* installing *source* package ‘RoBMA’ ... ** this is package ‘RoBMA’ version ‘4.0.0’ ** package ‘RoBMA’ successfully unpacked and MD5 sums checked ** using staged installation checking for pkg-config... /usr/bin/pkg-config configure: Setting compile and link flags according to pkg-config configure: Compile flags are -I/usr/local/include/JAGS configure: Link flags are -L/usr/local/lib64 -ljags checking for gcc... gcc checking whether the compiler supports GNU C... no checking whether gcc accepts -g... no checking for gcc option to enable C11 features... unsupported checking for gcc option to enable C99 features... unsupported checking for gcc option to enable C89 features... unsupported checking for jags_version in -ljags... yes configure: creating ./config.status config.status: creating src/Makevars ** libs using C compiler: ‘gcc (GCC) 15.2.1 20260123 (Red Hat 15.2.1-7)’ using C++ compiler: ‘g++ (GCC) 15.2.1 20260123 (Red Hat 15.2.1-7)’ make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/RoBMA/src' g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I/usr/local/include/JAGS -D JAGS_MAJOR_FORCED=0 -D JAGS_MAJOR_ASSUMED=0 -DR_NO_REMAP -I'/data/gannet/ripley/R/test-dev/mvtnorm/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c distributions/DWN.cc -o distributions/DWN.o g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I/usr/local/include/JAGS -D JAGS_MAJOR_FORCED=0 -D JAGS_MAJOR_ASSUMED=0 -DR_NO_REMAP -I'/data/gannet/ripley/R/test-dev/mvtnorm/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c distributions/DWB.cc -o distributions/DWB.o g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I/usr/local/include/JAGS -D JAGS_MAJOR_FORCED=0 -D JAGS_MAJOR_ASSUMED=0 -DR_NO_REMAP -I'/data/gannet/ripley/R/test-dev/mvtnorm/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c distributions/DWP.cc -o distributions/DWP.o g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I/usr/local/include/JAGS -D JAGS_MAJOR_FORCED=0 -D JAGS_MAJOR_ASSUMED=0 -DR_NO_REMAP -I'/data/gannet/ripley/R/test-dev/mvtnorm/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c distributions/DSELNORMSTEP.cc -o distributions/DSELNORMSTEP.o g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I/usr/local/include/JAGS -D JAGS_MAJOR_FORCED=0 -D JAGS_MAJOR_ASSUMED=0 -DR_NO_REMAP -I'/data/gannet/ripley/R/test-dev/mvtnorm/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c distributions/DSELNORMSTEPSWITCH.cc -o distributions/DSELNORMSTEPSWITCH.o g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I/usr/local/include/JAGS -D JAGS_MAJOR_FORCED=0 -D JAGS_MAJOR_ASSUMED=0 -DR_NO_REMAP -I'/data/gannet/ripley/R/test-dev/mvtnorm/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c distributions/DSELNORMKERNEL.cc -o distributions/DSELNORMKERNEL.o g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I/usr/local/include/JAGS -D JAGS_MAJOR_FORCED=0 -D JAGS_MAJOR_ASSUMED=0 -DR_NO_REMAP -I'/data/gannet/ripley/R/test-dev/mvtnorm/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c selnorm/selnorm.cc -o selnorm/selnorm.o g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I/usr/local/include/JAGS -D JAGS_MAJOR_FORCED=0 -D JAGS_MAJOR_ASSUMED=0 -DR_NO_REMAP -I'/data/gannet/ripley/R/test-dev/mvtnorm/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c r-glmm.cc -o r-glmm.o g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I/usr/local/include/JAGS -D JAGS_MAJOR_FORCED=0 -D JAGS_MAJOR_ASSUMED=0 -DR_NO_REMAP -I'/data/gannet/ripley/R/test-dev/mvtnorm/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c r-regplot.cc -o r-regplot.o g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I/usr/local/include/JAGS -D JAGS_MAJOR_FORCED=0 -D JAGS_MAJOR_ASSUMED=0 -DR_NO_REMAP -I'/data/gannet/ripley/R/test-dev/mvtnorm/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c r-selnorm.cc -o r-selnorm.o gcc -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I/usr/local/include/JAGS -D JAGS_MAJOR_FORCED=0 -D JAGS_MAJOR_ASSUMED=0 -DR_NO_REMAP -I'/data/gannet/ripley/R/test-dev/mvtnorm/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c init.c -o init.o g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I/usr/local/include/JAGS -D JAGS_MAJOR_FORCED=0 -D JAGS_MAJOR_ASSUMED=0 -DR_NO_REMAP -I'/data/gannet/ripley/R/test-dev/mvtnorm/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c RoBMA.cc -o RoBMA.o g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I/usr/local/include/JAGS -D JAGS_MAJOR_FORCED=0 -D JAGS_MAJOR_ASSUMED=0 -DR_NO_REMAP -I'/data/gannet/ripley/R/test-dev/mvtnorm/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c testRoBMA.cc -o testRoBMA.o g++ -std=gnu++20 -shared -L/usr/local/lib64 -o RoBMA.so distributions/DWN.o distributions/DWB.o distributions/DWP.o distributions/DSELNORMSTEP.o distributions/DSELNORMSTEPSWITCH.o distributions/DSELNORMKERNEL.o selnorm/selnorm.o r-glmm.o r-regplot.o r-selnorm.o init.o RoBMA.o testRoBMA.o -L/usr/local/lib64 -ljags -ljrmath -llapack -L/data/gannet/ripley/R/R-devel/lib -lRblas -lgfortran -lm -lquadmath make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/RoBMA/src' make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/RoBMA/src' make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/RoBMA/src' installing to /data/gannet/ripley/R/packages/tests-devel/RoBMA.Rcheck/00LOCK-RoBMA/00new/RoBMA/libs ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (RoBMA)