* installing *source* package ‘bpvars’ ... ** this is package ‘bpvars’ version ‘1.0’ ** package ‘bpvars’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘g++ (GCC) 15.1.1 20250521 (Red Hat 15.1.1-2)’ make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/bpvars/src' g++ -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I'/data/gannet/ripley/R/test-dev/bsvars/include' -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/RcppArmadillo/include' -I'/data/gannet/ripley/R/test-dev/RcppProgress/include' -I'/data/gannet/ripley/R/test-dev/RcppTN/include' -I/usr/local/include -fopenmp -DARMA_64BIT_WORD=1 -DARMA_USE_CURRENT -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c RcppExports.cpp -o RcppExports.o g++ -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I'/data/gannet/ripley/R/test-dev/bsvars/include' -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/RcppArmadillo/include' -I'/data/gannet/ripley/R/test-dev/RcppProgress/include' -I'/data/gannet/ripley/R/test-dev/RcppTN/include' -I/usr/local/include -fopenmp -DARMA_64BIT_WORD=1 -DARMA_USE_CURRENT -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c bvarGroupPANEL.cpp -o bvarGroupPANEL.o g++ -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I'/data/gannet/ripley/R/test-dev/bsvars/include' -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/RcppArmadillo/include' -I'/data/gannet/ripley/R/test-dev/RcppProgress/include' -I'/data/gannet/ripley/R/test-dev/RcppTN/include' -I/usr/local/include -fopenmp -DARMA_64BIT_WORD=1 -DARMA_USE_CURRENT -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c bvarGroupPriorPANEL.cpp -o bvarGroupPriorPANEL.o g++ -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I'/data/gannet/ripley/R/test-dev/bsvars/include' -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/RcppArmadillo/include' -I'/data/gannet/ripley/R/test-dev/RcppProgress/include' -I'/data/gannet/ripley/R/test-dev/RcppTN/include' -I/usr/local/include -fopenmp -DARMA_64BIT_WORD=1 -DARMA_USE_CURRENT -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c bvarPANEL.cpp -o bvarPANEL.o g++ -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I'/data/gannet/ripley/R/test-dev/bsvars/include' -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/RcppArmadillo/include' -I'/data/gannet/ripley/R/test-dev/RcppProgress/include' -I'/data/gannet/ripley/R/test-dev/RcppTN/include' -I/usr/local/include -fopenmp -DARMA_64BIT_WORD=1 -DARMA_USE_CURRENT -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c bvars.cpp -o bvars.o g++ -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I'/data/gannet/ripley/R/test-dev/bsvars/include' -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/RcppArmadillo/include' -I'/data/gannet/ripley/R/test-dev/RcppProgress/include' -I'/data/gannet/ripley/R/test-dev/RcppTN/include' -I/usr/local/include -fopenmp -DARMA_64BIT_WORD=1 -DARMA_USE_CURRENT -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c forecast_panel.cpp -o forecast_panel.o g++ -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I'/data/gannet/ripley/R/test-dev/bsvars/include' -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/RcppArmadillo/include' -I'/data/gannet/ripley/R/test-dev/RcppProgress/include' -I'/data/gannet/ripley/R/test-dev/RcppTN/include' -I/usr/local/include -fopenmp -DARMA_64BIT_WORD=1 -DARMA_USE_CURRENT -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c forecast_performance.cpp -o forecast_performance.o g++ -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I'/data/gannet/ripley/R/test-dev/bsvars/include' -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/RcppArmadillo/include' -I'/data/gannet/ripley/R/test-dev/RcppProgress/include' -I'/data/gannet/ripley/R/test-dev/RcppTN/include' -I/usr/local/include -fopenmp -DARMA_64BIT_WORD=1 -DARMA_USE_CURRENT -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c missing.cpp -o missing.o missing.cpp: In function ‘arma::mat sample_missing(arma::mat&, arma::mat&, arma::mat&, arma::mat&, arma::mat&, arma::mat&, arma::mat&)’: missing.cpp:106:13: warning: unused variable ‘K’ [-Wunused-variable] 106 | const int K = A_c.n_rows; | ^ g++ -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I'/data/gannet/ripley/R/test-dev/bsvars/include' -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/RcppArmadillo/include' -I'/data/gannet/ripley/R/test-dev/RcppProgress/include' -I'/data/gannet/ripley/R/test-dev/RcppTN/include' -I/usr/local/include -fopenmp -DARMA_64BIT_WORD=1 -DARMA_USE_CURRENT -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c panel_variance_decompositions.cpp -o panel_variance_decompositions.o g++ -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I'/data/gannet/ripley/R/test-dev/bsvars/include' -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/RcppArmadillo/include' -I'/data/gannet/ripley/R/test-dev/RcppProgress/include' -I'/data/gannet/ripley/R/test-dev/RcppTN/include' -I/usr/local/include -fopenmp -DARMA_64BIT_WORD=1 -DARMA_USE_CURRENT -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c rtmvtnorm.cpp -o rtmvtnorm.o g++ -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I'/data/gannet/ripley/R/test-dev/bsvars/include' -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/RcppArmadillo/include' -I'/data/gannet/ripley/R/test-dev/RcppProgress/include' -I'/data/gannet/ripley/R/test-dev/RcppTN/include' -I/usr/local/include -fopenmp -DARMA_64BIT_WORD=1 -DARMA_USE_CURRENT -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c sample_mniw.cpp -o sample_mniw.o sample_mniw.cpp:99:3: warning: multi-line comment [-Wcomment] 99 | } // END sample_m_bvar\ | ^ g++ -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I'/data/gannet/ripley/R/test-dev/bsvars/include' -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/RcppArmadillo/include' -I'/data/gannet/ripley/R/test-dev/RcppProgress/include' -I'/data/gannet/ripley/R/test-dev/RcppTN/include' -I/usr/local/include -fopenmp -DARMA_64BIT_WORD=1 -DARMA_USE_CURRENT -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c utils.cpp -o utils.o sample_mniw.cpp: In function ‘double log_kernel_nu_gg(const double&, const arma::cube&, const arma::cube&, const arma::cube&, const double&, const arma::vec&, const int&, const int&, const int&)’: sample_mniw.cpp:379:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const long long unsigned int’} [-Wsign-compare] 379 | for (int i = 0; i < gg.n_elem; i++) { | ~~^~~~~~~~~~~ sample_mniw.cpp: In function ‘arma::cube sample_Sigma_g(const arma::cube&, const arma::vec&, const double&, const double&, const Rcpp::List&, const int&)’: sample_mniw.cpp:646:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const long long unsigned int’} [-Wsign-compare] 646 | for (int i = 0; i < gg.n_elem; i++) { | ~~^~~~~~~~~~~ sample_mniw.cpp: In function ‘arma::cube sample_A_g(const arma::cube&, const arma::cube&, const arma::mat&, const arma::vec&, const double&, const double&, const Rcpp::List&, const int&)’: sample_mniw.cpp:777:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const long long unsigned int’} [-Wsign-compare] 777 | for (int i = 0; i < gg.n_elem; i++) { | ~~^~~~~~~~~~~ g++ -std=gnu++17 -shared -L/usr/local/lib64 -o bpvars.so RcppExports.o bvarGroupPANEL.o bvarGroupPriorPANEL.o bvarPANEL.o bvars.o forecast_panel.o forecast_performance.o missing.o panel_variance_decompositions.o rtmvtnorm.o sample_mniw.o utils.o -fopenmp -llapack -L/data/gannet/ripley/R/R-devel/lib -lRblas -lgfortran -lm -lquadmath make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/bpvars/src' make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/bpvars/src' make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/bpvars/src' installing to /data/gannet/ripley/R/packages/tests-devel/bpvars.Rcheck/00LOCK-bpvars/00new/bpvars/libs ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (bpvars)