* installing *source* package ‘bigsparser’ ...
** package ‘bigsparser’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C++ compiler: ‘g++-14 (GCC) 14.1.0’
using C++11
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/bigsparser/src'
g++-14 -std=gnu++11 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I../inst/include -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/RcppEigen/include' -I'/data/gannet/ripley/R/test-dev/rmio/include' -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection   -c RcppExports.cpp -o RcppExports.o
g++-14 -std=gnu++11 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I../inst/include -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/RcppEigen/include' -I'/data/gannet/ripley/R/test-dev/rmio/include' -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection   -c SFBM-xptr.cpp -o SFBM-xptr.o
g++-14 -std=gnu++11 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I../inst/include -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/RcppEigen/include' -I'/data/gannet/ripley/R/test-dev/rmio/include' -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection   -c prod.cpp -o prod.o
g++-14 -std=gnu++11 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I../inst/include -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/RcppEigen/include' -I'/data/gannet/ripley/R/test-dev/rmio/include' -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection   -c solve.cpp -o solve.o
g++-14 -std=gnu++11 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I../inst/include -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/RcppEigen/include' -I'/data/gannet/ripley/R/test-dev/rmio/include' -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection   -c spmat-accessor.cpp -o spmat-accessor.o
g++-14 -std=gnu++11 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I../inst/include -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/RcppEigen/include' -I'/data/gannet/ripley/R/test-dev/rmio/include' -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection   -c write-indval.cpp -o write-indval.o
g++-14 -std=gnu++11 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I../inst/include -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/RcppEigen/include' -I'/data/gannet/ripley/R/test-dev/rmio/include' -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection   -c write-val-compact.cpp -o write-val-compact.o
In file included from /data/gannet/ripley/R/test-dev/rmio/include/mio/mmap.hpp:490,
                 from ../inst/include/bigsparser/SFBM.h:10,
                 from write-val-compact.cpp:6:
In member function 'void mio::basic_mmap<AccessMode, ByteT>::unmap() [with mio::access_mode AccessMode = mio::access_mode::write; ByteT = char]',
    inlined from 'void mio::basic_mmap<AccessMode, ByteT>::map(handle_type, size_type, size_type, std::error_code&) [with mio::access_mode AccessMode = mio::access_mode::write; ByteT = char]' at /data/gannet/ripley/R/test-dev/rmio/include/mio/detail/mmap.ipp:345:14,
    inlined from 'void mio::basic_mmap<AccessMode, ByteT>::map(const String&, size_type, size_type, std::error_code&) [with String = std::__cxx11::basic_string<char>; mio::access_mode AccessMode = mio::access_mode::write; ByteT = char]' at /data/gannet/ripley/R/test-dev/rmio/include/mio/detail/mmap.ipp:304:8,
    inlined from 'void mio::basic_mmap<AccessMode, ByteT>::map(const String&, size_type, size_type, std::error_code&) [with String = std::__cxx11::basic_string<char>; mio::access_mode AccessMode = mio::access_mode::write; ByteT = char]' at /data/gannet/ripley/R/test-dev/rmio/include/mio/detail/mmap.ipp:289:6,
    inlined from 'Rcpp::NumericVector write_val_compact(std::string, std::vector<long unsigned int>, const Rcpp::IntegerVector&, const Rcpp::NumericVector&, const Rcpp::IntegerVector&, const Rcpp::IntegerVector&, size_t, bool)' at write-val-compact.cpp:86:14:
/data/gannet/ripley/R/test-dev/rmio/include/mio/detail/mmap.ipp:409:8: warning: 'rw_mmap.mio::basic_mmap<mio::access_mode::write, char>::is_handle_internal_' may be used uninitialized [-Wmaybe-uninitialized]
  409 |     if(is_handle_internal_)
      |        ^~~~~~~~~~~~~~~~~~~
write-val-compact.cpp: In function 'Rcpp::NumericVector write_val_compact(std::string, std::vector<long unsigned int>, const Rcpp::IntegerVector&, const Rcpp::NumericVector&, const Rcpp::IntegerVector&, const Rcpp::IntegerVector&, size_t, bool)':
write-val-compact.cpp:84:18: note: 'rw_mmap' declared here
   84 |   mio::mmap_sink rw_mmap;
      |                  ^~~~~~~
g++-14 -std=gnu++11 -shared -L/usr/local/gcc14/lib64 -L/usr/local/lib64 -o bigsparser.so RcppExports.o SFBM-xptr.o prod.o solve.o spmat-accessor.o write-indval.o write-val-compact.o
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/bigsparser/src'
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/bigsparser/src'
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/bigsparser/src'
installing to /data/gannet/ripley/R/packages/tests-devel/bigsparser.Rcheck/00LOCK-bigsparser/00new/bigsparser/libs
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (bigsparser)