* installing *source* package ‘cdlsim’ ...
** this is package ‘cdlsim’ version ‘0.1.0’
** package ‘cdlsim’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C++ compiler: ‘g++ (GCC) 15.2.1 20260123 (Red Hat 15.2.1-7)’
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/cdlsim/src'
g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection   -c RcppExports.cpp -o RcppExports.o
g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection   -c transition_function.cpp -o transition_function.o
transition_function.cpp: In function ‘Rcpp::IntegerVector transition_patches(Rcpp::NumericVector, Rcpp::NumericVector, Rcpp::List, int)’:
transition_function.cpp:143:7: warning: unused variable ‘row_index’ [-Wunused-variable]
  143 |   int row_index = -1;
      |       ^~~~~~~~~
transition_function.cpp:144:7: warning: unused variable ‘new_value_index’ [-Wunused-variable]
  144 |   int new_value_index = 0;
      |       ^~~~~~~~~~~~~~~
g++ -std=gnu++20 -shared -L/usr/local/lib64 -o cdlsim.so RcppExports.o transition_function.o
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/cdlsim/src'
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/cdlsim/src'
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/cdlsim/src'
installing to /data/gannet/ripley/R/packages/tests-devel/cdlsim.Rcheck/00LOCK-cdlsim/00new/cdlsim/libs
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
*** copying figures
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (cdlsim)