* installing *source* package ‘bcp’ ...
** this is package ‘bcp’ version ‘4.0.4’
** package ‘bcp’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C++ compiler: ‘g++ (GCC) 15.2.1 20260123 (Red Hat 15.2.1-7)’
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/bcp/src'
g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/RcppArmadillo/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c Cbcp.cpp -o Cbcp.o
g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/RcppArmadillo/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c CbcpM.cpp -o CbcpM.o
g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/RcppArmadillo/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c Cbcpgraph.cpp -o Cbcpgraph.o
g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/RcppArmadillo/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c CbcpgraphR.cpp -o CbcpgraphR.o
g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/RcppArmadillo/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c RcppExports.cpp -o RcppExports.o
g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/RcppArmadillo/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c utils.cpp -o utils.o
In file included from /usr/include/c++/15/bits/stl_iterator.h:78,
from /usr/include/c++/15/bits/stl_algobase.h:67,
from /usr/include/c++/15/bits/specfun.h:43,
from /usr/include/c++/15/cmath:3913,
from /data/gannet/ripley/R/test-dev/Rcpp/include/Rcpp/platform/compiler.h:37,
from /data/gannet/ripley/R/test-dev/Rcpp/include/Rcpp/r/headers.h:67,
from /data/gannet/ripley/R/test-dev/Rcpp/include/RcppCommon.h:30,
from /data/gannet/ripley/R/test-dev/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:26,
from /data/gannet/ripley/R/test-dev/RcppArmadillo/include/RcppArmadillo.h:29,
from bcp.h:5,
from CbcpM.cpp:28:
In function ‘constexpr _Tp* std::construct_at(_Tp*, _Args&& ...) [with _Tp = int; _Args = {const int&}]’,
inlined from ‘static constexpr void std::allocator_traits<std::allocator<_Up> >::construct(allocator_type&, _Up*, _Args&& ...) [with _Up = int; _Args = {const int&}; _Tp = int]’ at /usr/include/c++/15/bits/alloc_traits.h:676:21,
inlined from ‘constexpr void std::vector<_Tp, _Alloc>::_M_realloc_append(_Args&& ...) [with _Args = {const int&}; _Tp = int; _Alloc = std::allocator<int>]’ at /usr/include/c++/15/bits/vector.tcc:586:26,
inlined from ‘constexpr void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = int; _Alloc = std::allocator<int>]’ at /usr/include/c++/15/bits/stl_vector.h:1427:21,
inlined from ‘MCMCStepSeq pass(MCMCStepSeq&, HelperVariables&, Params&)’ at CbcpM.cpp:239:30:
/usr/include/c++/15/bits/stl_construct.h:110:16: warning: ‘bsize1’ may be used uninitialized [-Wmaybe-uninitialized]
110 | return ::new(__loc) _Tp(std::forward<_Args>(__args)...);
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CbcpM.cpp: In function ‘MCMCStepSeq pass(MCMCStepSeq&, HelperVariables&, Params&)’:
CbcpM.cpp:82:7: note: ‘bsize1’ was declared here
82 | int bsize1, bsize2, bsize3;
| ^~~~~~
g++ -std=gnu++20 -shared -L/usr/local/lib64 -o bcp.so Cbcp.o CbcpM.o Cbcpgraph.o CbcpgraphR.o RcppExports.o utils.o -llapack -L/data/gannet/ripley/R/R-devel/lib -lRblas -lgfortran -lm -lquadmath
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/bcp/src'
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/bcp/src'
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/bcp/src'
installing to /data/gannet/ripley/R/packages/tests-devel/bcp.Rcheck/00LOCK-bcp/00new/bcp/libs
** R
** data
*** moving datasets to lazyload DB
** demo
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (bcp)