size_type' {aka 'long unsigned int'} [-Wsign-compare] 76 | for(int j = 0; j < ns.size(); j++) { | ~~^~~~~~~~~~~ g++-14 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c kmeansPredict.cpp -o kmeansPredict.o g++-14 -std=gnu++17 -shared -L/usr/local/gcc14/lib64 -L/usr/local/lib64 -o cstab.so RcppExports.o distMat.o instabCorrection.o kmeansPredict.o make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/cstab/src' make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/cstab/src' make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/cstab/src' installing to /data/gannet/ripley/R/packages/tests-devel/cstab.Rcheck/00LOCK-cstab/00new/cstab/libs ** R ** data ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (cstab)