• using R Under development (unstable) (2026-02-11 r89395)
• using platform: x86_64-pc-linux-gnu
• R was compiled by     gcc (GCC) 15.1.1 20250521 (Red Hat 15.1.1-2)     GNU Fortran (GCC) 15.1.1 20250521 (Red Hat 15.1.1-2)
• running under: Fedora Linux 42 (Workstation Edition)
• using session charset: UTF-8 * current time: 2026-02-11 06:07:50 UTC
• using option ‘--no-stop-on-test-error’
• checking for file ‘REDCapExporter/DESCRIPTION’ ... OK
• this is package ‘REDCapExporter’ version ‘0.3.2’
• package encoding: UTF-8
• checking package namespace information ... OK
• checking package dependencies ... OK
• checking if this is a source package ... OK
• checking if there is a namespace ... OK
• checking for executable files ... OK
• checking for hidden files and directories ... OK
• checking for portable file names ... OK
• checking for sufficient/correct file permissions ... OK
• checking whether package ‘REDCapExporter’ can be installed ... OK See the install log for details.
• checking package directory ... OK
• checking ‘build’ directory ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking for left-over files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking code files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... OK
• checking whether the package can be loaded with stated dependencies ... OK
• checking whether the package can be unloaded cleanly ... OK
• checking whether the namespace can be loaded with stated dependencies ... OK
• checking whether the namespace can be unloaded cleanly ... OK
• checking loading without being on the library search path ... OK
• checking whether startup messages can be suppressed ... OK
• checking use of S3 registration ... OK
• checking dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... [6s/20s] OK
• checking Rd files ... OK
• checking Rd metadata ... OK
• checking Rd line widths ... OK
• checking Rd cross-references ... OK
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking Rd contents ... OK
• checking for unstated dependencies in examples ... OK
• checking contents of ‘data’ directory ... OK
• checking data for non-ASCII characters ... OK
• checking LazyData ... OK
• checking data for ASCII and uncompressed saves ... OK
• checking installed files from ‘inst/doc’ ... OK
• checking files in ‘vignettes’ ... OK
• checking examples ... OK
• checking for unstated dependencies in ‘tests’ ... OK
• checking tests ... [9s/14s] ERROR   Running ‘test-as.data.frame.R’   Running ‘test-build_r_pkg.R’   Running ‘test-export.R’   Running ‘test-format_record.R’   Running ‘test-keyring.R’ Running the tests in ‘tests/test-export.R’ failed. Complete output:   > library(REDCapExporter)   >   > # Tests rely on publicly available REDCap and tokens published   > # https://github.com/redcap-tools/redcap-test-datasets/tree/master   >   > # project_name token server_url pid server read_only operational notes   > # archer 9A81268476645C4E5F03428B8AC3AA7B https://bbmc.ouhsc.edu/redcap/api/ 153 oklahoma-bbmc TRUE TRUE simple structure; read-only   > # archer D70F9ACD1EDD6F151C6EA78683944E98 https://bbmc.ouhsc.edu/redcap/api/ 213 oklahoma-bbmc FALSE TRUE simple structure; read & write   > # archer 0434F0E9CF53ED0587847AB6E51DE762 https://bbmc.ouhsc.edu/redcap/api/ 212 oklahoma-bbmc TRUE TRUE longitudinal structure; read-only   > # archer D72C6485B52FE9F75D27B696977FBA43 https://bbmc.ouhsc.edu/redcap/api/ 268 oklahoma-bbmc TRUE TRUE Russian characters; read-only   >   > archer01_csv <-   + tryCatch(   + export_core(uri = 'https://bbmc.ouhsc.edu/redcap/api/', token = '9A81268476645C4E5F03428B8AC3AA7B'),   + error = function(e) {e}   + )   Getting Project Info   Getting project metadata   Getting user data   Getting project record   >   > Sys.setenv("REDCap_API_URI" = 'https://bbmc.ouhsc.edu/redcap/api/')   > Sys.setenv("REDCap_API_TOKEN" = '9A81268476645C4E5F03428B8AC3AA7B')   > archer01_json <- tryCatch(export_core(format = "json"), error = function(e) {e})   Getting Project Info   Getting project metadata   Getting user data   Getting project record   >   > if (inherits(archer01_csv, "error") | inherits(archer01_json, "error")) {   + if (inherits(archer01_csv, "curl_error") | inherits(archer01_json, "curl_error")) {   + # skip the rest of the testing   + print(sprintf("Skip test-export.R after curl error: %s", archer01_csv$message))   + } else {   + stop("in test-export.R an non curl related error occured when initially calling export_core")   + }   + } else {   +   + stopifnot(   + inherits(archer01_csv, "rcer_rccore"),   + inherits(archer01_json, "rcer_rccore"),   + inherits(archer01_csv$project_raw, "rcer_raw_project"),   + inherits(archer01_json$project_raw, "rcer_raw_project"),   + inherits(archer01_csv$metadata_raw, "rcer_raw_metadata"),   + inherits(archer01_json$metadata_raw, "rcer_raw_metadata"),   + inherits(archer01_csv$project_raw, "rcer_raw_project"),   + inherits(archer01_json$project_raw, "rcer_raw_project"),   + inherits(archer01_csv$record_raw, "rcer_raw_record"),   + inherits(archer01_json$record_raw, "rcer_raw_record"),   + grepl("text/csv", attr(archer01_csv$record_raw, "Content-Type")),   + grepl("application/json", attr(archer01_json$record_raw, "Content-Type"))   + )   +   + a1 <- format_record(archer01_csv)   + a2 <- format_record(archer01_json)   +   + # apparently the end of line characters are exported differently   + a1$address <- gsub('\n', ' ', gsub('\r', '', a1$address))   + a2$address <- gsub('\n', ' ', gsub('\r', '', a2$address))   + a1$comments <- gsub('\n', ' ', gsub('\r', '', a1$comments))   + a2$comments <- gsub('\n', ' ', gsub('\r', '', a2$comments))   +   + stopifnot(isTRUE(all.equal(a1, a2)))   +   + }   Error in `$<-.data.frame`(`*tmp*`, address, value = character(0)) :     replacement has 0 rows, data has 1   Calls: $<- -> $<-.data.frame   Execution halted
• checking for unstated dependencies in vignettes ... OK
• checking package vignettes ... OK
• checking re-building of vignette outputs ... [35s/38s] OK
• checking PDF version of manual ... OK
• checking HTML version of manual ... OK
• checking for non-standard things in the check directory ... OK
• checking for detritus in the temp directory ... OK
• DONE

Status: 1 ERROR