* installing *source* package ‘cglasso’ ... ** package ‘cglasso’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘gcc-13 (GCC) 13.2.0’ using Fortran compiler: ‘GNU Fortran (GCC) 13.2.0’ make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/cglasso/src' gfortran-13 -fpic -g -O2 -mtune=native -Wall -pedantic -c Find_ConnectedComp.f90 -o Find_ConnectedComp.o gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c FortranR_interface.c -o FortranR_interface.o gfortran-13 -fpic -g -O2 -mtune=native -Wall -pedantic -c cggm_v1.f90 -o cggm_v1.o gfortran-13 -fpic -g -O2 -mtune=native -Wall -pedantic -c cggm_v2.f90 -o cggm_v2.o gfortran-13 -fpic -g -O2 -mtune=native -Wall -pedantic -c cglasso_v1.f90 -o cglasso_v1.o gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c cglasso_v1_trace.c -o cglasso_v1_trace.o gfortran-13 -fpic -g -O2 -mtune=native -Wall -pedantic -c cglasso_v2.f90 -o cglasso_v2.o gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c cglasso_v2_trace.c -o cglasso_v2_trace.o gfortran-13 -fpic -g -O2 -mtune=native -Wall -pedantic -c dfs.f90 -o dfs.o gfortran-13 -fpic -g -O2 -mtune=native -Wall -pedantic -c e_step_v2.f90 -o e_step_v2.o gfortran-13 -fpic -g -O2 -mtune=native -Wall -pedantic -c fitmcgm.f90 -o fitmcgm.o gfortran-13 -fpic -g -O2 -mtune=native -Wall -pedantic -c glasso_bcd.f90 -o glasso_bcd.o gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c glasso_trace.c -o glasso_trace.o gfortran-13 -fpic -g -O2 -mtune=native -Wall -pedantic -c glassosub.f90 -o glassosub.o gfortran-13 -fpic -g -O2 -mtune=native -Wall -pedantic -c impute.f90 -o impute.o gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c init.c -o init.o gfortran-13 -fpic -g -O2 -mtune=native -Wall -pedantic -c inv.f90 -o inv.o gfortran-13 -fpic -g -O2 -mtune=native -Wall -pedantic -c lasso.f90 -o lasso.o gfortran-13 -fpic -g -O2 -mtune=native -Wall -pedantic -c lasso_h.f90 -o lasso_h.o gfortran-13 -fpic -g -O2 -mtune=native -Wall -pedantic -c multilasso.f90 -o multilasso.o gfortran-13 -fpic -g -O2 -mtune=native -Wall -pedantic -c predict.f90 -o predict.o gfortran-13 -fpic -g -O2 -mtune=native -Wall -pedantic -c setup.f90 -o setup.o gcc-13 -shared -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -fpic -L/usr/local/gcc13/lib64 -L/usr/local/lib64 -L/usr/local/clang18/lib/x86_64-unknown-linux-gnu -o cglasso.so Find_ConnectedComp.o FortranR_interface.o cggm_v1.o cggm_v2.o cglasso_v1.o cglasso_v1_trace.o cglasso_v2.o cglasso_v2_trace.o dfs.o e_step_v2.o fitmcgm.o glasso_bcd.o glasso_trace.o glassosub.o impute.o init.o inv.o lasso.o lasso_h.o multilasso.o predict.o setup.o -llapack -L/data/gannet/ripley/R/R-devel/lib -lRblas -lgfortran -lm -lquadmath -lgfortran -lm -lquadmath make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/cglasso/src' make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/cglasso/src' make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/cglasso/src' installing to /data/gannet/ripley/R/packages/tests-devel/cglasso.Rcheck/00LOCK-cglasso/00new/cglasso/libs ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (cglasso)