• using R Under development (unstable) (2025-12-04 r89091)
• using platform: x86_64-pc-linux-gnu
• R was compiled by     gcc (GCC) 15.1.1 20250521 (Red Hat 15.1.1-2)     GNU Fortran (GCC) 15.1.1 20250521 (Red Hat 15.1.1-2)
• running under: Fedora Linux 42 (Workstation Edition)
• using session charset: UTF-8
• using option ‘--no-stop-on-test-error’
• checking for file ‘autostats/DESCRIPTION’ ... OK
• checking extension type ... Package
• this is package ‘autostats’ version ‘0.4.1’
• package encoding: UTF-8
• checking package namespace information ... OK
• checking package dependencies ... OK
• checking if this is a source package ... OK
• checking if there is a namespace ... OK
• checking for executable files ... OK
• checking for hidden files and directories ... OK
• checking for portable file names ... OK
• checking for sufficient/correct file permissions ... OK
• checking whether package ‘autostats’ can be installed ... [7s/29s] OK See the install log for details.
• checking package directory ... OK
• checking ‘build’ directory ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking for left-over files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking code files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... OK
• checking whether the package can be loaded with stated dependencies ... OK
• checking whether the package can be unloaded cleanly ... OK
• checking whether the namespace can be loaded with stated dependencies ... OK
• checking whether the namespace can be unloaded cleanly ... OK
• checking loading without being on the library search path ... OK
• checking use of S3 registration ... OK
• checking dependencies in R code ... NOTE Namespaces in Imports field not imported from:   ‘Ckmeans.1d.dp’ ‘broom.mixed’ ‘igraph’   All declared Imports should be used.
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... [11s/34s] OK
• checking Rd files ... OK
• checking Rd metadata ... OK
• checking Rd line widths ... OK
• checking Rd cross-references ... OK
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking Rd contents ... OK
• checking for unstated dependencies in examples ... OK
• checking installed files from ‘inst/doc’ ... OK
• checking files in ‘vignettes’ ... OK
• checking examples ... [12s/39s] ERROR Running examples in ‘autostats-Ex.R’ failed The error most likely occurred in: > ### Name: auto_variable_contributions > ### Title: Plot Variable Contributions > ### Aliases: auto_variable_contributions > > ### ** Examples > > > iris %>% + framecleaner::create_dummies() %>% + auto_variable_contributions( + tidy_formula(., target = Petal.Width) + ) 1 column(s) have become 3 dummy columns Error in if (validate & xgb_obj != "multi:softprob") { :   argument is of length zero Calls: %>% -> auto_variable_contributions Execution halted
• checking for unstated dependencies in vignettes ... OK
• checking package vignettes ... OK
• checking re-building of vignette outputs ... [74s/197s] ERROR Error(s) in re-building vignettes: --- re-building ‘autostats.Rmd’ using rmarkdown Quitting from autostats.Rmd:40-43 [unnamed-chunk-3] ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ <error/rlang_error> Error in `if (validate & xgb_obj != "multi:softprob") ...`: ! argument is of length zero --- Backtrace:     ▆  1. ├─iris %>% auto_variable_contributions(species_formula)  2. ├─autostats::auto_variable_contributions(., species_formula)  3. │ ├─base::suppressWarnings(...)  4. │ │ └─base::withCallingHandlers(...)  5. │ └─data %>% tidy_xgboost(formula, validate = FALSE)  6. └─autostats::tidy_xgboost(., formula, validate = FALSE) ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error: processing vignette 'autostats.Rmd' failed with diagnostics: argument is of length zero --- failed re-building ‘autostats.Rmd’ --- re-building ‘tidyXgboost.Rmd’ using rmarkdown Quitting from tidyXgboost.Rmd:78-89 [unnamed-chunk-4] ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ <error/rlang_error> Error in `xgb$feature_names <- nms`: ! ALTLIST classes must provide a Set_elt method [class: XGBAltrepPointerClass, pkg: xgboost] --- Backtrace:     ▆  1. ├─xgb_tuned_fit_grid %>% visualize_model()  2. ├─autostats::visualize_model(.)  3. └─autostats:::visualize_model.xgb.Booster(.)  4. └─autostats:::plot_varimp_xgboost(...) ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error: processing vignette 'tidyXgboost.Rmd' failed with diagnostics: ALTLIST classes must provide a Set_elt method [class: XGBAltrepPointerClass, pkg: xgboost] --- failed re-building ‘tidyXgboost.Rmd’ SUMMARY: processing the following files failed:   ‘autostats.Rmd’ ‘tidyXgboost.Rmd’ Error: Vignette re-building failed. Execution halted
• checking PDF version of manual ... [8s/22s] OK
• checking HTML version of manual ... OK
• checking for non-standard things in the check directory ... OK
• checking for detritus in the temp directory ... OK
• DONE

Status: 2 ERRORs, 1 NOTE