* installing *source* package ‘conquer’ ...
** package ‘conquer’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C++ compiler: ‘g++-13 (GCC) 13.2.0’
using C++17
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/conquer/src'
g++-13 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/RcppArmadillo/include' -I/usr/local/include   -fopenmp  -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection   -c RcppExports.cpp -o RcppExports.o
g++-13 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/RcppArmadillo/include' -I/usr/local/include   -fopenmp  -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection   -c defFun.cpp -o defFun.o
g++-13 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/RcppArmadillo/include' -I/usr/local/include   -fopenmp  -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection   -c highdGauss.cpp -o highdGauss.o
g++-13 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/RcppArmadillo/include' -I/usr/local/include   -fopenmp  -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection   -c highdLogistic.cpp -o highdLogistic.o
g++-13 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/RcppArmadillo/include' -I/usr/local/include   -fopenmp  -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection   -c highdPara.cpp -o highdPara.o
defFun.cpp: In function 'void lossQr(const arma::mat&, const arma::vec&, const arma::vec&, double, int, arma::vec&, arma::vec&)':
defFun.cpp:33:21: warning: comparison of integer expressions of different signedness: 'int' and 'arma::uword' {aka 'unsigned int'} [-Wsign-compare]
   33 |   for (int k = 0; k < res.size(); k++) {
      |                   ~~^~~~~~~~~~~~
defFun.cpp: In function 'double lossL2(const arma::mat&, const arma::vec&, const arma::vec&, double, double)':
defFun.cpp:51:21: warning: comparison of integer expressions of different signedness: 'int' and 'arma::uword' {aka 'unsigned int'} [-Wsign-compare]
   51 |   for (int i = 0; i < Y.size(); i++) {
      |                   ~~^~~~~~~~~~
defFun.cpp: In function 'double updateL2(const arma::mat&, const arma::vec&, const arma::vec&, arma::vec&, double, double)':
defFun.cpp:62:21: warning: comparison of integer expressions of different signedness: 'int' and 'arma::uword' {aka 'unsigned int'} [-Wsign-compare]
   62 |   for (int i = 0; i < Y.size(); i++) {
      |                   ~~^~~~~~~~~~
g++-13 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/RcppArmadillo/include' -I/usr/local/include   -fopenmp  -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection   -c highdTrian.cpp -o highdTrian.o
g++-13 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/RcppArmadillo/include' -I/usr/local/include   -fopenmp  -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection   -c highdUnif.cpp -o highdUnif.o
g++-13 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/RcppArmadillo/include' -I/usr/local/include   -fopenmp  -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection   -c lowd.cpp -o lowd.o
highdPara.cpp: In function 'double lossParaHd(const arma::mat&, const arma::vec&, const arma::vec&, double, double, double, double)':
highdPara.cpp:11:21: warning: comparison of integer expressions of different signedness: 'int' and 'arma::uword' {aka 'unsigned int'} [-Wsign-compare]
   11 |   for (int i = 0; i < res.size(); i++) {
      |                   ~~^~~~~~~~~~~~
highdPara.cpp: In function 'double updateParaHd(const arma::mat&, const arma::vec&, const arma::vec&, arma::vec&, double, double, double, double, double)':
highdPara.cpp:24:21: warning: comparison of integer expressions of different signedness: 'int' and 'arma::uword' {aka 'unsigned int'} [-Wsign-compare]
   24 |   for (int i = 0; i < res.size(); i++) {
      |                   ~~^~~~~~~~~~~~
highdTrian.cpp: In function 'double lossTrianHd(const arma::mat&, const arma::vec&, const arma::vec&, double, double, double, double)':
highdTrian.cpp:11:21: warning: comparison of integer expressions of different signedness: 'int' and 'arma::uword' {aka 'unsigned int'} [-Wsign-compare]
   11 |   for (int i = 0; i < res.size(); i++) {
      |                   ~~^~~~~~~~~~~~
highdTrian.cpp: In function 'double updateTrianHd(const arma::mat&, const arma::vec&, const arma::vec&, arma::vec&, double, double, double, double, double)':
highdTrian.cpp:24:21: warning: comparison of integer expressions of different signedness: 'int' and 'arma::uword' {aka 'unsigned int'} [-Wsign-compare]
   24 |   for (int i = 0; i < res.size(); i++) {
      |                   ~~^~~~~~~~~~~~
highdUnif.cpp: In function 'double lossUnifHd(const arma::mat&, const arma::vec&, const arma::vec&, double, double, double)':
highdUnif.cpp:11:21: warning: comparison of integer expressions of different signedness: 'int' and 'arma::uword' {aka 'unsigned int'} [-Wsign-compare]
   11 |   for (int i = 0; i < res.size(); i++) {
      |                   ~~^~~~~~~~~~~~
highdUnif.cpp: In function 'double updateUnifHd(const arma::mat&, const arma::vec&, const arma::vec&, arma::vec&, double, double, double, double)':
highdUnif.cpp:24:21: warning: comparison of integer expressions of different signedness: 'int' and 'arma::uword' {aka 'unsigned int'} [-Wsign-compare]
   24 |   for (int i = 0; i < res.size(); i++) {
      |                   ~~^~~~~~~~~~~~
g++-13 -std=gnu++17 -shared -L/usr/local/gcc13/lib64 -L/usr/local/lib64 -L/usr/local/clang18/lib/x86_64-unknown-linux-gnu -o conquer.so RcppExports.o defFun.o highdGauss.o highdLogistic.o highdPara.o highdTrian.o highdUnif.o lowd.o -fopenmp -llapack -L/data/gannet/ripley/R/R-devel/lib -lRblas -lgfortran -lm -lquadmath
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/conquer/src'
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/conquer/src'
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/conquer/src'
installing to /data/gannet/ripley/R/packages/tests-devel/conquer.Rcheck/00LOCK-conquer/00new/conquer/libs
** R
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (conquer)