* installing *source* package ‘Rlinsolve’ ...
** package ‘Rlinsolve’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C++ compiler: ‘g++-14 (GCC) 14.1.0’
using C++11
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/Rlinsolve/src'
g++-14 -std=gnu++11 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/RcppArmadillo/include' -I/usr/local/include   -fopenmp  -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection   -c RcppExports.cpp -o RcppExports.o
g++-14 -std=gnu++11 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/RcppArmadillo/include' -I/usr/local/include   -fopenmp  -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection   -c krylov_bicg.cpp -o krylov_bicg.o
g++-14 -std=gnu++11 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/RcppArmadillo/include' -I/usr/local/include   -fopenmp  -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection   -c krylov_bicgstab.cpp -o krylov_bicgstab.o
g++-14 -std=gnu++11 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/RcppArmadillo/include' -I/usr/local/include   -fopenmp  -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection   -c krylov_cg.cpp -o krylov_cg.o
In file included from /data/gannet/ripley/R/test-dev/RcppArmadillo/include/armadillo:26,
                 from /data/gannet/ripley/R/test-dev/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:57,
                 from /data/gannet/ripley/R/test-dev/RcppArmadillo/include/RcppArmadillo.h:29,
                 from krylov_bicg.cpp:2:
/data/gannet/ripley/R/test-dev/RcppArmadillo/include/armadillo_bits/config.hpp:326:86: note: '#pragma message: INFO: support for ARMA_DONT_PRINT_ERRORS option has been removed'
  326 |   #pragma message ("INFO: support for ARMA_DONT_PRINT_ERRORS option has been removed")
      |                                                                                      ^
/data/gannet/ripley/R/test-dev/RcppArmadillo/include/armadillo_bits/config.hpp:331:75: note: '#pragma message: INFO: suggest to use ARMA_WARN_LEVEL option instead'
  331 |     #pragma message ("INFO: suggest to use ARMA_WARN_LEVEL option instead")
      |                                                                           ^
/data/gannet/ripley/R/test-dev/RcppArmadillo/include/armadillo_bits/config.hpp:334:61: note: '#pragma message: INFO: see the documentation for details'
  334 |   #pragma message ("INFO: see the documentation for details")
      |                                                             ^
In file included from /data/gannet/ripley/R/test-dev/RcppArmadillo/include/armadillo:26,
                 from /data/gannet/ripley/R/test-dev/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:57,
                 from /data/gannet/ripley/R/test-dev/RcppArmadillo/include/RcppArmadillo.h:29,
                 from krylov_bicgstab.cpp:2:
/data/gannet/ripley/R/test-dev/RcppArmadillo/include/armadillo_bits/config.hpp:326:86: note: '#pragma message: INFO: support for ARMA_DONT_PRINT_ERRORS option has been removed'
  326 |   #pragma message ("INFO: support for ARMA_DONT_PRINT_ERRORS option has been removed")
      |                                                                                      ^
/data/gannet/ripley/R/test-dev/RcppArmadillo/include/armadillo_bits/config.hpp:331:75: note: '#pragma message: INFO: suggest to use ARMA_WARN_LEVEL option instead'
  331 |     #pragma message ("INFO: suggest to use ARMA_WARN_LEVEL option instead")
      |                                                                           ^
/data/gannet/ripley/R/test-dev/RcppArmadillo/include/armadillo_bits/config.hpp:334:61: note: '#pragma message: INFO: see the documentation for details'
  334 |   #pragma message ("INFO: see the documentation for details")
      |                                                             ^
krylov_bicgstab.cpp: In function 'Rcpp::List single_bicgstab(const arma::mat&, const arma::colvec&, arma::colvec&, double, int, const arma::mat&)':
krylov_bicgstab.cpp:45:10: warning: variable 'resid' set but not used [-Wunused-but-set-variable]
   45 |   double resid = 0;
      |          ^~~~~
krylov_bicgstab.cpp: In function 'Rcpp::List single_bicgstab_sparse(arma::sp_mat, arma::sp_mat, arma::colvec&, double, int, arma::sp_mat)':
krylov_bicgstab.cpp:162:10: warning: variable 'resid' set but not used [-Wunused-but-set-variable]
  162 |   double resid = 0;
      |          ^~~~~
g++-14 -std=gnu++11 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/RcppArmadillo/include' -I/usr/local/include   -fopenmp  -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection   -c krylov_cgs.cpp -o krylov_cgs.o
g++-14 -std=gnu++11 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/RcppArmadillo/include' -I/usr/local/include   -fopenmp  -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection   -c krylov_cheby.cpp -o krylov_cheby.o
In file included from /data/gannet/ripley/R/test-dev/RcppArmadillo/include/armadillo:26,
                 from /data/gannet/ripley/R/test-dev/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:57,
                 from /data/gannet/ripley/R/test-dev/RcppArmadillo/include/RcppArmadillo.h:29,
                 from krylov_cgs.cpp:2:
/data/gannet/ripley/R/test-dev/RcppArmadillo/include/armadillo_bits/config.hpp:326:86: note: '#pragma message: INFO: support for ARMA_DONT_PRINT_ERRORS option has been removed'
  326 |   #pragma message ("INFO: support for ARMA_DONT_PRINT_ERRORS option has been removed")
      |                                                                                      ^
/data/gannet/ripley/R/test-dev/RcppArmadillo/include/armadillo_bits/config.hpp:331:75: note: '#pragma message: INFO: suggest to use ARMA_WARN_LEVEL option instead'
  331 |     #pragma message ("INFO: suggest to use ARMA_WARN_LEVEL option instead")
      |                                                                           ^
/data/gannet/ripley/R/test-dev/RcppArmadillo/include/armadillo_bits/config.hpp:334:61: note: '#pragma message: INFO: see the documentation for details'
  334 |   #pragma message ("INFO: see the documentation for details")
      |                                                             ^
In file included from /data/gannet/ripley/R/test-dev/RcppArmadillo/include/armadillo:26,
                 from /data/gannet/ripley/R/test-dev/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:57,
                 from /data/gannet/ripley/R/test-dev/RcppArmadillo/include/RcppArmadillo.h:29,
                 from krylov_cheby.cpp:2:
/data/gannet/ripley/R/test-dev/RcppArmadillo/include/armadillo_bits/config.hpp:326:86: note: '#pragma message: INFO: support for ARMA_DONT_PRINT_ERRORS option has been removed'
  326 |   #pragma message ("INFO: support for ARMA_DONT_PRINT_ERRORS option has been removed")
      |                                                                                      ^
/data/gannet/ripley/R/test-dev/RcppArmadillo/include/armadillo_bits/config.hpp:331:75: note: '#pragma message: INFO: suggest to use ARMA_WARN_LEVEL option instead'
  331 |     #pragma message ("INFO: suggest to use ARMA_WARN_LEVEL option instead")
      |                                                                           ^
/data/gannet/ripley/R/test-dev/RcppArmadillo/include/armadillo_bits/config.hpp:334:61: note: '#pragma message: INFO: see the documentation for details'
  334 |   #pragma message ("INFO: see the documentation for details")
      |                                                             ^
g++-14 -std=gnu++11 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/RcppArmadillo/include' -I/usr/local/include   -fopenmp  -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection   -c krylov_gmres.cpp -o krylov_gmres.o
g++-14 -std=gnu++11 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/RcppArmadillo/include' -I/usr/local/include   -fopenmp  -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection   -c krylov_qmr.cpp -o krylov_qmr.o
g++-14 -std=gnu++11 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/RcppArmadillo/include' -I/usr/local/include   -fopenmp  -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection   -c method_gs.cpp -o method_gs.o
In file included from /data/gannet/ripley/R/test-dev/RcppArmadillo/include/armadillo:26,
                 from /data/gannet/ripley/R/test-dev/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:57,
                 from /data/gannet/ripley/R/test-dev/RcppArmadillo/include/RcppArmadillo.h:29,
                 from krylov_gmres.cpp:2:
/data/gannet/ripley/R/test-dev/RcppArmadillo/include/armadillo_bits/config.hpp:326:86: note: '#pragma message: INFO: support for ARMA_DONT_PRINT_ERRORS option has been removed'
  326 |   #pragma message ("INFO: support for ARMA_DONT_PRINT_ERRORS option has been removed")
      |                                                                                      ^
/data/gannet/ripley/R/test-dev/RcppArmadillo/include/armadillo_bits/config.hpp:331:75: note: '#pragma message: INFO: suggest to use ARMA_WARN_LEVEL option instead'
  331 |     #pragma message ("INFO: suggest to use ARMA_WARN_LEVEL option instead")
      |                                                                           ^
/data/gannet/ripley/R/test-dev/RcppArmadillo/include/armadillo_bits/config.hpp:334:61: note: '#pragma message: INFO: see the documentation for details'
  334 |   #pragma message ("INFO: see the documentation for details")
      |                                                             ^
In file included from /data/gannet/ripley/R/test-dev/RcppArmadillo/include/armadillo:26,
                 from /data/gannet/ripley/R/test-dev/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:57,
                 from /data/gannet/ripley/R/test-dev/RcppArmadillo/include/RcppArmadillo.h:29,
                 from krylov_qmr.cpp:2:
/data/gannet/ripley/R/test-dev/RcppArmadillo/include/armadillo_bits/config.hpp:326:86: note: '#pragma message: INFO: support for ARMA_DONT_PRINT_ERRORS option has been removed'
  326 |   #pragma message ("INFO: support for ARMA_DONT_PRINT_ERRORS option has been removed")
      |                                                                                      ^
/data/gannet/ripley/R/test-dev/RcppArmadillo/include/armadillo_bits/config.hpp:331:75: note: '#pragma message: INFO: suggest to use ARMA_WARN_LEVEL option instead'
  331 |     #pragma message ("INFO: suggest to use ARMA_WARN_LEVEL option instead")
      |                                                                           ^
/data/gannet/ripley/R/test-dev/RcppArmadillo/include/armadillo_bits/config.hpp:334:61: note: '#pragma message: INFO: see the documentation for details'
  334 |   #pragma message ("INFO: see the documentation for details")
      |                                                             ^
In file included from /data/gannet/ripley/R/test-dev/RcppArmadillo/include/armadillo:26,
                 from /data/gannet/ripley/R/test-dev/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:57,
                 from /data/gannet/ripley/R/test-dev/RcppArmadillo/include/RcppArmadillo.h:29,
                 from method_gs.cpp:2:
/data/gannet/ripley/R/test-dev/RcppArmadillo/include/armadillo_bits/config.hpp:326:86: note: '#pragma message: INFO: support for ARMA_DONT_PRINT_ERRORS option has been removed'
  326 |   #pragma message ("INFO: support for ARMA_DONT_PRINT_ERRORS option has been removed")
      |                                                                                      ^
/data/gannet/ripley/R/test-dev/RcppArmadillo/include/armadillo_bits/config.hpp:331:75: note: '#pragma message: INFO: suggest to use ARMA_WARN_LEVEL option instead'
  331 |     #pragma message ("INFO: suggest to use ARMA_WARN_LEVEL option instead")
      |                                                                           ^
/data/gannet/ripley/R/test-dev/RcppArmadillo/include/armadillo_bits/config.hpp:334:61: note: '#pragma message: INFO: see the documentation for details'
  334 |   #pragma message ("INFO: see the documentation for details")
      |                                                             ^
g++-14 -std=gnu++11 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/RcppArmadillo/include' -I/usr/local/include   -fopenmp  -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection   -c method_jacobi.cpp -o method_jacobi.o
g++-14 -std=gnu++11 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/RcppArmadillo/include' -I/usr/local/include   -fopenmp  -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection   -c method_sor.cpp -o method_sor.o
g++-14 -std=gnu++11 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/RcppArmadillo/include' -I/usr/local/include   -fopenmp  -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection   -c method_ssor.cpp -o method_ssor.o
In file included from /data/gannet/ripley/R/test-dev/RcppArmadillo/include/armadillo:26,
                 from /data/gannet/ripley/R/test-dev/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:57,
                 from /data/gannet/ripley/R/test-dev/RcppArmadillo/include/RcppArmadillo.h:29,
                 from method_jacobi.cpp:2:
/data/gannet/ripley/R/test-dev/RcppArmadillo/include/armadillo_bits/config.hpp:326:86: note: '#pragma message: INFO: support for ARMA_DONT_PRINT_ERRORS option has been removed'
  326 |   #pragma message ("INFO: support for ARMA_DONT_PRINT_ERRORS option has been removed")
      |                                                                                      ^
/data/gannet/ripley/R/test-dev/RcppArmadillo/include/armadillo_bits/config.hpp:331:75: note: '#pragma message: INFO: suggest to use ARMA_WARN_LEVEL option instead'
  331 |     #pragma message ("INFO: suggest to use ARMA_WARN_LEVEL option instead")
      |                                                                           ^
/data/gannet/ripley/R/test-dev/RcppArmadillo/include/armadillo_bits/config.hpp:334:61: note: '#pragma message: INFO: see the documentation for details'
  334 |   #pragma message ("INFO: see the documentation for details")
      |                                                             ^
In file included from /data/gannet/ripley/R/test-dev/RcppArmadillo/include/armadillo:26,
                 from /data/gannet/ripley/R/test-dev/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:57,
                 from /data/gannet/ripley/R/test-dev/RcppArmadillo/include/RcppArmadillo.h:29,
                 from method_sor.cpp:2:
/data/gannet/ripley/R/test-dev/RcppArmadillo/include/armadillo_bits/config.hpp:326:86: note: '#pragma message: INFO: support for ARMA_DONT_PRINT_ERRORS option has been removed'
  326 |   #pragma message ("INFO: support for ARMA_DONT_PRINT_ERRORS option has been removed")
      |                                                                                      ^
/data/gannet/ripley/R/test-dev/RcppArmadillo/include/armadillo_bits/config.hpp:331:75: note: '#pragma message: INFO: suggest to use ARMA_WARN_LEVEL option instead'
  331 |     #pragma message ("INFO: suggest to use ARMA_WARN_LEVEL option instead")
      |                                                                           ^
/data/gannet/ripley/R/test-dev/RcppArmadillo/include/armadillo_bits/config.hpp:334:61: note: '#pragma message: INFO: see the documentation for details'
  334 |   #pragma message ("INFO: see the documentation for details")
      |                                                             ^
In file included from /data/gannet/ripley/R/test-dev/RcppArmadillo/include/armadillo:26,
                 from /data/gannet/ripley/R/test-dev/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:57,
                 from /data/gannet/ripley/R/test-dev/RcppArmadillo/include/RcppArmadillo.h:29,
                 from method_ssor.cpp:2:
/data/gannet/ripley/R/test-dev/RcppArmadillo/include/armadillo_bits/config.hpp:326:86: note: '#pragma message: INFO: support for ARMA_DONT_PRINT_ERRORS option has been removed'
  326 |   #pragma message ("INFO: support for ARMA_DONT_PRINT_ERRORS option has been removed")
      |                                                                                      ^
/data/gannet/ripley/R/test-dev/RcppArmadillo/include/armadillo_bits/config.hpp:331:75: note: '#pragma message: INFO: suggest to use ARMA_WARN_LEVEL option instead'
  331 |     #pragma message ("INFO: suggest to use ARMA_WARN_LEVEL option instead")
      |                                                                           ^
/data/gannet/ripley/R/test-dev/RcppArmadillo/include/armadillo_bits/config.hpp:334:61: note: '#pragma message: INFO: see the documentation for details'
  334 |   #pragma message ("INFO: see the documentation for details")
      |                                                             ^
krylov_qmr.cpp: In function 'Rcpp::List single_qmr(const arma::mat&, const arma::colvec&, arma::colvec&, double, int, const arma::mat&)':
krylov_qmr.cpp:72:10: warning: unused variable 'beta_1' [-Wunused-variable]
   72 |   double beta_1 =0.0;
      |          ^~~~~~
krylov_qmr.cpp: In function 'Rcpp::List single_qmr_sparse(arma::sp_mat, arma::sp_mat, arma::colvec&, double, int, arma::sp_mat, arma::sp_mat, arma::sp_mat)':
krylov_qmr.cpp:250:10: warning: unused variable 'beta_1' [-Wunused-variable]
  250 |   double beta_1 =0.0;
      |          ^~~~~~
g++-14 -std=gnu++11 -shared -L/usr/local/gcc14/lib64 -L/usr/local/lib64 -o Rlinsolve.so RcppExports.o krylov_bicg.o krylov_bicgstab.o krylov_cg.o krylov_cgs.o krylov_cheby.o krylov_gmres.o krylov_qmr.o method_gs.o method_jacobi.o method_sor.o method_ssor.o -fopenmp -llapack -L/data/gannet/ripley/R/R-devel/lib -lRblas -lgfortran -lm -lquadmath
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/Rlinsolve/src'
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/Rlinsolve/src'
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/Rlinsolve/src'
installing to /data/gannet/ripley/R/packages/tests-devel/Rlinsolve.Rcheck/00LOCK-Rlinsolve/00new/Rlinsolve/libs
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (Rlinsolve)