* installing *source* package ‘coneproj’ ...
** package ‘coneproj’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C compiler: ‘gcc-13 (GCC) 13.2.0’
using C++ compiler: ‘g++-13 (GCC) 13.2.0’
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/coneproj/src'
g++-13 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-dev/RcppArmadillo/include' -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection   -c coneproj.cpp -o coneproj.o
gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-dev/RcppArmadillo/include' -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes  -c registerDynamicSymbol.c -o registerDynamicSymbol.o
coneproj.cpp: In function 'SEXPREC* coneACpp(SEXP, SEXP, SEXP)':
coneproj.cpp:76:26: warning: comparison of integer expressions of different signedness: 'int' and 'const arma::uword' {aka 'const unsigned int'} [-Wsign-compare]
   76 |         for(int k = 0; k < indice.n_elem; k ++){
      |                        ~~^~~~~~~~~~~~~~~
coneproj.cpp: In function 'SEXPREC* coneBCpp(SEXP, SEXP, SEXP, SEXP)':
coneproj.cpp:225:26: warning: comparison of integer expressions of different signedness: 'int' and 'const arma::uword' {aka 'const unsigned int'} [-Wsign-compare]
  225 |         for(int k = 0; k < indice.n_elem; k ++){
      |                        ~~^~~~~~~~~~~~~~~
coneproj.cpp:231:21: warning: comparison of integer expressions of different signedness: 'const arma::uword' {aka 'const unsigned int'} and 'int' [-Wsign-compare]
  231 |        if (a.n_elem > p) {
      |            ~~~~~~~~~^~~
coneproj.cpp:234:30: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare]
  234 |             for(int i = p; i <= a.n_elem - 1; i ++){
      |                            ~~^~~~~~~~~~~~~~~
coneproj.cpp:275:30: warning: comparison of integer expressions of different signedness: 'int' and 'const arma::uword' {aka 'const unsigned int'} [-Wsign-compare]
  275 |             for(int k = 0; k < indiceEnd.n_elem; k ++){
      |                            ~~^~~~~~~~~~~~~~~~~~
coneproj.cpp: In function 'SEXPREC* qprogCpp(SEXP, SEXP, SEXP, SEXP, SEXP)':
coneproj.cpp:379:26: warning: comparison of integer expressions of different signedness: 'int' and 'const arma::uword' {aka 'const unsigned int'} [-Wsign-compare]
  379 |         for(int k = 0; k < indice.n_elem; k ++){
      |                        ~~^~~~~~~~~~~~~~~
g++-13 -std=gnu++17 -shared -L/usr/local/gcc13/lib64 -L/usr/local/lib64 -L/usr/local/clang18/lib/x86_64-unknown-linux-gnu -o coneproj.so coneproj.o registerDynamicSymbol.o -llapack -L/data/gannet/ripley/R/R-devel/lib -lRblas -lgfortran -lm -lquadmath
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/coneproj/src'
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/coneproj/src'
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/coneproj/src'
installing to /data/gannet/ripley/R/packages/tests-devel/coneproj.Rcheck/00LOCK-coneproj/00new/coneproj/libs
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (coneproj)