* installing *source* package ‘cobs’ ...
** package ‘cobs’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C compiler: ‘gcc-13 (GCC) 13.2.0’
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/cobs/src'
gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c SR.c -o SR.o
In file included from SR.h:1,
from SR.c:5:
nrutil.h:44:23: warning: 'intminarg2' defined but not used [-Wunused-variable]
44 | static int intminarg1,intminarg2;
| ^~~~~~~~~~
nrutil.h:44:12: warning: 'intminarg1' defined but not used [-Wunused-variable]
44 | static int intminarg1,intminarg2;
| ^~~~~~~~~~
nrutil.h:40:21: warning: 'iminarg2' defined but not used [-Wunused-variable]
40 | static int iminarg1,iminarg2;
| ^~~~~~~~
nrutil.h:40:12: warning: 'iminarg1' defined but not used [-Wunused-variable]
40 | static int iminarg1,iminarg2;
| ^~~~~~~~
nrutil.h:36:21: warning: 'imaxarg2' defined but not used [-Wunused-variable]
36 | static int imaxarg1,imaxarg2;
| ^~~~~~~~
nrutil.h:36:12: warning: 'imaxarg1' defined but not used [-Wunused-variable]
36 | static int imaxarg1,imaxarg2;
| ^~~~~~~~
nrutil.h:32:22: warning: 'lminarg2' defined but not used [-Wunused-variable]
32 | static long lminarg1,lminarg2;
| ^~~~~~~~
nrutil.h:32:13: warning: 'lminarg1' defined but not used [-Wunused-variable]
32 | static long lminarg1,lminarg2;
| ^~~~~~~~
nrutil.h:28:22: warning: 'lmaxarg2' defined but not used [-Wunused-variable]
28 | static long lmaxarg1,lmaxarg2;
| ^~~~~~~~
nrutil.h:28:13: warning: 'lmaxarg1' defined but not used [-Wunused-variable]
28 | static long lmaxarg1,lmaxarg2;
| ^~~~~~~~
nrutil.h:24:23: warning: 'minarg2' defined but not used [-Wunused-variable]
24 | static double minarg1,minarg2;
| ^~~~~~~
nrutil.h:24:15: warning: 'minarg1' defined but not used [-Wunused-variable]
24 | static double minarg1,minarg2;
| ^~~~~~~
nrutil.h:20:23: warning: 'maxarg2' defined but not used [-Wunused-variable]
20 | static double maxarg1,maxarg2;
| ^~~~~~~
nrutil.h:20:15: warning: 'maxarg1' defined but not used [-Wunused-variable]
20 | static double maxarg1,maxarg2;
| ^~~~~~~
nrutil.h:16:24: warning: 'dminarg2' defined but not used [-Wunused-variable]
16 | static double dminarg1,dminarg2;
| ^~~~~~~~
nrutil.h:16:15: warning: 'dminarg1' defined but not used [-Wunused-variable]
16 | static double dminarg1,dminarg2;
| ^~~~~~~~
nrutil.h:12:24: warning: 'dmaxarg2' defined but not used [-Wunused-variable]
12 | static double dmaxarg1,dmaxarg2;
| ^~~~~~~~
nrutil.h:12:15: warning: 'dmaxarg1' defined but not used [-Wunused-variable]
12 | static double dmaxarg1,dmaxarg2;
| ^~~~~~~~
nrutil.h:9:15: warning: 'dsqrarg' defined but not used [-Wunused-variable]
9 | static double dsqrarg;
| ^~~~~~~
gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c init.c -o init.o
In file included from SR.h:1,
from init.c:9:
nrutil.h:44:23: warning: 'intminarg2' defined but not used [-Wunused-variable]
44 | static int intminarg1,intminarg2;
| ^~~~~~~~~~
nrutil.h:44:12: warning: 'intminarg1' defined but not used [-Wunused-variable]
44 | static int intminarg1,intminarg2;
| ^~~~~~~~~~
nrutil.h:40:21: warning: 'iminarg2' defined but not used [-Wunused-variable]
40 | static int iminarg1,iminarg2;
| ^~~~~~~~
nrutil.h:40:12: warning: 'iminarg1' defined but not used [-Wunused-variable]
40 | static int iminarg1,iminarg2;
| ^~~~~~~~
nrutil.h:36:21: warning: 'imaxarg2' defined but not used [-Wunused-variable]
36 | static int imaxarg1,imaxarg2;
| ^~~~~~~~
nrutil.h:36:12: warning: 'imaxarg1' defined but not used [-Wunused-variable]
36 | static int imaxarg1,imaxarg2;
| ^~~~~~~~
nrutil.h:32:22: warning: 'lminarg2' defined but not used [-Wunused-variable]
32 | static long lminarg1,lminarg2;
| ^~~~~~~~
nrutil.h:32:13: warning: 'lminarg1' defined but not used [-Wunused-variable]
32 | static long lminarg1,lminarg2;
| ^~~~~~~~
nrutil.h:28:22: warning: 'lmaxarg2' defined but not used [-Wunused-variable]
28 | static long lmaxarg1,lmaxarg2;
| ^~~~~~~~
nrutil.h:28:13: warning: 'lmaxarg1' defined but not used [-Wunused-variable]
28 | static long lmaxarg1,lmaxarg2;
| ^~~~~~~~
nrutil.h:24:23: warning: 'minarg2' defined but not used [-Wunused-variable]
24 | static double minarg1,minarg2;
| ^~~~~~~
nrutil.h:24:15: warning: 'minarg1' defined but not used [-Wunused-variable]
24 | static double minarg1,minarg2;
| ^~~~~~~
nrutil.h:20:23: warning: 'maxarg2' defined but not used [-Wunused-variable]
20 | static double maxarg1,maxarg2;
| ^~~~~~~
nrutil.h:20:15: warning: 'maxarg1' defined but not used [-Wunused-variable]
20 | static double maxarg1,maxarg2;
| ^~~~~~~
nrutil.h:16:24: warning: 'dminarg2' defined but not used [-Wunused-variable]
16 | static double dminarg1,dminarg2;
| ^~~~~~~~
nrutil.h:16:15: warning: 'dminarg1' defined but not used [-Wunused-variable]
16 | static double dminarg1,dminarg2;
| ^~~~~~~~
nrutil.h:12:24: warning: 'dmaxarg2' defined but not used [-Wunused-variable]
12 | static double dmaxarg1,dmaxarg2;
| ^~~~~~~~
nrutil.h:12:15: warning: 'dmaxarg1' defined but not used [-Wunused-variable]
12 | static double dmaxarg1,dmaxarg2;
| ^~~~~~~~
nrutil.h:9:15: warning: 'dsqrarg' defined but not used [-Wunused-variable]
9 | static double dsqrarg;
| ^~~~~~~
nrutil.h:6:15: warning: 'sqrarg' defined but not used [-Wunused-variable]
6 | static double sqrarg;
| ^~~~~~
gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c nrutil.c -o nrutil.o
In file included from nrutil.c:6:
nrutil.h:44:23: warning: 'intminarg2' defined but not used [-Wunused-variable]
44 | static int intminarg1,intminarg2;
| ^~~~~~~~~~
nrutil.h:44:12: warning: 'intminarg1' defined but not used [-Wunused-variable]
44 | static int intminarg1,intminarg2;
| ^~~~~~~~~~
nrutil.h:40:21: warning: 'iminarg2' defined but not used [-Wunused-variable]
40 | static int iminarg1,iminarg2;
| ^~~~~~~~
nrutil.h:40:12: warning: 'iminarg1' defined but not used [-Wunused-variable]
40 | static int iminarg1,iminarg2;
| ^~~~~~~~
nrutil.h:36:21: warning: 'imaxarg2' defined but not used [-Wunused-variable]
36 | static int imaxarg1,imaxarg2;
| ^~~~~~~~
nrutil.h:36:12: warning: 'imaxarg1' defined but not used [-Wunused-variable]
36 | static int imaxarg1,imaxarg2;
| ^~~~~~~~
nrutil.h:32:22: warning: 'lminarg2' defined but not used [-Wunused-variable]
32 | static long lminarg1,lminarg2;
| ^~~~~~~~
nrutil.h:32:13: warning: 'lminarg1' defined but not used [-Wunused-variable]
32 | static long lminarg1,lminarg2;
| ^~~~~~~~
nrutil.h:28:22: warning: 'lmaxarg2' defined but not used [-Wunused-variable]
28 | static long lmaxarg1,lmaxarg2;
| ^~~~~~~~
nrutil.h:28:13: warning: 'lmaxarg1' defined but not used [-Wunused-variable]
28 | static long lmaxarg1,lmaxarg2;
| ^~~~~~~~
nrutil.h:24:23: warning: 'minarg2' defined but not used [-Wunused-variable]
24 | static double minarg1,minarg2;
| ^~~~~~~
nrutil.h:24:15: warning: 'minarg1' defined but not used [-Wunused-variable]
24 | static double minarg1,minarg2;
| ^~~~~~~
nrutil.h:20:23: warning: 'maxarg2' defined but not used [-Wunused-variable]
20 | static double maxarg1,maxarg2;
| ^~~~~~~
nrutil.h:20:15: warning: 'maxarg1' defined but not used [-Wunused-variable]
20 | static double maxarg1,maxarg2;
| ^~~~~~~
nrutil.h:16:24: warning: 'dminarg2' defined but not used [-Wunused-variable]
16 | static double dminarg1,dminarg2;
| ^~~~~~~~
nrutil.h:16:15: warning: 'dminarg1' defined but not used [-Wunused-variable]
16 | static double dminarg1,dminarg2;
| ^~~~~~~~
nrutil.h:12:24: warning: 'dmaxarg2' defined but not used [-Wunused-variable]
12 | static double dmaxarg1,dmaxarg2;
| ^~~~~~~~
nrutil.h:12:15: warning: 'dmaxarg1' defined but not used [-Wunused-variable]
12 | static double dmaxarg1,dmaxarg2;
| ^~~~~~~~
nrutil.h:9:15: warning: 'dsqrarg' defined but not used [-Wunused-variable]
9 | static double dsqrarg;
| ^~~~~~~
nrutil.h:6:15: warning: 'sqrarg' defined but not used [-Wunused-variable]
6 | static double sqrarg;
| ^~~~~~
gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c splines.c -o splines.o
gcc-13 -shared -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -fpic -L/usr/local/gcc13/lib64 -L/usr/local/lib64 -L/usr/local/clang18/lib/x86_64-unknown-linux-gnu -o cobs.so SR.o init.o nrutil.o splines.o -L/data/gannet/ripley/R/R-devel/lib -lRblas -lgfortran -lm -lquadmath
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/cobs/src'
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/cobs/src'
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/cobs/src'
installing to /data/gannet/ripley/R/packages/tests-devel/cobs.Rcheck/00LOCK-cobs/00new/cobs/libs
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (cobs)