* installing *source* package ‘RcppLbfgsBlaze’ ...
** this is package ‘RcppLbfgsBlaze’ version ‘0.1.0’
** package ‘RcppLbfgsBlaze’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C compiler: ‘gcc (GCC) 15.1.1 20250521 (Red Hat 15.1.1-2)’
using C++ compiler: ‘g++ (GCC) 15.1.1 20250521 (Red Hat 15.1.1-2)’
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/RcppLbfgsBlaze/src'
g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/RcppBlaze/include' -I/usr/local/include -I../inst/include -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c RcppExports.cpp -o RcppExports.o
g++ -std=gnu++20 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/RcppBlaze/include' -I/usr/local/include -I../inst/include -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c fastLogisticModel.cpp -o fastLogisticModel.o
gcc -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/RcppBlaze/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c registerDynamicSymbols.c -o registerDynamicSymbols.o
In file included from /data/gannet/ripley/R/test-dev/RcppBlaze/include/blaze/util/constraints/Pod.h:43,
from /data/gannet/ripley/R/test-dev/RcppBlaze/include/blaze/util/Constraints.h:74,
from /data/gannet/ripley/R/test-dev/RcppBlaze/include/blaze/Util.h:52,
from /data/gannet/ripley/R/test-dev/RcppBlaze/include/blaze/Blaze.h:45,
from /data/gannet/ripley/R/test-dev/RcppBlaze/include/RcppBlazeForward.h:28,
from /data/gannet/ripley/R/test-dev/RcppBlaze/include/RcppBlaze.h:13,
from fastLogisticModel.cpp:10:
/data/gannet/ripley/R/test-dev/RcppBlaze/include/blaze/util/typetraits/IsPod.h:88:32: warning: ‘template<class _Tp> struct std::is_pod’ is deprecated: use 'is_standard_layout && is_trivial' instead [-Wdeprecated-declarations]
88 | : public BoolConstant< std::is_pod<T>::value >
| ^~~~~~
In file included from /usr/include/c++/15/bits/cpp_type_traits.h:42,
from /usr/include/c++/15/cmath:49,
from /data/gannet/ripley/R/test-dev/Rcpp/include/Rcpp/platform/compiler.h:37,
from /data/gannet/ripley/R/test-dev/Rcpp/include/Rcpp/r/headers.h:67,
from /data/gannet/ripley/R/test-dev/Rcpp/include/RcppCommon.h:30,
from /data/gannet/ripley/R/test-dev/RcppBlaze/include/RcppBlazeForward.h:25:
/usr/include/c++/15/type_traits:931:5: note: declared here
931 | is_pod
| ^~~~~~
In file included from /data/gannet/ripley/R/test-dev/RcppBlaze/include/blaze/Util.h:81:
/data/gannet/ripley/R/test-dev/RcppBlaze/include/blaze/util/ThreadPool.h: In member function ‘void blaze::ThreadPool<TT, MT, LT, CT>::createThread()’:
/data/gannet/ripley/R/test-dev/RcppBlaze/include/blaze/util/ThreadPool.h:752:6: warning: ‘++’ expression of ‘volatile’-qualified type is deprecated [-Wvolatile]
752 | ++total_;
| ^~~~~~
/data/gannet/ripley/R/test-dev/RcppBlaze/include/blaze/util/ThreadPool.h:753:6: warning: ‘++’ expression of ‘volatile’-qualified type is deprecated [-Wvolatile]
753 | ++expected_;
| ^~~~~~~~~
/data/gannet/ripley/R/test-dev/RcppBlaze/include/blaze/util/ThreadPool.h:754:6: warning: ‘++’ expression of ‘volatile’-qualified type is deprecated [-Wvolatile]
754 | ++active_;
| ^~~~~~~
/data/gannet/ripley/R/test-dev/RcppBlaze/include/blaze/util/ThreadPool.h: In member function ‘bool blaze::ThreadPool<TT, MT, LT, CT>::executeTask()’:
/data/gannet/ripley/R/test-dev/RcppBlaze/include/blaze/util/ThreadPool.h:782:12: warning: ‘--’ expression of ‘volatile’-qualified type is deprecated [-Wvolatile]
782 | --active_;
| ^~~~~~~
/data/gannet/ripley/R/test-dev/RcppBlaze/include/blaze/util/ThreadPool.h:786:15: warning: ‘--’ expression of ‘volatile’-qualified type is deprecated [-Wvolatile]
786 | --total_;
| ^~~~~~
/data/gannet/ripley/R/test-dev/RcppBlaze/include/blaze/util/ThreadPool.h:791:12: warning: ‘++’ expression of ‘volatile’-qualified type is deprecated [-Wvolatile]
791 | ++active_;
| ^~~~~~~
In file included from /data/gannet/ripley/R/test-dev/RcppBlaze/include/blaze/util/constraints/Pod.h:43,
from /data/gannet/ripley/R/test-dev/RcppBlaze/include/blaze/util/Constraints.h:74,
from /data/gannet/ripley/R/test-dev/RcppBlaze/include/blaze/Util.h:52,
from /data/gannet/ripley/R/test-dev/RcppBlaze/include/blaze/Blaze.h:45,
from /data/gannet/ripley/R/test-dev/RcppBlaze/include/RcppBlazeForward.h:28,
from /data/gannet/ripley/R/test-dev/RcppBlaze/include/RcppBlaze.h:13,
from RcppExports.cpp:4:
/data/gannet/ripley/R/test-dev/RcppBlaze/include/blaze/util/typetraits/IsPod.h:88:32: warning: ‘template<class _Tp> struct std::is_pod’ is deprecated: use 'is_standard_layout && is_trivial' instead [-Wdeprecated-declarations]
88 | : public BoolConstant< std::is_pod<T>::value >
| ^~~~~~
In file included from /usr/include/c++/15/bits/cpp_type_traits.h:42,
from /usr/include/c++/15/cmath:49,
from /data/gannet/ripley/R/test-dev/Rcpp/include/Rcpp/platform/compiler.h:37,
from /data/gannet/ripley/R/test-dev/Rcpp/include/Rcpp/r/headers.h:67,
from /data/gannet/ripley/R/test-dev/Rcpp/include/RcppCommon.h:30,
from /data/gannet/ripley/R/test-dev/RcppBlaze/include/RcppBlazeForward.h:25:
/usr/include/c++/15/type_traits:931:5: note: declared here
931 | is_pod
| ^~~~~~
In file included from /data/gannet/ripley/R/test-dev/RcppBlaze/include/blaze/Util.h:81:
/data/gannet/ripley/R/test-dev/RcppBlaze/include/blaze/util/ThreadPool.h: In member function ‘void blaze::ThreadPool<TT, MT, LT, CT>::createThread()’:
/data/gannet/ripley/R/test-dev/RcppBlaze/include/blaze/util/ThreadPool.h:752:6: warning: ‘++’ expression of ‘volatile’-qualified type is deprecated [-Wvolatile]
752 | ++total_;
| ^~~~~~
/data/gannet/ripley/R/test-dev/RcppBlaze/include/blaze/util/ThreadPool.h:753:6: warning: ‘++’ expression of ‘volatile’-qualified type is deprecated [-Wvolatile]
753 | ++expected_;
| ^~~~~~~~~
/data/gannet/ripley/R/test-dev/RcppBlaze/include/blaze/util/ThreadPool.h:754:6: warning: ‘++’ expression of ‘volatile’-qualified type is deprecated [-Wvolatile]
754 | ++active_;
| ^~~~~~~
/data/gannet/ripley/R/test-dev/RcppBlaze/include/blaze/util/ThreadPool.h: In member function ‘bool blaze::ThreadPool<TT, MT, LT, CT>::executeTask()’:
/data/gannet/ripley/R/test-dev/RcppBlaze/include/blaze/util/ThreadPool.h:782:12: warning: ‘--’ expression of ‘volatile’-qualified type is deprecated [-Wvolatile]
782 | --active_;
| ^~~~~~~
/data/gannet/ripley/R/test-dev/RcppBlaze/include/blaze/util/ThreadPool.h:786:15: warning: ‘--’ expression of ‘volatile’-qualified type is deprecated [-Wvolatile]
786 | --total_;
| ^~~~~~
/data/gannet/ripley/R/test-dev/RcppBlaze/include/blaze/util/ThreadPool.h:791:12: warning: ‘++’ expression of ‘volatile’-qualified type is deprecated [-Wvolatile]
791 | ++active_;
| ^~~~~~~
g++ -std=gnu++20 -shared -L/usr/local/lib64 -o RcppLbfgsBlaze.so RcppExports.o fastLogisticModel.o registerDynamicSymbols.o -llapack -L/data/gannet/ripley/R/R-devel/lib -lRblas -lgfortran -lm -lquadmath -fopenmp
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/RcppLbfgsBlaze/src'
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/RcppLbfgsBlaze/src'
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/RcppLbfgsBlaze/src'
installing to /data/gannet/ripley/R/packages/tests-devel/RcppLbfgsBlaze.Rcheck/00LOCK-RcppLbfgsBlaze/00new/RcppLbfgsBlaze/libs
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (RcppLbfgsBlaze)