* installing *source* package ‘SBMTrees’ ...
** this is package ‘SBMTrees’ version ‘1.5’
** package ‘SBMTrees’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C++ compiler: ‘g++ (GCC) 15.2.1 20260123 (Red Hat 15.2.1-7)’
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/SBMTrees/src'
g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I/data/gannet/ripley/R/R-devel/include -I../inst/include/ -I/data/gannet/ripley/R/R-devel/include/Rcpp -I/data/gannet/ripley/R/R-devel/include/RcppArmadillo -I/data/gannet/ripley/R/R-devel/include/RcppDist -I/data/gannet/ripley/R/R-devel/include/RcppProgress -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/RcppArmadillo/include' -I'/data/gannet/ripley/R/test-dev/RcppDist/include' -I'/data/gannet/ripley/R/test-dev/RcppProgress/include' -I'/data/gannet/ripley/R/test-dev/pg/include' -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection   -c RcppExports.cpp -o RcppExports.o
g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I/data/gannet/ripley/R/R-devel/include -I../inst/include/ -I/data/gannet/ripley/R/R-devel/include/Rcpp -I/data/gannet/ripley/R/R-devel/include/RcppArmadillo -I/data/gannet/ripley/R/R-devel/include/RcppDist -I/data/gannet/ripley/R/R-devel/include/RcppProgress -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/RcppArmadillo/include' -I'/data/gannet/ripley/R/test-dev/RcppDist/include' -I'/data/gannet/ripley/R/test-dev/RcppProgress/include' -I'/data/gannet/ripley/R/test-dev/pg/include' -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection   -c sequential_imputation.cpp -o sequential_imputation.o
In file included from bart_model.h:42,
                 from bmtrees.h:44,
                 from sequential_imputation.cpp:23:
BART/bartfuns.h: In function ‘double getpb(tree&, xinfo&, pinfo&, tree::npv&)’:
BART/bartfuns.h:75:3: warning: this ‘for’ clause does not guard... [-Wmisleading-indentation]
   75 |   for(size_t i=0;i!=bnv.size();i++)
      |   ^~~
BART/bartfuns.h:77:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘for’
   77 |     if(goodbots.size()==0) { //are there any bottom nodes you can split on?
      |     ^~
In file included from bart_model.h:43:
BART/bd.h: In function ‘double getpb_bd(tree&, xinfo&, pinfo&, tree::npv&)’:
BART/bd.h:294:3: warning: this ‘for’ clause does not guard... [-Wmisleading-indentation]
  294 |   for(size_t i=0;i!=bnv.size();i++)
      |   ^~~
BART/bd.h:296:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘for’
  296 |     if(goodbots.size()==0) { //are there any bottom nodes you can split on?
      |     ^~
In file included from bart_model.h:44:
BART/bart.h: In member function ‘void bart::makexinfo_bart(size_t, size_t, double*, xinfo&, int*)’:
BART/bart.h:101:24: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
  101 |        for(size_t j=0;j<nc[i];j++) xi[i][j] = minx[i] + (j+1)*xinc;
      |                       ~^~~~~~
bart_model.h: In constructor ‘bart_model::bart_model(Rcpp::NumericMatrix, Rcpp::NumericVector, long int, bool, bool, bool, int, Rcpp::Nullable<double>, double, double, double, double)’:
bart_model.h:303:23: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘long int’ [-Wsign-compare]
  303 |       for(size_t i=0;i<p;i++) {
      |                      ~^~
bart_model.h: In member function ‘Rcpp::List bart_model::update(double, long int, long int, int, bool, long int)’:
bart_model.h:343:23: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘long int’ [-Wsign-compare]
  343 |     for(size_t i=0; i < nburn + npost; i++) {
      |                     ~~^~~~~~~~~~~~~~~
bart_model.h:353:24: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘long int’ [-Wsign-compare]
  353 |       for(size_t k=0; k<n; k++) {
      |                       ~^~
bart_model.h:359:11: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘long int’ [-Wsign-compare]
  359 |       if(i>=nburn) {
      |          ~^~~~~~~
bart_model.h:360:26: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘long int’ [-Wsign-compare]
  360 |         for(size_t k=0; k<n; k++) trmean[k]+=bm.f(k);
      |                         ~^~
bart_model.h:365:28: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘long int’ [-Wsign-compare]
  365 |           for(size_t k=0; k<n; k++) TRDRAW(trcnt,k)=bm.f(k);
      |                           ~^~
bart_model.h:368:28: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘long int’ [-Wsign-compare]
  368 |           for(size_t j=0; j<ntrees; j++) {
      |                           ~^~~~~~~
bart_model.h:376:28: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘long int’ [-Wsign-compare]
  376 |           for(size_t j=0; j<p; j++){
      |                           ~^~
bart_model.h:388:22: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘long int’ [-Wsign-compare]
  388 |     for(size_t k=0; k<n; k++) trmean[k] /= npost;
      |                     ~^~
g++ -std=gnu++20 -shared -L/usr/local/lib64 -o SBMTrees.so RcppExports.o sequential_imputation.o -llapack -L/data/gannet/ripley/R/R-devel/lib -lRblas -lgfortran -lm -lquadmath -L/data/gannet/ripley/R/R-devel/lib
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/SBMTrees/src'
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/SBMTrees/src'
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/SBMTrees/src'
installing to /data/gannet/ripley/R/packages/tests-devel/SBMTrees.Rcheck/00LOCK-SBMTrees/00new/SBMTrees/libs
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (SBMTrees)