* installing *source* package ‘cifmodeling’ ...
** this is package ‘cifmodeling’ version ‘0.9.4’
** package ‘cifmodeling’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C++ compiler: ‘g++ (GCC) 15.1.1 20250521 (Red Hat 15.1.1-2)’
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/cifmodeling/src'
g++ -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection   -c RcppExports.cpp -o RcppExports.o
g++ -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection   -c calculateAJ_Rcpp.cpp -o calculateAJ_Rcpp.o
g++ -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection   -c calculateKM.cpp -o calculateKM.o
calculateAJ_Rcpp.cpp: In function ‘Rcpp::List calculateAJ_Rcpp(Rcpp::NumericVector, Rcpp::IntegerVector, Rcpp::Nullable<Rcpp::Vector<14, Rcpp::PreserveStorage> >, Rcpp::Nullable<Rcpp::Vector<13> >, std::string, std::string, double, bool, double)’:
calculateAJ_Rcpp.cpp:520:60: warning: ‘void* __builtin_memcpy(void*, const void*, long unsigned int)’ reading between 8 and 34359738368 bytes from a region of size 0 [-Wstringop-overread]
  520 |         for (int j = 0; j < Uall - 1; ++j) se_cif_delta[j] = tmp[j + 1];
cc1plus: note: source object is likely at address zero
calculateAJ_Rcpp.cpp:515:60: warning: ‘void* __builtin_memcpy(void*, const void*, long unsigned int)’ reading between 8 and 34359738368 bytes from a region of size 0 [-Wstringop-overread]
  515 |         for (int j = 0; j < Uall - 1; ++j) se_cif_aalen[j] = tmp[j + 1];
cc1plus: note: source object is likely at address zero
g++ -std=gnu++17 -shared -L/usr/local/lib64 -o cifmodeling.so RcppExports.o calculateAJ_Rcpp.o calculateKM.o
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/cifmodeling/src'
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/cifmodeling/src'
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/cifmodeling/src'
installing to /data/gannet/ripley/R/packages/tests-devel/cifmodeling.Rcheck/00LOCK-cifmodeling/00new/cifmodeling/libs
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
*** copying figures
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (cifmodeling)