* installing *source* package ‘adbcsqlite’ ...
** package ‘adbcsqlite’ successfully unpacked and MD5 sums checked
** using staged installation
Checking for --configure-vars INCLUDE_DIR or LIB_DIR
Testing R CMD SHLIB with -lsqlite3
Success!
Testing SQLite for sqlite3_load_extension()
Success!
Found vendored ADBC
** libs
using C++ compiler: ‘g++-14 (GCC) 14.0.1 20240503 (prerelease)’
using C++17
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/adbcsqlite/src'
g++-14 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I../src/ -I../src/c/ -I../src/c/vendor/ -I../src/c/vendor/fmt/include/ -DADBC_EXPORT="" -DFMT_HEADER_ONLY=1 -D_LIBCPP_DISABLE_AVAILABILITY -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c init.cc -o init.o
gcc-14 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I../src/ -I../src/c/ -I../src/c/vendor/ -I../src/c/vendor/fmt/include/ -DADBC_EXPORT="" -DFMT_HEADER_ONLY=1 -D_LIBCPP_DISABLE_AVAILABILITY -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c c/driver/common/utils.c -o c/driver/common/utils.o
g++-14 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I../src/ -I../src/c/ -I../src/c/vendor/ -I../src/c/vendor/fmt/include/ -DADBC_EXPORT="" -DFMT_HEADER_ONLY=1 -D_LIBCPP_DISABLE_AVAILABILITY -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c c/driver/framework/base_driver.cc -o c/driver/framework/base_driver.o
g++-14 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I../src/ -I../src/c/ -I../src/c/vendor/ -I../src/c/vendor/fmt/include/ -DADBC_EXPORT="" -DFMT_HEADER_ONLY=1 -D_LIBCPP_DISABLE_AVAILABILITY -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c c/driver/framework/catalog.cc -o c/driver/framework/catalog.o
g++-14 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I../src/ -I../src/c/ -I../src/c/vendor/ -I../src/c/vendor/fmt/include/ -DADBC_EXPORT="" -DFMT_HEADER_ONLY=1 -D_LIBCPP_DISABLE_AVAILABILITY -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c c/driver/framework/objects.cc -o c/driver/framework/objects.o
In file included from /usr/local/gcc14/include/c++/14.0.1/vector:66,
from ../src/c/driver/framework/objects.h:22,
from c/driver/framework/objects.cc:18:
In member function 'void std::_Vector_base<_Tp, _Alloc>::_M_deallocate(pointer, std::size_t) [with _Tp = adbc::driver::GetObjectsHelper::ConstraintUsage; _Alloc = std::allocator<adbc::driver::GetObjectsHelper::ConstraintUsage>]',
inlined from 'std::_Vector_base<_Tp, _Alloc>::~_Vector_base() [with _Tp = adbc::driver::GetObjectsHelper::ConstraintUsage; _Alloc = std::allocator<adbc::driver::GetObjectsHelper::ConstraintUsage>]' at /usr/local/gcc14/include/c++/14.0.1/bits/stl_vector.h:368:15,
inlined from 'std::vector<_Tp, _Alloc>::~vector() [with _Tp = adbc::driver::GetObjectsHelper::ConstraintUsage; _Alloc = std::allocator<adbc::driver::GetObjectsHelper::ConstraintUsage>]' at /usr/local/gcc14/include/c++/14.0.1/bits/stl_vector.h:738:7,
inlined from 'constexpr void std::_Optional_payload_base<_Tp>::_M_destroy() [with _Tp = std::vector<adbc::driver::GetObjectsHelper::ConstraintUsage>]' at /usr/local/gcc14/include/c++/14.0.1/optional:283:35,
inlined from 'constexpr void std::_Optional_payload_base<_Tp>::_M_reset() [with _Tp = std::vector<adbc::driver::GetObjectsHelper::ConstraintUsage>]' at /usr/local/gcc14/include/c++/14.0.1/optional:314:14,
inlined from 'std::_Optional_payload<_Tp, false, _Copy, _Move>::~_Optional_payload() [with _Tp = std::vector<adbc::driver::GetObjectsHelper::ConstraintUsage>; bool _Copy = false; bool _Move = false]' at /usr/local/gcc14/include/c++/14.0.1/optional:437:65,
inlined from 'std::_Optional_base<std::vector<adbc::driver::GetObjectsHelper::ConstraintUsage>, false, false>::~_Optional_base()' at /usr/local/gcc14/include/c++/14.0.1/optional:508:12,
inlined from 'std::optional<std::vector<adbc::driver::GetObjectsHelper::ConstraintUsage> >::~optional()' at /usr/local/gcc14/include/c++/14.0.1/optional:703:11,
inlined from 'adbc::driver::GetObjectsHelper::Constraint::~Constraint()' at ../src/c/driver/framework/catalog.h:89:10,
inlined from 'constexpr void std::_Optional_payload_base<_Tp>::_M_destroy() [with _Tp = adbc::driver::GetObjectsHelper::Constraint]' at /usr/local/gcc14/include/c++/14.0.1/optional:283:35,
inlined from 'constexpr void std::_Optional_payload_base<_Tp>::_M_reset() [with _Tp = adbc::driver::GetObjectsHelper::Constraint]' at /usr/local/gcc14/include/c++/14.0.1/optional:314:14,
inlined from 'std::_Optional_payload<_Tp, false, _Copy, _Move>::~_Optional_payload() [with _Tp = adbc::driver::GetObjectsHelper::Constraint; bool _Copy = false; bool _Move = false]' at /usr/local/gcc14/include/c++/14.0.1/optional:437:65,
inlined from 'std::_Optional_base<adbc::driver::GetObjectsHelper::Constraint, false, false>::~_Optional_base()' at /usr/local/gcc14/include/c++/14.0.1/optional:508:12,
inlined from 'std::optional<adbc::driver::GetObjectsHelper::Constraint>::~optional()' at /usr/local/gcc14/include/c++/14.0.1/optional:703:11,
inlined from 'adbc::driver::Status adbc::driver::{anonymous}::GetObjectsBuilder::AppendConstraints(std::string_view, std::string_view, std::string_view)' at c/driver/framework/objects.cc:303:5,
inlined from 'adbc::driver::Status adbc::driver::{anonymous}::GetObjectsBuilder::AppendTables(std::string_view, std::string_view)' at c/driver/framework/objects.cc:177:9,
inlined from 'adbc::driver::Status adbc::driver::{anonymous}::GetObjectsBuilder::AppendSchemas(std::string_view)' at c/driver/framework/objects.cc:153:9,
inlined from 'adbc::driver::Status adbc::driver::{anonymous}::GetObjectsBuilder::AppendCatalogs()' at c/driver/framework/objects.cc:134:9,
inlined from 'adbc::driver::Status adbc::driver::{anonymous}::GetObjectsBuilder::Build()' at c/driver/framework/objects.cc:110:5,
inlined from 'adbc::driver::Status adbc::driver::BuildGetObjects(GetObjectsHelper*, GetObjectsDepth, std::optional<std::basic_string_view<char> >, std::optional<std::basic_string_view<char> >, std::optional<std::basic_string_view<char> >, std::optional<std::basic_string_view<char> >, const std::vector<std::basic_string_view<char> >&, ArrowSchema*, ArrowArray*)' at c/driver/framework/objects.cc:362:14:
/usr/local/gcc14/include/c++/14.0.1/bits/stl_vector.h:388:9: warning: '((std::_Vector_base<adbc::driver::GetObjectsHelper::ConstraintUsage, std::allocator<adbc::driver::GetObjectsHelper::ConstraintUsage> >::_Vector_impl_data*)((char*)&maybe_constraint + offsetof(std::optional<adbc::driver::GetObjectsHelper::Constraint>,std::optional<adbc::driver::GetObjectsHelper::Constraint>::<unnamed>.std::_Optional_base<adbc::driver::GetObjectsHelper::Constraint, false, false>::_M_payload.std::_Optional_payload<adbc::driver::GetObjectsHelper::Constraint, false, false, false>::<unnamed>.std::_Optional_payload<adbc::driver::GetObjectsHelper::Constraint, true, false, false>::<unnamed>.std::_Optional_payload_base<adbc::driver::GetObjectsHelper::Constraint>::_M_payload) + 16))[2].std::_Vector_base<adbc::driver::GetObjectsHelper::ConstraintUsage, std::allocator<adbc::driver::GetObjectsHelper::ConstraintUsage> >::_Vector_impl_data::_M_start' may be used uninitialized [-Wmaybe-uninitialized]
388 | if (__p)
| ^~
In file included from ../src/c/driver/framework/catalog.h:30,
from ../src/c/driver/framework/objects.h:26:
c/driver/framework/objects.cc: In function 'adbc::driver::Status adbc::driver::BuildGetObjects(GetObjectsHelper*, GetObjectsDepth, std::optional<std::basic_string_view<char> >, std::optional<std::basic_string_view<char> >, std::optional<std::basic_string_view<char> >, std::optional<std::basic_string_view<char> >, const std::vector<std::basic_string_view<char> >&, ArrowSchema*, ArrowArray*)':
c/driver/framework/objects.cc:254:26: note: '((std::_Vector_base<adbc::driver::GetObjectsHelper::ConstraintUsage, std::allocator<adbc::driver::GetObjectsHelper::ConstraintUsage> >::_Vector_impl_data*)((char*)&maybe_constraint + offsetof(std::optional<adbc::driver::GetObjectsHelper::Constraint>,std::optional<adbc::driver::GetObjectsHelper::Constraint>::<unnamed>.std::_Optional_base<adbc::driver::GetObjectsHelper::Constraint, false, false>::_M_payload.std::_Optional_payload<adbc::driver::GetObjectsHelper::Constraint, false, false, false>::<unnamed>.std::_Optional_payload<adbc::driver::GetObjectsHelper::Constraint, true, false, false>::<unnamed>.std::_Optional_payload_base<adbc::driver::GetObjectsHelper::Constraint>::_M_payload) + 16))[2].std::_Vector_base<adbc::driver::GetObjectsHelper::ConstraintUsage, std::allocator<adbc::driver::GetObjectsHelper::ConstraintUsage> >::_Vector_impl_data::_M_start' was declared here
254 | UNWRAP_RESULT(auto maybe_constraint, helper->NextConstraint());
| ^~~~~~~~~~~~~~~~
../src/c/driver/framework/status.h:223:3: note: in definition of macro 'UNWRAP_RESULT_IMPL'
223 | lhs = std::move((name).value());
| ^~~
c/driver/framework/objects.cc:254:7: note: in expansion of macro 'UNWRAP_RESULT'
254 | UNWRAP_RESULT(auto maybe_constraint, helper->NextConstraint());
| ^~~~~~~~~~~~~
In destructor 'std::_Vector_base<_Tp, _Alloc>::~_Vector_base() [with _Tp = adbc::driver::GetObjectsHelper::ConstraintUsage; _Alloc = std::allocator<adbc::driver::GetObjectsHelper::ConstraintUsage>]',
inlined from 'std::vector<_Tp, _Alloc>::~vector() [with _Tp = adbc::driver::GetObjectsHelper::ConstraintUsage; _Alloc = std::allocator<adbc::driver::GetObjectsHelper::ConstraintUsage>]' at /usr/local/gcc14/include/c++/14.0.1/bits/stl_vector.h:738:7,
inlined from 'constexpr void std::_Optional_payload_base<_Tp>::_M_destroy() [with _Tp = std::vector<adbc::driver::GetObjectsHelper::ConstraintUsage>]' at /usr/local/gcc14/include/c++/14.0.1/optional:283:35,
inlined from 'constexpr void std::_Optional_payload_base<_Tp>::_M_reset() [with _Tp = std::vector<adbc::driver::GetObjectsHelper::ConstraintUsage>]' at /usr/local/gcc14/include/c++/14.0.1/optional:314:14,
inlined from 'std::_Optional_payload<_Tp, false, _Copy, _Move>::~_Optional_payload() [with _Tp = std::vector<adbc::driver::GetObjectsHelper::ConstraintUsage>; bool _Copy = false; bool _Move = false]' at /usr/local/gcc14/include/c++/14.0.1/optional:437:65,
inlined from 'std::_Optional_base<std::vector<adbc::driver::GetObjectsHelper::ConstraintUsage>, false, false>::~_Optional_base()' at /usr/local/gcc14/include/c++/14.0.1/optional:508:12,
inlined from 'std::optional<std::vector<adbc::driver::GetObjectsHelper::ConstraintUsage> >::~optional()' at /usr/local/gcc14/include/c++/14.0.1/optional:703:11,
inlined from 'adbc::driver::GetObjectsHelper::Constraint::~Constraint()' at ../src/c/driver/framework/catalog.h:89:10,
inlined from 'constexpr void std::_Optional_payload_base<_Tp>::_M_destroy() [with _Tp = adbc::driver::GetObjectsHelper::Constraint]' at /usr/local/gcc14/include/c++/14.0.1/optional:283:35,
inlined from 'constexpr void std::_Optional_payload_base<_Tp>::_M_reset() [with _Tp = adbc::driver::GetObjectsHelper::Constraint]' at /usr/local/gcc14/include/c++/14.0.1/optional:314:14,
inlined from 'std::_Optional_payload<_Tp, false, _Copy, _Move>::~_Optional_payload() [with _Tp = adbc::driver::GetObjectsHelper::Constraint; bool _Copy = false; bool _Move = false]' at /usr/local/gcc14/include/c++/14.0.1/optional:437:65,
inlined from 'std::_Optional_base<adbc::driver::GetObjectsHelper::Constraint, false, false>::~_Optional_base()' at /usr/local/gcc14/include/c++/14.0.1/optional:508:12,
inlined from 'std::optional<adbc::driver::GetObjectsHelper::Constraint>::~optional()' at /usr/local/gcc14/include/c++/14.0.1/optional:703:11,
inlined from 'adbc::driver::Status adbc::driver::{anonymous}::GetObjectsBuilder::AppendConstraints(std::string_view, std::string_view, std::string_view)' at c/driver/framework/objects.cc:303:5,
inlined from 'adbc::driver::Status adbc::driver::{anonymous}::GetObjectsBuilder::AppendTables(std::string_view, std::string_view)' at c/driver/framework/objects.cc:177:9,
inlined from 'adbc::driver::Status adbc::driver::{anonymous}::GetObjectsBuilder::AppendSchemas(std::string_view)' at c/driver/framework/objects.cc:153:9,
inlined from 'adbc::driver::Status adbc::driver::{anonymous}::GetObjectsBuilder::AppendCatalogs()' at c/driver/framework/objects.cc:134:9,
inlined from 'adbc::driver::Status adbc::driver::{anonymous}::GetObjectsBuilder::Build()' at c/driver/framework/objects.cc:110:5,
inlined from 'adbc::driver::Status adbc::driver::BuildGetObjects(GetObjectsHelper*, GetObjectsDepth, std::optional<std::basic_string_view<char> >, std::optional<std::basic_string_view<char> >, std::optional<std::basic_string_view<char> >, std::optional<std::basic_string_view<char> >, const std::vector<std::basic_string_view<char> >&, ArrowSchema*, ArrowArray*)' at c/driver/framework/objects.cc:362:14:
/usr/local/gcc14/include/c++/14.0.1/bits/stl_vector.h:369:49: warning: '((std::_Vector_base<adbc::driver::GetObjectsHelper::ConstraintUsage, std::allocator<adbc::driver::GetObjectsHelper::ConstraintUsage> >::_Vector_impl_data*)((char*)&maybe_constraint + offsetof(std::optional<adbc::driver::GetObjectsHelper::Constraint>,std::optional<adbc::driver::GetObjectsHelper::Constraint>::<unnamed>.std::_Optional_base<adbc::driver::GetObjectsHelper::Constraint, false, false>::_M_payload.std::_Optional_payload<adbc::driver::GetObjectsHelper::Constraint, false, false, false>::<unnamed>.std::_Optional_payload<adbc::driver::GetObjectsHelper::Constraint, true, false, false>::<unnamed>.std::_Optional_payload_base<adbc::driver::GetObjectsHelper::Constraint>::_M_payload) + 16))[2].std::_Vector_base<adbc::driver::GetObjectsHelper::ConstraintUsage, std::allocator<adbc::driver::GetObjectsHelper::ConstraintUsage> >::_Vector_impl_data::_M_end_of_storage' may be used uninitialized [-Wmaybe-uninitialized]
369 | _M_impl._M_end_of_storage - _M_impl._M_start);
| ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~
c/driver/framework/objects.cc: In function 'adbc::driver::Status adbc::driver::BuildGetObjects(GetObjectsHelper*, GetObjectsDepth, std::optional<std::basic_string_view<char> >, std::optional<std::basic_string_view<char> >, std::optional<std::basic_string_view<char> >, std::optional<std::basic_string_view<char> >, const std::vector<std::basic_string_view<char> >&, ArrowSchema*, ArrowArray*)':
c/driver/framework/objects.cc:254:26: note: '((std::_Vector_base<adbc::driver::GetObjectsHelper::ConstraintUsage, std::allocator<adbc::driver::GetObjectsHelper::ConstraintUsage> >::_Vector_impl_data*)((char*)&maybe_constraint + offsetof(std::optional<adbc::driver::GetObjectsHelper::Constraint>,std::optional<adbc::driver::GetObjectsHelper::Constraint>::<unnamed>.std::_Optional_base<adbc::driver::GetObjectsHelper::Constraint, false, false>::_M_payload.std::_Optional_payload<adbc::driver::GetObjectsHelper::Constraint, false, false, false>::<unnamed>.std::_Optional_payload<adbc::driver::GetObjectsHelper::Constraint, true, false, false>::<unnamed>.std::_Optional_payload_base<adbc::driver::GetObjectsHelper::Constraint>::_M_payload) + 16))[2].std::_Vector_base<adbc::driver::GetObjectsHelper::ConstraintUsage, std::allocator<adbc::driver::GetObjectsHelper::ConstraintUsage> >::_Vector_impl_data::_M_end_of_storage' was declared here
254 | UNWRAP_RESULT(auto maybe_constraint, helper->NextConstraint());
| ^~~~~~~~~~~~~~~~
../src/c/driver/framework/status.h:223:3: note: in definition of macro 'UNWRAP_RESULT_IMPL'
223 | lhs = std::move((name).value());
| ^~~
c/driver/framework/objects.cc:254:7: note: in expansion of macro 'UNWRAP_RESULT'
254 | UNWRAP_RESULT(auto maybe_constraint, helper->NextConstraint());
| ^~~~~~~~~~~~~
g++-14 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I../src/ -I../src/c/ -I../src/c/vendor/ -I../src/c/vendor/fmt/include/ -DADBC_EXPORT="" -DFMT_HEADER_ONLY=1 -D_LIBCPP_DISABLE_AVAILABILITY -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c c/driver/sqlite/sqlite.cc -o c/driver/sqlite/sqlite.o
gcc-14 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I../src/ -I../src/c/ -I../src/c/vendor/ -I../src/c/vendor/fmt/include/ -DADBC_EXPORT="" -DFMT_HEADER_ONLY=1 -D_LIBCPP_DISABLE_AVAILABILITY -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c c/driver/sqlite/statement_reader.c -o c/driver/sqlite/statement_reader.o
gcc-14 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I../src/ -I../src/c/ -I../src/c/vendor/ -I../src/c/vendor/fmt/include/ -DADBC_EXPORT="" -DFMT_HEADER_ONLY=1 -D_LIBCPP_DISABLE_AVAILABILITY -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c c/vendor/nanoarrow/nanoarrow.c -o c/vendor/nanoarrow/nanoarrow.o
gcc-14 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I../src/ -I../src/c/ -I../src/c/vendor/ -I../src/c/vendor/fmt/include/ -DADBC_EXPORT="" -DFMT_HEADER_ONLY=1 -D_LIBCPP_DISABLE_AVAILABILITY -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c c/vendor/sqlite3/sqlite3.c -o c/vendor/sqlite3/sqlite3.o
g++-14 -std=gnu++17 -shared -L/usr/local/gcc14/lib64 -L/usr/local/lib64 -o adbcsqlite.so init.o c/driver/common/utils.o c/driver/framework/base_driver.o c/driver/framework/catalog.o c/driver/framework/objects.o c/driver/sqlite/sqlite.o c/driver/sqlite/statement_reader.o c/vendor/nanoarrow/nanoarrow.o c/vendor/sqlite3/sqlite3.o -lsqlite3
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/adbcsqlite/src'
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/adbcsqlite/src'
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/adbcsqlite/src'
installing to /data/gannet/ripley/R/packages/tests-devel/adbcsqlite.Rcheck/00LOCK-adbcsqlite/00new/adbcsqlite/libs
** R
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (adbcsqlite)