* installing *source* package ‘cmtkr’ ...
** this is package ‘cmtkr’ version ‘0.2.3’
** package ‘cmtkr’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C++ compiler: ‘g++ (GCC) 15.2.1 20260123 (Red Hat 15.2.1-7)’
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/cmtkr/src'
g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I. -Icmtk -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c RcppExports.cpp -o RcppExports.o
g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I. -Icmtk -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c streamxform.cpp -o streamxform.o
g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I. -Icmtk -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c cmtk_stubs.cpp -o cmtk_stubs.o
g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I. -Icmtk -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c cmtk/Base/cmtkXform.cxx -o cmtk/Base/cmtkXform.o
g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I. -Icmtk -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c cmtk/Base/cmtkXform_Inverse.cxx -o cmtk/Base/cmtkXform_Inverse.o
g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I. -Icmtk -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c cmtk/Base/cmtkXformList.cxx -o cmtk/Base/cmtkXformList.o
g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I. -Icmtk -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c cmtk/Base/cmtkXformListEntry.cxx -o cmtk/Base/cmtkXformListEntry.o
g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I. -Icmtk -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c cmtk/Base/cmtkAffineXform.cxx -o cmtk/Base/cmtkAffineXform.o
g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I. -Icmtk -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c cmtk/Base/cmtkWarpXform.cxx -o cmtk/Base/cmtkWarpXform.o
g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I. -Icmtk -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c cmtk/Base/cmtkSplineWarpXform.cxx -o cmtk/Base/cmtkSplineWarpXform.o
g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I. -Icmtk -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c cmtk/Base/cmtkSplineWarpXform_Inverse.cxx -o cmtk/Base/cmtkSplineWarpXform_Inverse.o
g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I. -Icmtk -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c cmtk/Base/cmtkSplineWarpXform_Jacobian.cxx -o cmtk/Base/cmtkSplineWarpXform_Jacobian.o
g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I. -Icmtk -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c cmtk/Base/cmtkSplineWarpXform_Rigidity.cxx -o cmtk/Base/cmtkSplineWarpXform_Rigidity.o
g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I. -Icmtk -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c cmtk/Base/cmtkPolynomialXform.cxx -o cmtk/Base/cmtkPolynomialXform.o
g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I. -Icmtk -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c cmtk/Base/cmtkTypes.cxx -o cmtk/Base/cmtkTypes.o
g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I. -Icmtk -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c cmtk/Base/cmtkMatrix3x3.cxx -o cmtk/Base/cmtkMatrix3x3.o
g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I. -Icmtk -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c cmtk/Base/cmtkMatrix4x4.cxx -o cmtk/Base/cmtkMatrix4x4.o
g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I. -Icmtk -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c cmtk/Base/cmtkCompatibilityMatrix4x4.cxx -o cmtk/Base/cmtkCompatibilityMatrix4x4.o
g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I. -Icmtk -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c cmtk/Base/cmtkVector.cxx -o cmtk/Base/cmtkVector.o
g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I. -Icmtk -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c cmtk/Base/cmtkBitVector.cxx -o cmtk/Base/cmtkBitVector.o
g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I. -Icmtk -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c cmtk/Base/cmtkMetaInformationObject.cxx -o cmtk/Base/cmtkMetaInformationObject.o
g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I. -Icmtk -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c cmtk/Base/cmtkAnatomicalOrientation.cxx -o cmtk/Base/cmtkAnatomicalOrientation.o
g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I. -Icmtk -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c cmtk/Base/cmtkAnatomicalOrientationBase.cxx -o cmtk/Base/cmtkAnatomicalOrientationBase.o
g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I. -Icmtk -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c cmtk/Base/cmtkAnatomicalOrientationPermutationMatrix.cxx -o cmtk/Base/cmtkAnatomicalOrientationPermutationMatrix.o
g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I. -Icmtk -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c cmtk/Base/cmtkDataGrid.cxx -o cmtk/Base/cmtkDataGrid.o
g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I. -Icmtk -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c cmtk/Base/cmtkDataGrid_Crop.cxx -o cmtk/Base/cmtkDataGrid_Crop.o
In file included from cmtk/Base/cmtkAffineXform.h:39,
from cmtk/Base/cmtkAffineXform.cxx:33:
cmtk/Base/cmtkVector.h:274: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
274 | #pragma omp parallel for if (Dim>1e4) reduction(+:Result)
cmtk/Base/cmtkVector.h:319: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
319 | #pragma omp parallel for if (Dim>1e5)
cmtk/Base/cmtkVector.h:343: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
343 | #pragma omp parallel for if (Dim>1e4)
cmtk/Base/cmtkVector.h:357: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
357 | #pragma omp parallel for if (Dim>1e4)
cmtk/Base/cmtkVector.h:369: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
369 | #pragma omp parallel for if (Dim>1e4)
In file included from cmtk/Base/cmtkVector.h:438:
cmtk/Base/cmtkVector.txx:51: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
51 | #pragma omp parallel for if (p.Dim>1e4)
cmtk/Base/cmtkVector.txx:70: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
70 | #pragma omp parallel for if (p.Dim>1e4)
cmtk/Base/cmtkVector.txx:87: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
87 | #pragma omp parallel for if (p.Dim>1e4)
cmtk/Base/cmtkVector.txx:104: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
104 | #pragma omp parallel for if (p.Dim>1e4)
cmtk/Base/cmtkVector.txx:122: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
122 | #pragma omp parallel for if (p.Dim>1e4)
In file included from cmtk/Base/cmtkXform.h:40,
from cmtk/Base/cmtkXformListEntry.h:38,
from cmtk/Base/cmtkXformList.h:38,
from cmtk/Base/cmtkXformList.cxx:33:
cmtk/Base/cmtkVector.h:274: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
274 | #pragma omp parallel for if (Dim>1e4) reduction(+:Result)
cmtk/Base/cmtkVector.h:319: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
319 | #pragma omp parallel for if (Dim>1e5)
cmtk/Base/cmtkVector.h:343: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
343 | #pragma omp parallel for if (Dim>1e4)
cmtk/Base/cmtkVector.h:357: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
357 | #pragma omp parallel for if (Dim>1e4)
cmtk/Base/cmtkVector.h:369: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
369 | #pragma omp parallel for if (Dim>1e4)
In file included from cmtk/Base/cmtkVector.cxx:32:
cmtk/Base/cmtkVector.h:274: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
274 | #pragma omp parallel for if (Dim>1e4) reduction(+:Result)
In file included from cmtk/Base/cmtkVector.h:438:
cmtk/Base/cmtkVector.txx:51: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
51 | #pragma omp parallel for if (p.Dim>1e4)
cmtk/Base/cmtkVector.h:319: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
319 | #pragma omp parallel for if (Dim>1e5)
cmtk/Base/cmtkVector.txx:70: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
70 | #pragma omp parallel for if (p.Dim>1e4)
cmtk/Base/cmtkVector.h:343: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
343 | #pragma omp parallel for if (Dim>1e4)
cmtk/Base/cmtkVector.txx:87: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
87 | #pragma omp parallel for if (p.Dim>1e4)
cmtk/Base/cmtkVector.h:357: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
357 | #pragma omp parallel for if (Dim>1e4)
cmtk/Base/cmtkVector.txx:104: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
104 | #pragma omp parallel for if (p.Dim>1e4)
cmtk/Base/cmtkVector.h:369: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
369 | #pragma omp parallel for if (Dim>1e4)
cmtk/Base/cmtkVector.txx:122: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
122 | #pragma omp parallel for if (p.Dim>1e4)
In file included from cmtk/Base/cmtkVector.h:438:
cmtk/Base/cmtkVector.txx:51: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
51 | #pragma omp parallel for if (p.Dim>1e4)
cmtk/Base/cmtkVector.txx:70: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
70 | #pragma omp parallel for if (p.Dim>1e4)
cmtk/Base/cmtkVector.txx:87: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
87 | #pragma omp parallel for if (p.Dim>1e4)
cmtk/Base/cmtkVector.txx:104: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
104 | #pragma omp parallel for if (p.Dim>1e4)
cmtk/Base/cmtkVector.txx:122: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
122 | #pragma omp parallel for if (p.Dim>1e4)
In file included from cmtk/Base/cmtkXform.h:40,
from cmtk/Base/cmtkWarpXform.h:38,
from cmtk/Base/cmtkWarpXform.cxx:33:
cmtk/Base/cmtkVector.h:274: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
274 | #pragma omp parallel for if (Dim>1e4) reduction(+:Result)
cmtk/Base/cmtkVector.h:319: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
319 | #pragma omp parallel for if (Dim>1e5)
cmtk/Base/cmtkVector.h:343: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
343 | #pragma omp parallel for if (Dim>1e4)
cmtk/Base/cmtkVector.h:357: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
357 | #pragma omp parallel for if (Dim>1e4)
cmtk/Base/cmtkVector.h:369: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
369 | #pragma omp parallel for if (Dim>1e4)
In file included from cmtk/Base/cmtkVector.h:438:
cmtk/Base/cmtkVector.txx:51: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
51 | #pragma omp parallel for if (p.Dim>1e4)
cmtk/Base/cmtkVector.txx:70: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
70 | #pragma omp parallel for if (p.Dim>1e4)
In file included from cmtk/Base/cmtkXform.h:40,
from cmtk/Base/cmtkWarpXform.h:38,
from cmtk/Base/cmtkSplineWarpXform.h:38,
from cmtk/Base/cmtkSplineWarpXform_Inverse.cxx:33:
cmtk/Base/cmtkVector.h:274: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
274 | #pragma omp parallel for if (Dim>1e4) reduction(+:Result)
cmtk/Base/cmtkVector.txx:87: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
87 | #pragma omp parallel for if (p.Dim>1e4)
cmtk/Base/cmtkVector.txx:104: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
104 | #pragma omp parallel for if (p.Dim>1e4)
cmtk/Base/cmtkVector.h:319: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
319 | #pragma omp parallel for if (Dim>1e5)
cmtk/Base/cmtkVector.txx:122: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
122 | #pragma omp parallel for if (p.Dim>1e4)
cmtk/Base/cmtkVector.h:343: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
343 | #pragma omp parallel for if (Dim>1e4)
cmtk/Base/cmtkVector.h:357: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
357 | #pragma omp parallel for if (Dim>1e4)
cmtk/Base/cmtkVector.h:369: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
369 | #pragma omp parallel for if (Dim>1e4)
In file included from cmtk/Base/cmtkVector.h:438:
cmtk/Base/cmtkVector.txx:51: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
51 | #pragma omp parallel for if (p.Dim>1e4)
cmtk/Base/cmtkVector.txx:70: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
70 | #pragma omp parallel for if (p.Dim>1e4)
cmtk/Base/cmtkVector.txx:87: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
87 | #pragma omp parallel for if (p.Dim>1e4)
cmtk/Base/cmtkVector.txx:104: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
104 | #pragma omp parallel for if (p.Dim>1e4)
cmtk/Base/cmtkVector.txx:122: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
122 | #pragma omp parallel for if (p.Dim>1e4)
In file included from cmtk/Base/cmtkXform.h:40,
from cmtk/Base/cmtkXformListEntry.h:38,
from cmtk/Base/cmtkXformListEntry.cxx:33:
cmtk/Base/cmtkVector.h:274: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
274 | #pragma omp parallel for if (Dim>1e4) reduction(+:Result)
cmtk/Base/cmtkVector.h:319: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
319 | #pragma omp parallel for if (Dim>1e5)
cmtk/Base/cmtkVector.h:343: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
343 | #pragma omp parallel for if (Dim>1e4)
cmtk/Base/cmtkVector.h:357: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
357 | #pragma omp parallel for if (Dim>1e4)
cmtk/Base/cmtkVector.h:369: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
369 | #pragma omp parallel for if (Dim>1e4)
In file included from cmtk/Base/cmtkVector.h:438:
cmtk/Base/cmtkVector.txx:51: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
51 | #pragma omp parallel for if (p.Dim>1e4)
cmtk/Base/cmtkVector.txx:70: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
70 | #pragma omp parallel for if (p.Dim>1e4)
cmtk/Base/cmtkVector.txx:87: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
87 | #pragma omp parallel for if (p.Dim>1e4)
cmtk/Base/cmtkVector.txx:104: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
104 | #pragma omp parallel for if (p.Dim>1e4)
cmtk/Base/cmtkVector.txx:122: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
122 | #pragma omp parallel for if (p.Dim>1e4)
In file included from cmtk/Base/cmtkXform.h:40,
from cmtk/Base/cmtkWarpXform.h:38,
from cmtk/Base/cmtkSplineWarpXform.h:38,
from cmtk/Base/cmtkSplineWarpXform_Jacobian.cxx:33:
cmtk/Base/cmtkVector.h:274: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
274 | #pragma omp parallel for if (Dim>1e4) reduction(+:Result)
cmtk/Base/cmtkVector.h:319: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
319 | #pragma omp parallel for if (Dim>1e5)
In file included from cmtk/Base/cmtkXform.h:40,
from cmtk/Base/cmtkWarpXform.h:38,
from cmtk/Base/cmtkSplineWarpXform.h:38,
from cmtk/Base/cmtkSplineWarpXform_Rigidity.cxx:33:
cmtk/Base/cmtkVector.h:274: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
274 | #pragma omp parallel for if (Dim>1e4) reduction(+:Result)
cmtk/Base/cmtkVector.h:343: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
343 | #pragma omp parallel for if (Dim>1e4)
cmtk/Base/cmtkVector.h:357: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
357 | #pragma omp parallel for if (Dim>1e4)
cmtk/Base/cmtkVector.h:369: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
369 | #pragma omp parallel for if (Dim>1e4)
cmtk/Base/cmtkVector.h:319: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
319 | #pragma omp parallel for if (Dim>1e5)
cmtk/Base/cmtkVector.h:343: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
343 | #pragma omp parallel for if (Dim>1e4)
cmtk/Base/cmtkVector.h:357: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
357 | #pragma omp parallel for if (Dim>1e4)
cmtk/Base/cmtkVector.h:369: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
369 | #pragma omp parallel for if (Dim>1e4)
In file included from cmtk/Base/cmtkVector.h:438:
cmtk/Base/cmtkVector.txx:51: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
51 | #pragma omp parallel for if (p.Dim>1e4)
cmtk/Base/cmtkVector.txx:70: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
70 | #pragma omp parallel for if (p.Dim>1e4)
cmtk/Base/cmtkVector.txx:87: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
87 | #pragma omp parallel for if (p.Dim>1e4)
In file included from cmtk/Base/cmtkVector.h:438:
cmtk/Base/cmtkVector.txx:51: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
51 | #pragma omp parallel for if (p.Dim>1e4)
cmtk/Base/cmtkVector.txx:104: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
104 | #pragma omp parallel for if (p.Dim>1e4)
cmtk/Base/cmtkVector.txx:70: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
70 | #pragma omp parallel for if (p.Dim>1e4)
cmtk/Base/cmtkVector.txx:122: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
122 | #pragma omp parallel for if (p.Dim>1e4)
cmtk/Base/cmtkVector.txx:87: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
87 | #pragma omp parallel for if (p.Dim>1e4)
cmtk/Base/cmtkVector.txx:104: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
104 | #pragma omp parallel for if (p.Dim>1e4)
cmtk/Base/cmtkVector.txx:122: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
122 | #pragma omp parallel for if (p.Dim>1e4)
In file included from cmtk/Base/cmtkAffineXform.h:39,
from cmtk/Base/cmtkAnatomicalOrientation.h:47,
from cmtk/Base/cmtkDataGrid.h:47,
from cmtk/Base/cmtkDataGrid_Crop.cxx:35:
cmtk/Base/cmtkVector.h:274: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
274 | #pragma omp parallel for if (Dim>1e4) reduction(+:Result)
cmtk/Base/cmtkVector.h:319: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
319 | #pragma omp parallel for if (Dim>1e5)
cmtk/Base/cmtkVector.h:343: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
343 | #pragma omp parallel for if (Dim>1e4)
cmtk/Base/cmtkVector.h:357: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
357 | #pragma omp parallel for if (Dim>1e4)
cmtk/Base/cmtkVector.h:369: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
369 | #pragma omp parallel for if (Dim>1e4)
In file included from cmtk/Base/cmtkVector.h:438:
cmtk/Base/cmtkVector.txx:51: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
51 | #pragma omp parallel for if (p.Dim>1e4)
cmtk/Base/cmtkVector.txx:70: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
70 | #pragma omp parallel for if (p.Dim>1e4)
cmtk/Base/cmtkVector.txx:87: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
87 | #pragma omp parallel for if (p.Dim>1e4)
cmtk/Base/cmtkVector.txx:104: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
104 | #pragma omp parallel for if (p.Dim>1e4)
cmtk/Base/cmtkVector.txx:122: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
122 | #pragma omp parallel for if (p.Dim>1e4)
In file included from cmtk/Base/cmtkXform.h:40,
from cmtk/Base/cmtkXform.cxx:33:
cmtk/Base/cmtkVector.h:274: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
274 | #pragma omp parallel for if (Dim>1e4) reduction(+:Result)
cmtk/Base/cmtkVector.h:319: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
319 | #pragma omp parallel for if (Dim>1e5)
cmtk/Base/cmtkVector.h:343: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
343 | #pragma omp parallel for if (Dim>1e4)
cmtk/Base/cmtkVector.h:357: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
357 | #pragma omp parallel for if (Dim>1e4)
cmtk/Base/cmtkVector.h:369: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
369 | #pragma omp parallel for if (Dim>1e4)
In file included from cmtk/Base/cmtkVector.h:438:
cmtk/Base/cmtkVector.txx:51: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
51 | #pragma omp parallel for if (p.Dim>1e4)
cmtk/Base/cmtkVector.txx:70: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
70 | #pragma omp parallel for if (p.Dim>1e4)
cmtk/Base/cmtkVector.txx:87: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
87 | #pragma omp parallel for if (p.Dim>1e4)
cmtk/Base/cmtkVector.txx:104: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
104 | #pragma omp parallel for if (p.Dim>1e4)
cmtk/Base/cmtkVector.txx:122: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
122 | #pragma omp parallel for if (p.Dim>1e4)
In file included from cmtk/Base/cmtkXform.h:40,
from cmtk/Base/cmtkPolynomialXform.h:38,
from cmtk/Base/cmtkPolynomialXform.cxx:33:
cmtk/Base/cmtkVector.h:274: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
274 | #pragma omp parallel for if (Dim>1e4) reduction(+:Result)
cmtk/Base/cmtkVector.h:319: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
319 | #pragma omp parallel for if (Dim>1e5)
cmtk/Base/cmtkVector.h:343: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
343 | #pragma omp parallel for if (Dim>1e4)
cmtk/Base/cmtkVector.h:357: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
357 | #pragma omp parallel for if (Dim>1e4)
cmtk/Base/cmtkVector.h:369: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
369 | #pragma omp parallel for if (Dim>1e4)
In file included from cmtk/Base/cmtkVector.h:438:
cmtk/Base/cmtkVector.txx:51: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
51 | #pragma omp parallel for if (p.Dim>1e4)
cmtk/Base/cmtkVector.txx:70: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
70 | #pragma omp parallel for if (p.Dim>1e4)
cmtk/Base/cmtkVector.txx:87: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
87 | #pragma omp parallel for if (p.Dim>1e4)
cmtk/Base/cmtkVector.txx:104: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
104 | #pragma omp parallel for if (p.Dim>1e4)
cmtk/Base/cmtkVector.txx:122: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
122 | #pragma omp parallel for if (p.Dim>1e4)
In file included from cmtk/Base/cmtkAffineXform.h:39,
from cmtk/Base/cmtkAnatomicalOrientation.h:47,
from cmtk/Base/cmtkAnatomicalOrientation.cxx:35:
cmtk/Base/cmtkVector.h:274: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
274 | #pragma omp parallel for if (Dim>1e4) reduction(+:Result)
cmtk/Base/cmtkVector.h:319: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
319 | #pragma omp parallel for if (Dim>1e5)
cmtk/Base/cmtkVector.h:343: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
343 | #pragma omp parallel for if (Dim>1e4)
cmtk/Base/cmtkVector.h:357: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
357 | #pragma omp parallel for if (Dim>1e4)
cmtk/Base/cmtkVector.h:369: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
369 | #pragma omp parallel for if (Dim>1e4)
In file included from cmtk/Base/cmtkVector.h:438:
cmtk/Base/cmtkVector.txx:51: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
51 | #pragma omp parallel for if (p.Dim>1e4)
cmtk/Base/cmtkVector.txx:70: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
70 | #pragma omp parallel for if (p.Dim>1e4)
cmtk/Base/cmtkVector.txx:87: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
87 | #pragma omp parallel for if (p.Dim>1e4)
cmtk/Base/cmtkVector.txx:104: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
104 | #pragma omp parallel for if (p.Dim>1e4)
cmtk/Base/cmtkVector.txx:122: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
122 | #pragma omp parallel for if (p.Dim>1e4)
In file included from cmtk/Base/cmtkXform.h:40,
from cmtk/Base/cmtkXform_Inverse.cxx:33:
cmtk/Base/cmtkVector.h:274: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
274 | #pragma omp parallel for if (Dim>1e4) reduction(+:Result)
cmtk/Base/cmtkVector.h:319: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
319 | #pragma omp parallel for if (Dim>1e5)
cmtk/Base/cmtkVector.h:343: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
343 | #pragma omp parallel for if (Dim>1e4)
cmtk/Base/cmtkVector.h:357: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
357 | #pragma omp parallel for if (Dim>1e4)
cmtk/Base/cmtkVector.h:369: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
369 | #pragma omp parallel for if (Dim>1e4)
In file included from cmtk/Base/cmtkVector.h:438:
cmtk/Base/cmtkVector.txx:51: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
51 | #pragma omp parallel for if (p.Dim>1e4)
cmtk/Base/cmtkVector.txx:70: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
70 | #pragma omp parallel for if (p.Dim>1e4)
cmtk/Base/cmtkVector.txx:87: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
87 | #pragma omp parallel for if (p.Dim>1e4)
cmtk/Base/cmtkVector.txx:104: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
104 | #pragma omp parallel for if (p.Dim>1e4)
cmtk/Base/cmtkVector.txx:122: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
122 | #pragma omp parallel for if (p.Dim>1e4)
In file included from cmtk/Base/cmtkXform.h:40,
from cmtk/Base/cmtkWarpXform.h:38,
from cmtk/Base/cmtkSplineWarpXform.h:38,
from cmtk/Base/cmtkSplineWarpXform.cxx:33:
cmtk/Base/cmtkVector.h:274: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
274 | #pragma omp parallel for if (Dim>1e4) reduction(+:Result)
cmtk/Base/cmtkVector.h:319: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
319 | #pragma omp parallel for if (Dim>1e5)
cmtk/Base/cmtkVector.h:343: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
343 | #pragma omp parallel for if (Dim>1e4)
cmtk/Base/cmtkVector.h:357: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
357 | #pragma omp parallel for if (Dim>1e4)
cmtk/Base/cmtkVector.h:369: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
369 | #pragma omp parallel for if (Dim>1e4)
In file included from cmtk/Base/cmtkVector.h:438:
cmtk/Base/cmtkVector.txx:51: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
51 | #pragma omp parallel for if (p.Dim>1e4)
cmtk/Base/cmtkVector.txx:70: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
70 | #pragma omp parallel for if (p.Dim>1e4)
cmtk/Base/cmtkVector.txx:87: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
87 | #pragma omp parallel for if (p.Dim>1e4)
cmtk/Base/cmtkVector.txx:104: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
104 | #pragma omp parallel for if (p.Dim>1e4)
cmtk/Base/cmtkVector.txx:122: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
122 | #pragma omp parallel for if (p.Dim>1e4)
In file included from cmtk/Base/cmtkAffineXform.h:39,
from cmtk/Base/cmtkAnatomicalOrientation.h:47,
from cmtk/Base/cmtkDataGrid.h:47,
from cmtk/Base/cmtkDataGrid.cxx:35:
cmtk/Base/cmtkVector.h:274: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
274 | #pragma omp parallel for if (Dim>1e4) reduction(+:Result)
cmtk/Base/cmtkVector.h:319: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
319 | #pragma omp parallel for if (Dim>1e5)
cmtk/Base/cmtkVector.h:343: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
343 | #pragma omp parallel for if (Dim>1e4)
cmtk/Base/cmtkVector.h:357: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
357 | #pragma omp parallel for if (Dim>1e4)
cmtk/Base/cmtkVector.h:369: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
369 | #pragma omp parallel for if (Dim>1e4)
In file included from cmtk/Base/cmtkVector.h:438:
cmtk/Base/cmtkVector.txx:51: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
51 | #pragma omp parallel for if (p.Dim>1e4)
cmtk/Base/cmtkVector.txx:70: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
70 | #pragma omp parallel for if (p.Dim>1e4)
cmtk/Base/cmtkVector.txx:87: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
87 | #pragma omp parallel for if (p.Dim>1e4)
cmtk/Base/cmtkVector.txx:104: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
104 | #pragma omp parallel for if (p.Dim>1e4)
cmtk/Base/cmtkVector.txx:122: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
122 | #pragma omp parallel for if (p.Dim>1e4)
In file included from cmtk/Base/cmtkAffineXform.h:39,
from cmtk/Base/cmtkAnatomicalOrientation.h:47,
from cmtk/Base/cmtkAnatomicalOrientationPermutationMatrix.cxx:35:
cmtk/Base/cmtkVector.h:274: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
274 | #pragma omp parallel for if (Dim>1e4) reduction(+:Result)
cmtk/Base/cmtkVector.h:319: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
319 | #pragma omp parallel for if (Dim>1e5)
cmtk/Base/cmtkVector.h:343: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
343 | #pragma omp parallel for if (Dim>1e4)
cmtk/Base/cmtkVector.h:357: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
357 | #pragma omp parallel for if (Dim>1e4)
cmtk/Base/cmtkVector.h:369: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
369 | #pragma omp parallel for if (Dim>1e4)
In file included from cmtk/Base/cmtkVector.h:438:
cmtk/Base/cmtkVector.txx:51: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
51 | #pragma omp parallel for if (p.Dim>1e4)
cmtk/Base/cmtkVector.txx:70: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
70 | #pragma omp parallel for if (p.Dim>1e4)
cmtk/Base/cmtkVector.txx:87: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
87 | #pragma omp parallel for if (p.Dim>1e4)
cmtk/Base/cmtkVector.txx:104: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
104 | #pragma omp parallel for if (p.Dim>1e4)
cmtk/Base/cmtkVector.txx:122: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
122 | #pragma omp parallel for if (p.Dim>1e4)
In file included from cmtk/Base/cmtkCompatibilityMatrix4x4.h:39,
from cmtk/Base/cmtkCompatibilityMatrix4x4.cxx:33:
cmtk/Base/cmtkVector.h:274: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
274 | #pragma omp parallel for if (Dim>1e4) reduction(+:Result)
cmtk/Base/cmtkVector.h:319: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
319 | #pragma omp parallel for if (Dim>1e5)
cmtk/Base/cmtkVector.h:343: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
343 | #pragma omp parallel for if (Dim>1e4)
cmtk/Base/cmtkVector.h:357: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
357 | #pragma omp parallel for if (Dim>1e4)
cmtk/Base/cmtkVector.h:369: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
369 | #pragma omp parallel for if (Dim>1e4)
In file included from cmtk/Base/cmtkVector.h:438:
cmtk/Base/cmtkVector.txx:51: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
51 | #pragma omp parallel for if (p.Dim>1e4)
cmtk/Base/cmtkVector.txx:70: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
70 | #pragma omp parallel for if (p.Dim>1e4)
cmtk/Base/cmtkVector.txx:87: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
87 | #pragma omp parallel for if (p.Dim>1e4)
cmtk/Base/cmtkVector.txx:104: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
104 | #pragma omp parallel for if (p.Dim>1e4)
cmtk/Base/cmtkVector.txx:122: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
122 | #pragma omp parallel for if (p.Dim>1e4)
cmtk/Base/cmtkSplineWarpXform.cxx:659: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
659 | #pragma omp parallel for reduction(+:energy)
cmtk/Base/cmtkDataGrid.cxx:128: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
128 | #pragma omp parallel for
cmtk/Base/cmtkDataGrid.cxx:190: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
190 | #pragma omp parallel for
In file included from cmtk/Base/cmtkXform.h:40,
from cmtk/IO/cmtkXformIO.h:38,
from cmtk_stubs.cpp:6:
cmtk/Base/cmtkVector.h:274: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
274 | #pragma omp parallel for if (Dim>1e4) reduction(+:Result)
cmtk/Base/cmtkVector.h:319: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
319 | #pragma omp parallel for if (Dim>1e5)
cmtk/Base/cmtkVector.h:343: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
343 | #pragma omp parallel for if (Dim>1e4)
cmtk/Base/cmtkVector.h:357: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
357 | #pragma omp parallel for if (Dim>1e4)
cmtk/Base/cmtkVector.h:369: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
369 | #pragma omp parallel for if (Dim>1e4)
In file included from cmtk/Base/cmtkVector.h:438:
cmtk/Base/cmtkVector.txx:51: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
51 | #pragma omp parallel for if (p.Dim>1e4)
cmtk/Base/cmtkVector.txx:70: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
70 | #pragma omp parallel for if (p.Dim>1e4)
cmtk/Base/cmtkVector.txx:87: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
87 | #pragma omp parallel for if (p.Dim>1e4)
cmtk/Base/cmtkVector.txx:104: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
104 | #pragma omp parallel for if (p.Dim>1e4)
cmtk/Base/cmtkVector.txx:122: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
122 | #pragma omp parallel for if (p.Dim>1e4)
In file included from cmtk/Base/cmtkXform.h:40,
from streamxform.cpp:6:
cmtk/Base/cmtkVector.h:274: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
274 | #pragma omp parallel for if (Dim>1e4) reduction(+:Result)
cmtk/Base/cmtkVector.h:319: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
319 | #pragma omp parallel for if (Dim>1e5)
cmtk/Base/cmtkVector.h:343: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
343 | #pragma omp parallel for if (Dim>1e4)
cmtk/Base/cmtkVector.h:357: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
357 | #pragma omp parallel for if (Dim>1e4)
cmtk/Base/cmtkVector.h:369: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
369 | #pragma omp parallel for if (Dim>1e4)
In file included from cmtk/Base/cmtkVector.h:438:
cmtk/Base/cmtkVector.txx:51: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
51 | #pragma omp parallel for if (p.Dim>1e4)
cmtk/Base/cmtkVector.txx:70: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
70 | #pragma omp parallel for if (p.Dim>1e4)
cmtk/Base/cmtkVector.txx:87: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
87 | #pragma omp parallel for if (p.Dim>1e4)
cmtk/Base/cmtkVector.txx:104: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
104 | #pragma omp parallel for if (p.Dim>1e4)
cmtk/Base/cmtkVector.txx:122: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
122 | #pragma omp parallel for if (p.Dim>1e4)
g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I. -Icmtk -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c cmtk/Base/cmtkUniformVolume.cxx -o cmtk/Base/cmtkUniformVolume.o
In file included from cmtk/Base/cmtkAffineXform.h:39,
from cmtk/Base/cmtkAnatomicalOrientation.h:47,
from cmtk/Base/cmtkDataGrid.h:47,
from cmtk/Base/cmtkVolume.h:40,
from cmtk/Base/cmtkUniformVolume.h:40,
from cmtk/Base/cmtkUniformVolume.cxx:35:
cmtk/Base/cmtkVector.h:274: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
274 | #pragma omp parallel for if (Dim>1e4) reduction(+:Result)
cmtk/Base/cmtkVector.h:319: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
319 | #pragma omp parallel for if (Dim>1e5)
cmtk/Base/cmtkVector.h:343: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
343 | #pragma omp parallel for if (Dim>1e4)
cmtk/Base/cmtkVector.h:357: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
357 | #pragma omp parallel for if (Dim>1e4)
cmtk/Base/cmtkVector.h:369: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
369 | #pragma omp parallel for if (Dim>1e4)
In file included from cmtk/Base/cmtkVector.h:438:
cmtk/Base/cmtkVector.txx:51: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
51 | #pragma omp parallel for if (p.Dim>1e4)
cmtk/Base/cmtkVector.txx:70: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
70 | #pragma omp parallel for if (p.Dim>1e4)
cmtk/Base/cmtkVector.txx:87: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
87 | #pragma omp parallel for if (p.Dim>1e4)
cmtk/Base/cmtkVector.txx:104: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
104 | #pragma omp parallel for if (p.Dim>1e4)
cmtk/Base/cmtkVector.txx:122: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
122 | #pragma omp parallel for if (p.Dim>1e4)
g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I. -Icmtk -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c cmtk/Base/cmtkUniformVolume_Crop.cxx -o cmtk/Base/cmtkUniformVolume_Crop.o
In file included from cmtk/Base/cmtkQRDecomposition.h:98,
from cmtk/Base/cmtkMatrix4x4.cxx:37:
cmtk/Base/cmtkQRDecomposition.txx: In instantiation of ‘cmtk::Matrix2D<T>& cmtk::QRDecomposition<TFloat>::GetQ() [with TFloat = double]’:
cmtk/Base/cmtkMatrix4x4.cxx:182:32: required from ‘bool cmtk::Matrix4x4<T>::Decompose(cmtk::Types::Coordinate*, const cmtk::Types::Coordinate*, bool) const [with T = double; cmtk::Types::Coordinate = double]’
182 | const Matrix2D<T> Q = qr.GetQ();
| ~~~~~~~^~
cmtk/Base/cmtkMatrix4x4.cxx:421:16: required from here
421 | template class Matrix4x4<Types::Coordinate>;
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
cmtk/Base/cmtkQRDecomposition.txx:90:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
90 | for ( int j = 0; j < this->m_Rows; j++ )
| ~~^~~~~~~~~~~~~~
cmtk/Base/cmtkQRDecomposition.txx:91:26: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
91 | for ( int i = 0; i < this->m_Cols; i++ )
| ~~^~~~~~~~~~~~~~
g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I. -Icmtk -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c cmtk/Base/cmtkUniformVolume_Differential.cxx -o cmtk/Base/cmtkUniformVolume_Differential.o
In file included from cmtk/Base/cmtkAffineXform.h:39,
from cmtk/Base/cmtkAnatomicalOrientation.h:47,
from cmtk/Base/cmtkDataGrid.h:47,
from cmtk/Base/cmtkVolume.h:40,
from cmtk/Base/cmtkUniformVolume.h:40,
from cmtk/Base/cmtkUniformVolume_Crop.cxx:33:
cmtk/Base/cmtkVector.h:274: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
274 | #pragma omp parallel for if (Dim>1e4) reduction(+:Result)
cmtk/Base/cmtkVector.h:319: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
319 | #pragma omp parallel for if (Dim>1e5)
cmtk/Base/cmtkVector.h:343: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
343 | #pragma omp parallel for if (Dim>1e4)
cmtk/Base/cmtkVector.h:357: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
357 | #pragma omp parallel for if (Dim>1e4)
cmtk/Base/cmtkVector.h:369: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
369 | #pragma omp parallel for if (Dim>1e4)
In file included from cmtk/Base/cmtkVector.h:438:
cmtk/Base/cmtkVector.txx:51: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
51 | #pragma omp parallel for if (p.Dim>1e4)
cmtk/Base/cmtkVector.txx:70: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
70 | #pragma omp parallel for if (p.Dim>1e4)
cmtk/Base/cmtkVector.txx:87: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
87 | #pragma omp parallel for if (p.Dim>1e4)
cmtk/Base/cmtkVector.txx:104: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
104 | #pragma omp parallel for if (p.Dim>1e4)
cmtk/Base/cmtkVector.txx:122: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
122 | #pragma omp parallel for if (p.Dim>1e4)
g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I. -Icmtk -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c cmtk/Base/cmtkUniformVolume_Resample.cxx -o cmtk/Base/cmtkUniformVolume_Resample.o
g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I. -Icmtk -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c cmtk/Base/cmtkUniformVolume_Space.cxx -o cmtk/Base/cmtkUniformVolume_Space.o
g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I. -Icmtk -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c cmtk/Base/cmtkVolume.cxx -o cmtk/Base/cmtkVolume.o
g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I. -Icmtk -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c cmtk/Base/cmtkTypedArray.cxx -o cmtk/Base/cmtkTypedArray.o
In file included from cmtk/Base/cmtkAffineXform.h:39,
from cmtk/Base/cmtkAnatomicalOrientation.h:47,
from cmtk/Base/cmtkDataGrid.h:47,
from cmtk/Base/cmtkVolume.h:40,
from cmtk/Base/cmtkUniformVolume.h:40,
from cmtk/Base/cmtkUniformVolume_Differential.cxx:33:
cmtk/Base/cmtkVector.h:274: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
274 | #pragma omp parallel for if (Dim>1e4) reduction(+:Result)
cmtk/Base/cmtkVector.h:319: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
319 | #pragma omp parallel for if (Dim>1e5)
cmtk/Base/cmtkVector.h:343: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
343 | #pragma omp parallel for if (Dim>1e4)
cmtk/Base/cmtkVector.h:357: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
357 | #pragma omp parallel for if (Dim>1e4)
cmtk/Base/cmtkVector.h:369: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
369 | #pragma omp parallel for if (Dim>1e4)
In file included from cmtk/Base/cmtkVector.h:438:
cmtk/Base/cmtkVector.txx:51: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
51 | #pragma omp parallel for if (p.Dim>1e4)
cmtk/Base/cmtkVector.txx:70: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
70 | #pragma omp parallel for if (p.Dim>1e4)
cmtk/Base/cmtkVector.txx:87: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
87 | #pragma omp parallel for if (p.Dim>1e4)
cmtk/Base/cmtkVector.txx:104: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
104 | #pragma omp parallel for if (p.Dim>1e4)
cmtk/Base/cmtkVector.txx:122: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
122 | #pragma omp parallel for if (p.Dim>1e4)
g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I. -Icmtk -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c cmtk/Base/cmtkTypedArray_Statistics.cxx -o cmtk/Base/cmtkTypedArray_Statistics.o
g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I. -Icmtk -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c cmtk/Base/cmtkScalarImage.cxx -o cmtk/Base/cmtkScalarImage.o
g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I. -Icmtk -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c cmtk/Base/cmtkHistogram.cxx -o cmtk/Base/cmtkHistogram.o
In file included from cmtk/Base/cmtkAffineXform.h:39,
from cmtk/Base/cmtkAnatomicalOrientation.h:47,
from cmtk/Base/cmtkDataGrid.h:47,
from cmtk/Base/cmtkVolume.h:40,
from cmtk/Base/cmtkVolume.cxx:35:
cmtk/Base/cmtkVector.h:274: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
274 | #pragma omp parallel for if (Dim>1e4) reduction(+:Result)
cmtk/Base/cmtkVector.h:319: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
319 | #pragma omp parallel for if (Dim>1e5)
cmtk/Base/cmtkVector.h:343: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
343 | #pragma omp parallel for if (Dim>1e4)
cmtk/Base/cmtkVector.h:357: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
357 | #pragma omp parallel for if (Dim>1e4)
cmtk/Base/cmtkVector.h:369: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
369 | #pragma omp parallel for if (Dim>1e4)
In file included from cmtk/Base/cmtkVector.h:438:
cmtk/Base/cmtkVector.txx:51: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
51 | #pragma omp parallel for if (p.Dim>1e4)
cmtk/Base/cmtkVector.txx:70: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
70 | #pragma omp parallel for if (p.Dim>1e4)
cmtk/Base/cmtkVector.txx:87: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
87 | #pragma omp parallel for if (p.Dim>1e4)
cmtk/Base/cmtkVector.txx:104: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
104 | #pragma omp parallel for if (p.Dim>1e4)
cmtk/Base/cmtkVector.txx:122: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
122 | #pragma omp parallel for if (p.Dim>1e4)
g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I. -Icmtk -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c cmtk/Base/cmtkLandmark.cxx -o cmtk/Base/cmtkLandmark.o
In file included from cmtk/Base/cmtkAffineXform.h:39,
from cmtk/Base/cmtkAnatomicalOrientation.h:47,
from cmtk/Base/cmtkDataGrid.h:47,
from cmtk/Base/cmtkVolume.h:40,
from cmtk/Base/cmtkUniformVolume.h:40,
from cmtk/Base/cmtkUniformVolume_Resample.cxx:33:
cmtk/Base/cmtkVector.h:274: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
274 | #pragma omp parallel for if (Dim>1e4) reduction(+:Result)
cmtk/Base/cmtkVector.h:319: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
319 | #pragma omp parallel for if (Dim>1e5)
cmtk/Base/cmtkVector.h:343: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
343 | #pragma omp parallel for if (Dim>1e4)
cmtk/Base/cmtkVector.h:357: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
357 | #pragma omp parallel for if (Dim>1e4)
cmtk/Base/cmtkVector.h:369: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
369 | #pragma omp parallel for if (Dim>1e4)
In file included from cmtk/Base/cmtkTypedArray.cxx:34:
cmtk/Base/cmtkTemplateArray.h:311: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
311 | #pragma omp parallel for
In file included from cmtk/Base/cmtkVector.h:438:
cmtk/Base/cmtkVector.txx:51: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
51 | #pragma omp parallel for if (p.Dim>1e4)
cmtk/Base/cmtkTemplateArray.h:324: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
324 | #pragma omp parallel for
cmtk/Base/cmtkVector.txx:70: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
70 | #pragma omp parallel for if (p.Dim>1e4)
cmtk/Base/cmtkVector.txx:87: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
87 | #pragma omp parallel for if (p.Dim>1e4)
cmtk/Base/cmtkTemplateArray.h:345: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
345 | #pragma omp parallel for
cmtk/Base/cmtkVector.txx:104: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
104 | #pragma omp parallel for if (p.Dim>1e4)
cmtk/Base/cmtkTemplateArray.h:379: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
379 | #pragma omp parallel for
cmtk/Base/cmtkVector.txx:122: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
122 | #pragma omp parallel for if (p.Dim>1e4)
cmtk/Base/cmtkTemplateArray.h:399: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
399 | #pragma omp parallel for
cmtk/Base/cmtkTemplateArray.h:417: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
417 | #pragma omp parallel for
cmtk/Base/cmtkTemplateArray.h:431: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
431 | #pragma omp parallel for
cmtk/Base/cmtkTemplateArray.h:549: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
549 | #pragma omp parallel for
In file included from cmtk/Base/cmtkTemplateArray.h:699:
cmtk/Base/cmtkTemplateArray.txx:224: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
224 | #pragma omp parallel for if (this->DataSize>1e5)
cmtk/Base/cmtkTemplateArray.txx:241: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
241 | #pragma omp parallel for if (this->DataSize>1e5)
cmtk/Base/cmtkTemplateArray.txx:254: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
254 | #pragma omp parallel for if (this->DataSize>1e5)
cmtk/Base/cmtkTemplateArray.txx:274: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
274 | #pragma omp parallel for if (len>1e5)
cmtk/Base/cmtkTemplateArray.txx:279: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
279 | #pragma omp parallel for if (len>1e5)
cmtk/Base/cmtkTemplateArray.txx:284: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
284 | #pragma omp parallel for if (len>1e5)
cmtk/Base/cmtkTemplateArray.txx:289: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
289 | #pragma omp parallel for if (len>1e5)
cmtk/Base/cmtkTemplateArray.txx:294: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
294 | #pragma omp parallel for if (len>1e5)
In file included from cmtk/Base/cmtkAffineXform.h:39,
from cmtk/Base/cmtkAnatomicalOrientation.h:47,
from cmtk/Base/cmtkDataGrid.h:47,
from cmtk/Base/cmtkVolume.h:40,
from cmtk/Base/cmtkUniformVolume.h:40,
from cmtk/Base/cmtkUniformVolume_Space.cxx:35:
cmtk/Base/cmtkVector.h:274: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
274 | #pragma omp parallel for if (Dim>1e4) reduction(+:Result)
cmtk/Base/cmtkVector.h:319: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
319 | #pragma omp parallel for if (Dim>1e5)
cmtk/Base/cmtkVector.h:343: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
343 | #pragma omp parallel for if (Dim>1e4)
cmtk/Base/cmtkVector.h:357: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
357 | #pragma omp parallel for if (Dim>1e4)
cmtk/Base/cmtkVector.h:369: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
369 | #pragma omp parallel for if (Dim>1e4)
In file included from cmtk/Base/cmtkVector.h:438:
cmtk/Base/cmtkVector.txx:51: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
51 | #pragma omp parallel for if (p.Dim>1e4)
cmtk/Base/cmtkVector.txx:70: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
70 | #pragma omp parallel for if (p.Dim>1e4)
cmtk/Base/cmtkVector.txx:87: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
87 | #pragma omp parallel for if (p.Dim>1e4)
cmtk/Base/cmtkVector.txx:104: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
104 | #pragma omp parallel for if (p.Dim>1e4)
cmtk/Base/cmtkVector.txx:122: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
122 | #pragma omp parallel for if (p.Dim>1e4)
cmtk/Base/cmtkTemplateArray.txx:299: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
299 | #pragma omp parallel for if (len>1e5)
cmtk/Base/cmtkTemplateArray.txx:304: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
304 | #pragma omp parallel for if (len>1e5)
cmtk/Base/cmtkTemplateArray.txx:309: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
309 | #pragma omp parallel for if (len>1e5)
cmtk/Base/cmtkTemplateArray.txx:348: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
348 | #pragma omp parallel for
cmtk/Base/cmtkTemplateArray.txx:364: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
364 | #pragma omp parallel for
g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I. -Icmtk -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c cmtk/Base/cmtkLandmarkList.cxx -o cmtk/Base/cmtkLandmarkList.o
g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I. -Icmtk -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c cmtk/Base/cmtkLandmarkPair.cxx -o cmtk/Base/cmtkLandmarkPair.o
cmtk/Base/cmtkUniformVolume.cxx: In member function ‘virtual cmtk::ScalarImage::SmartPtr cmtk::UniformVolume::GetOrthoSliceInterp(int, cmtk::Types::Coordinate) const’:
cmtk/Base/cmtkUniformVolume.cxx:454:43: warning: comparison of integer expressions of different signedness: ‘cmtk::Types::GridIndexType’ {aka ‘long long int’} and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
454 | for ( Types::GridIndexType idx = 0; idx < data0->GetDataSize(); ++idx )
| ~~~~^~~~~~~~~~~~~~~~~~~~~~
g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I. -Icmtk -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c cmtk/Base/cmtkMathUtil_LinAlg.cxx -o cmtk/Base/cmtkMathUtil_LinAlg.o
g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I. -Icmtk -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c cmtk/Base/cmtkVolumeGridToGridLookup.cxx -o cmtk/Base/cmtkVolumeGridToGridLookup.o
g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I. -Icmtk -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c cmtk/IO/cmtkXformIO.cxx -o cmtk/IO/cmtkXformIO.o
g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I. -Icmtk -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c cmtk/IO/cmtkXformListIO.cxx -o cmtk/IO/cmtkXformListIO.o
g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I. -Icmtk -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c cmtk/IO/cmtkClassStreamAffineXform.cxx -o cmtk/IO/cmtkClassStreamAffineXform.o
In file included from cmtk/Base/cmtkXform.h:40,
from cmtk/IO/cmtkXformIO.h:38,
from cmtk/IO/cmtkXformIO.cxx:33:
cmtk/Base/cmtkVector.h:274: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
274 | #pragma omp parallel for if (Dim>1e4) reduction(+:Result)
cmtk/Base/cmtkVector.h:319: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
319 | #pragma omp parallel for if (Dim>1e5)
cmtk/Base/cmtkVector.h:343: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
343 | #pragma omp parallel for if (Dim>1e4)
cmtk/Base/cmtkVector.h:357: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
357 | #pragma omp parallel for if (Dim>1e4)
cmtk/Base/cmtkVector.h:369: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
369 | #pragma omp parallel for if (Dim>1e4)
In file included from cmtk/Base/cmtkVector.h:438:
cmtk/Base/cmtkVector.txx:51: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
51 | #pragma omp parallel for if (p.Dim>1e4)
cmtk/Base/cmtkVector.txx:70: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
70 | #pragma omp parallel for if (p.Dim>1e4)
cmtk/Base/cmtkVector.txx:87: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
87 | #pragma omp parallel for if (p.Dim>1e4)
cmtk/Base/cmtkVector.txx:104: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
104 | #pragma omp parallel for if (p.Dim>1e4)
cmtk/Base/cmtkVector.txx:122: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
122 | #pragma omp parallel for if (p.Dim>1e4)
In file included from cmtk/Base/cmtkAffineXform.h:39,
from cmtk/Base/cmtkAnatomicalOrientation.h:47,
from cmtk/Base/cmtkDataGrid.h:47,
from cmtk/Base/cmtkVolume.h:40,
from cmtk/Base/cmtkUniformVolume.h:40,
from cmtk/Base/cmtkVolumeGridToGridLookup.h:38,
from cmtk/Base/cmtkVolumeGridToGridLookup.cxx:33:
cmtk/Base/cmtkVector.h:274: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
274 | #pragma omp parallel for if (Dim>1e4) reduction(+:Result)
cmtk/Base/cmtkVector.h:319: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
319 | #pragma omp parallel for if (Dim>1e5)
cmtk/Base/cmtkVector.h:343: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
343 | #pragma omp parallel for if (Dim>1e4)
cmtk/Base/cmtkVector.h:357: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
357 | #pragma omp parallel for if (Dim>1e4)
cmtk/Base/cmtkVector.h:369: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
369 | #pragma omp parallel for if (Dim>1e4)
In file included from cmtk/Base/cmtkVector.h:438:
cmtk/Base/cmtkVector.txx:51: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
51 | #pragma omp parallel for if (p.Dim>1e4)
cmtk/Base/cmtkVector.txx:70: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
70 | #pragma omp parallel for if (p.Dim>1e4)
cmtk/Base/cmtkVector.txx:87: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
87 | #pragma omp parallel for if (p.Dim>1e4)
cmtk/Base/cmtkVector.txx:104: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
104 | #pragma omp parallel for if (p.Dim>1e4)
cmtk/Base/cmtkVector.txx:122: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
122 | #pragma omp parallel for if (p.Dim>1e4)
In file included from cmtk/Base/cmtkXform.h:40,
from cmtk/Base/cmtkXformListEntry.h:38,
from cmtk/Base/cmtkXformList.h:38,
from cmtk/IO/cmtkXformListIO.h:38,
from cmtk/IO/cmtkXformListIO.cxx:33:
cmtk/Base/cmtkVector.h:274: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
274 | #pragma omp parallel for if (Dim>1e4) reduction(+:Result)
cmtk/Base/cmtkVector.h:319: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
319 | #pragma omp parallel for if (Dim>1e5)
cmtk/Base/cmtkVector.h:343: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
343 | #pragma omp parallel for if (Dim>1e4)
cmtk/Base/cmtkVector.h:357: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
357 | #pragma omp parallel for if (Dim>1e4)
cmtk/Base/cmtkVector.h:369: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
369 | #pragma omp parallel for if (Dim>1e4)
In file included from cmtk/Base/cmtkVector.h:438:
cmtk/Base/cmtkVector.txx:51: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
51 | #pragma omp parallel for if (p.Dim>1e4)
cmtk/Base/cmtkVector.txx:70: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
70 | #pragma omp parallel for if (p.Dim>1e4)
cmtk/Base/cmtkVector.txx:87: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
87 | #pragma omp parallel for if (p.Dim>1e4)
cmtk/Base/cmtkVector.txx:104: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
104 | #pragma omp parallel for if (p.Dim>1e4)
cmtk/Base/cmtkVector.txx:122: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
122 | #pragma omp parallel for if (p.Dim>1e4)
g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I. -Icmtk -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c cmtk/IO/cmtkClassStreamWarpXform.cxx -o cmtk/IO/cmtkClassStreamWarpXform.o
In file included from cmtk/Base/cmtkAffineXform.h:39,
from cmtk/Base/cmtkAnatomicalOrientation.h:47,
from cmtk/Base/cmtkDataGrid.h:47,
from cmtk/Base/cmtkVolume.h:40,
from cmtk/IO/cmtkStudy.h:39,
from cmtk/IO/cmtkClassStreamInput.h:39,
from cmtk/IO/cmtkClassStreamAffineXform.h:38,
from cmtk/IO/cmtkClassStreamAffineXform.cxx:33:
cmtk/Base/cmtkVector.h:274: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
274 | #pragma omp parallel for if (Dim>1e4) reduction(+:Result)
cmtk/Base/cmtkVector.h:319: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
319 | #pragma omp parallel for if (Dim>1e5)
cmtk/Base/cmtkVector.h:343: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
343 | #pragma omp parallel for if (Dim>1e4)
cmtk/Base/cmtkVector.h:357: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
357 | #pragma omp parallel for if (Dim>1e4)
cmtk/Base/cmtkVector.h:369: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
369 | #pragma omp parallel for if (Dim>1e4)
In file included from cmtk/Base/cmtkVector.h:438:
cmtk/Base/cmtkVector.txx:51: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
51 | #pragma omp parallel for if (p.Dim>1e4)
cmtk/Base/cmtkVector.txx:70: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
70 | #pragma omp parallel for if (p.Dim>1e4)
cmtk/Base/cmtkVector.txx:87: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
87 | #pragma omp parallel for if (p.Dim>1e4)
cmtk/Base/cmtkVector.txx:104: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
104 | #pragma omp parallel for if (p.Dim>1e4)
cmtk/Base/cmtkVector.txx:122: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
122 | #pragma omp parallel for if (p.Dim>1e4)
g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I. -Icmtk -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c cmtk/IO/cmtkClassStreamPolynomialXform.cxx -o cmtk/IO/cmtkClassStreamPolynomialXform.o
In file included from cmtk/Base/cmtkAffineXform.h:39,
from cmtk/Base/cmtkAnatomicalOrientation.h:47,
from cmtk/Base/cmtkDataGrid.h:47,
from cmtk/Base/cmtkVolume.h:40,
from cmtk/IO/cmtkStudy.h:39,
from cmtk/IO/cmtkClassStreamInput.h:39,
from cmtk/IO/cmtkClassStreamWarpXform.cxx:33:
cmtk/Base/cmtkVector.h:274: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
274 | #pragma omp parallel for if (Dim>1e4) reduction(+:Result)
cmtk/Base/cmtkVector.h:319: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
319 | #pragma omp parallel for if (Dim>1e5)
cmtk/Base/cmtkVector.h:343: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
343 | #pragma omp parallel for if (Dim>1e4)
cmtk/Base/cmtkVector.h:357: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
357 | #pragma omp parallel for if (Dim>1e4)
cmtk/Base/cmtkVector.h:369: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
369 | #pragma omp parallel for if (Dim>1e4)
In file included from cmtk/Base/cmtkVector.h:438:
cmtk/Base/cmtkVector.txx:51: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
51 | #pragma omp parallel for if (p.Dim>1e4)
cmtk/Base/cmtkVector.txx:70: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
70 | #pragma omp parallel for if (p.Dim>1e4)
cmtk/Base/cmtkVector.txx:87: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
87 | #pragma omp parallel for if (p.Dim>1e4)
cmtk/Base/cmtkVector.txx:104: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
104 | #pragma omp parallel for if (p.Dim>1e4)
cmtk/Base/cmtkVector.txx:122: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
122 | #pragma omp parallel for if (p.Dim>1e4)
In file included from cmtk/Base/cmtkAffineXform.h:39,
from cmtk/Base/cmtkAnatomicalOrientation.h:47,
from cmtk/Base/cmtkDataGrid.h:47,
from cmtk/Base/cmtkVolume.h:40,
from cmtk/IO/cmtkStudy.h:39,
from cmtk/IO/cmtkClassStreamInput.h:39,
from cmtk/IO/cmtkClassStreamPolynomialXform.h:38,
from cmtk/IO/cmtkClassStreamPolynomialXform.cxx:33:
cmtk/Base/cmtkVector.h:274: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
274 | #pragma omp parallel for if (Dim>1e4) reduction(+:Result)
cmtk/Base/cmtkVector.h:319: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
319 | #pragma omp parallel for if (Dim>1e5)
cmtk/Base/cmtkVector.h:343: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
343 | #pragma omp parallel for if (Dim>1e4)
cmtk/Base/cmtkVector.h:357: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
357 | #pragma omp parallel for if (Dim>1e4)
cmtk/Base/cmtkVector.h:369: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
369 | #pragma omp parallel for if (Dim>1e4)
In file included from cmtk/Base/cmtkVector.h:438:
cmtk/Base/cmtkVector.txx:51: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
51 | #pragma omp parallel for if (p.Dim>1e4)
cmtk/Base/cmtkVector.txx:70: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
70 | #pragma omp parallel for if (p.Dim>1e4)
cmtk/Base/cmtkVector.txx:87: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
87 | #pragma omp parallel for if (p.Dim>1e4)
cmtk/Base/cmtkVector.txx:104: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
104 | #pragma omp parallel for if (p.Dim>1e4)
cmtk/Base/cmtkVector.txx:122: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
122 | #pragma omp parallel for if (p.Dim>1e4)
g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I. -Icmtk -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c cmtk/IO/cmtkTypedStream.cxx -o cmtk/IO/cmtkTypedStream.o
g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I. -Icmtk -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c cmtk/IO/cmtkTypedStreamInput.cxx -o cmtk/IO/cmtkTypedStreamInput.o
g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I. -Icmtk -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c cmtk/IO/cmtkTypedStreamOutput.cxx -o cmtk/IO/cmtkTypedStreamOutput.o
g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I. -Icmtk -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c cmtk/IO/cmtkTypedStreamStudylist.cxx -o cmtk/IO/cmtkTypedStreamStudylist.o
g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I. -Icmtk -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c cmtk/IO/cmtkFileFormat.cxx -o cmtk/IO/cmtkFileFormat.o
g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I. -Icmtk -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c cmtk/IO/cmtkAffineXformITKIO.cxx -o cmtk/IO/cmtkAffineXformITKIO.o
g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I. -Icmtk -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c cmtk/System/cmtkConsole.cxx -o cmtk/System/cmtkConsole.o
In file included from cmtk/Base/cmtkAffineXform.h:39,
from cmtk/IO/cmtkTypedStreamStudylist.h:38,
from cmtk/IO/cmtkTypedStreamStudylist.cxx:33:
cmtk/Base/cmtkVector.h:274: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
274 | #pragma omp parallel for if (Dim>1e4) reduction(+:Result)
cmtk/Base/cmtkVector.h:319: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
319 | #pragma omp parallel for if (Dim>1e5)
cmtk/Base/cmtkVector.h:343: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
343 | #pragma omp parallel for if (Dim>1e4)
cmtk/Base/cmtkVector.h:357: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
357 | #pragma omp parallel for if (Dim>1e4)
cmtk/Base/cmtkVector.h:369: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
369 | #pragma omp parallel for if (Dim>1e4)
In file included from cmtk/Base/cmtkVector.h:438:
cmtk/Base/cmtkVector.txx:51: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
51 | #pragma omp parallel for if (p.Dim>1e4)
cmtk/Base/cmtkVector.txx:70: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
70 | #pragma omp parallel for if (p.Dim>1e4)
cmtk/Base/cmtkVector.txx:87: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
87 | #pragma omp parallel for if (p.Dim>1e4)
cmtk/Base/cmtkVector.txx:104: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
104 | #pragma omp parallel for if (p.Dim>1e4)
cmtk/Base/cmtkVector.txx:122: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
122 | #pragma omp parallel for if (p.Dim>1e4)
g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I. -Icmtk -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c cmtk/System/cmtkFileUtils.cxx -o cmtk/System/cmtkFileUtils.o
g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I. -Icmtk -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c cmtk/System/cmtkMountPoints.cxx -o cmtk/System/cmtkMountPoints.o
In file included from cmtk/Base/cmtkAffineXform.h:39,
from cmtk/IO/cmtkAffineXformITKIO.h:36,
from cmtk/IO/cmtkAffineXformITKIO.cxx:31:
cmtk/Base/cmtkVector.h:274: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
274 | #pragma omp parallel for if (Dim>1e4) reduction(+:Result)
cmtk/Base/cmtkVector.h:319: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
319 | #pragma omp parallel for if (Dim>1e5)
cmtk/Base/cmtkVector.h:343: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
343 | #pragma omp parallel for if (Dim>1e4)
cmtk/Base/cmtkVector.h:357: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
357 | #pragma omp parallel for if (Dim>1e4)
cmtk/Base/cmtkVector.h:369: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
369 | #pragma omp parallel for if (Dim>1e4)
In file included from cmtk/Base/cmtkVector.h:438:
cmtk/Base/cmtkVector.txx:51: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
51 | #pragma omp parallel for if (p.Dim>1e4)
cmtk/Base/cmtkVector.txx:70: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
70 | #pragma omp parallel for if (p.Dim>1e4)
cmtk/Base/cmtkVector.txx:87: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
87 | #pragma omp parallel for if (p.Dim>1e4)
cmtk/Base/cmtkVector.txx:104: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
104 | #pragma omp parallel for if (p.Dim>1e4)
cmtk/Base/cmtkVector.txx:122: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
122 | #pragma omp parallel for if (p.Dim>1e4)
g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I. -Icmtk -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c cmtk/System/cmtkStrUtility.cxx -o cmtk/System/cmtkStrUtility.o
g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I. -Icmtk -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c cmtk/System/cmtkMemory.cxx -o cmtk/System/cmtkMemory.o
g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I. -Icmtk -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c cmtk/System/cmtkCompressedStream.cxx -o cmtk/System/cmtkCompressedStream.o
g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I. -Icmtk -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c cmtk/System/cmtkCompressedStreamFile.cxx -o cmtk/System/cmtkCompressedStreamFile.o
g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I. -Icmtk -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c cmtk/System/cmtkCompressedStreamZlib.cxx -o cmtk/System/cmtkCompressedStreamZlib.o
g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I. -Icmtk -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c cmtk/System/cmtkCompressedStreamPipe.cxx -o cmtk/System/cmtkCompressedStreamPipe.o
g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I. -Icmtk -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c cmtk/System/cmtkCompressedStreamReaderBase.cxx -o cmtk/System/cmtkCompressedStreamReaderBase.o
g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I. -Icmtk -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c cmtk/System/cmtkThreads.cxx -o cmtk/System/cmtkThreads.o
g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I. -Icmtk -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c cmtk/System/cmtkThreadPoolGCD.cxx -o cmtk/System/cmtkThreadPoolGCD.o
g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I. -Icmtk -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c cmtk/System/cmtkSafeCounterGCD.cxx -o cmtk/System/cmtkSafeCounterGCD.o
g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I. -Icmtk -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c cmtk/System/cmtkThreadPoolThreads.cxx -o cmtk/System/cmtkThreadPoolThreads.o
g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I. -Icmtk -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c cmtk/System/cmtkThreadSemaphore.cxx -o cmtk/System/cmtkThreadSemaphore.o
g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I. -Icmtk -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c cmtk/System/cmtkProgress.cxx -o cmtk/System/cmtkProgress.o
g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I. -Icmtk -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c cmtk/Numerics/ap.cxx -o cmtk/Numerics/ap.o
g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I. -Icmtk -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c cmtk/Numerics/blas.cxx -o cmtk/Numerics/blas.o
g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I. -Icmtk -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c cmtk/Numerics/rotations.cxx -o cmtk/Numerics/rotations.o
g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I. -Icmtk -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c cmtk/Numerics/tdevd.cxx -o cmtk/Numerics/tdevd.o
g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I. -Icmtk -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c cmtk/Numerics/sblas.cxx -o cmtk/Numerics/sblas.o
g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I. -Icmtk -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c cmtk/Numerics/reflections.cxx -o cmtk/Numerics/reflections.o
g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I. -Icmtk -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c cmtk/Numerics/tridiagonal.cxx -o cmtk/Numerics/tridiagonal.o
g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I. -Icmtk -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c cmtk/Numerics/cholesky.cxx -o cmtk/Numerics/cholesky.o
g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I. -Icmtk -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c cmtk/Numerics/bidiagonal.cxx -o cmtk/Numerics/bidiagonal.o
g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I. -Icmtk -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c cmtk/Numerics/qr.cxx -o cmtk/Numerics/qr.o
g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I. -Icmtk -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c cmtk/Numerics/lq.cxx -o cmtk/Numerics/lq.o
g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I. -Icmtk -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c cmtk/Numerics/bdsvd.cxx -o cmtk/Numerics/bdsvd.o
g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I. -Icmtk -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c cmtk/Numerics/sevd.cxx -o cmtk/Numerics/sevd.o
g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I. -Icmtk -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c cmtk/Numerics/spddet.cxx -o cmtk/Numerics/spddet.o
g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I. -Icmtk -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c cmtk/Numerics/svd.cxx -o cmtk/Numerics/svd.o
g++ -std=gnu++20 -shared -L/usr/local/lib64 -o cmtkr.so RcppExports.o streamxform.o cmtk_stubs.o cmtk/Base/cmtkXform.o cmtk/Base/cmtkXform_Inverse.o cmtk/Base/cmtkXformList.o cmtk/Base/cmtkXformListEntry.o cmtk/Base/cmtkAffineXform.o cmtk/Base/cmtkWarpXform.o cmtk/Base/cmtkSplineWarpXform.o cmtk/Base/cmtkSplineWarpXform_Inverse.o cmtk/Base/cmtkSplineWarpXform_Jacobian.o cmtk/Base/cmtkSplineWarpXform_Rigidity.o cmtk/Base/cmtkPolynomialXform.o cmtk/Base/cmtkTypes.o cmtk/Base/cmtkMatrix3x3.o cmtk/Base/cmtkMatrix4x4.o cmtk/Base/cmtkCompatibilityMatrix4x4.o cmtk/Base/cmtkVector.o cmtk/Base/cmtkBitVector.o cmtk/Base/cmtkMetaInformationObject.o cmtk/Base/cmtkAnatomicalOrientation.o cmtk/Base/cmtkAnatomicalOrientationBase.o cmtk/Base/cmtkAnatomicalOrientationPermutationMatrix.o cmtk/Base/cmtkDataGrid.o cmtk/Base/cmtkDataGrid_Crop.o cmtk/Base/cmtkUniformVolume.o cmtk/Base/cmtkUniformVolume_Crop.o cmtk/Base/cmtkUniformVolume_Differential.o cmtk/Base/cmtkUniformVolume_Resample.o cmtk/Base/cmtkUniformVolume_Space.o cmtk/Base/cmtkVolume.o cmtk/Base/cmtkTypedArray.o cmtk/Base/cmtkTypedArray_Statistics.o cmtk/Base/cmtkScalarImage.o cmtk/Base/cmtkHistogram.o cmtk/Base/cmtkLandmark.o cmtk/Base/cmtkLandmarkList.o cmtk/Base/cmtkLandmarkPair.o cmtk/Base/cmtkMathUtil_LinAlg.o cmtk/Base/cmtkVolumeGridToGridLookup.o cmtk/IO/cmtkXformIO.o cmtk/IO/cmtkXformListIO.o cmtk/IO/cmtkClassStreamAffineXform.o cmtk/IO/cmtkClassStreamWarpXform.o cmtk/IO/cmtkClassStreamPolynomialXform.o cmtk/IO/cmtkTypedStream.o cmtk/IO/cmtkTypedStreamInput.o cmtk/IO/cmtkTypedStreamOutput.o cmtk/IO/cmtkTypedStreamStudylist.o cmtk/IO/cmtkFileFormat.o cmtk/IO/cmtkAffineXformITKIO.o cmtk/System/cmtkConsole.o cmtk/System/cmtkFileUtils.o cmtk/System/cmtkMountPoints.o cmtk/System/cmtkStrUtility.o cmtk/System/cmtkMemory.o cmtk/System/cmtkCompressedStream.o cmtk/System/cmtkCompressedStreamFile.o cmtk/System/cmtkCompressedStreamZlib.o cmtk/System/cmtkCompressedStreamPipe.o cmtk/System/cmtkCompressedStreamReaderBase.o cmtk/System/cmtkThreads.o cmtk/System/cmtkThreadPoolGCD.o cmtk/System/cmtkSafeCounterGCD.o cmtk/System/cmtkThreadPoolThreads.o cmtk/System/cmtkThreadSemaphore.o cmtk/System/cmtkProgress.o cmtk/Numerics/ap.o cmtk/Numerics/blas.o cmtk/Numerics/rotations.o cmtk/Numerics/tdevd.o cmtk/Numerics/sblas.o cmtk/Numerics/reflections.o cmtk/Numerics/tridiagonal.o cmtk/Numerics/cholesky.o cmtk/Numerics/bidiagonal.o cmtk/Numerics/qr.o cmtk/Numerics/lq.o cmtk/Numerics/bdsvd.o cmtk/Numerics/sevd.o cmtk/Numerics/spddet.o cmtk/Numerics/svd.o -lz -lpthread
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/cmtkr/src'
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/cmtkr/src'
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/cmtkr/src'
installing to /data/gannet/ripley/R/packages/tests-devel/cmtkr.Rcheck/00LOCK-cmtkr/00new/cmtkr/libs
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (cmtkr)