* installing *source* package ‘PropClust’ ... ** this is package ‘PropClust’ version ‘1.4-7’ ** package ‘PropClust’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘gcc (GCC) 15.1.1 20250521 (Red Hat 15.1.1-2)’ using Fortran compiler: ‘GNU Fortran (GCC) 15.1.1 20250521 (Red Hat 15.1.1-2)’ make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/PropClust/src' gfortran -fpic -g -O2 -mtune=native -Wall -pedantic -c PropClustParallelTrials.f90 -o PropClustParallelTrials.o PropClustParallelTrials.f90:3711:29: 3711 | ADJ(J,I)=LOG_POISSON_TAIL(MEAN,NINT(ADJ(I,J))) | 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] PropClustParallelTrials.f90:3718:21: 3718 | ADJ(I,J)=MEAN | 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] PropClustParallelTrials.f90:3844:29: 3844 | ADJ(J,I)=LOG_POISSON_TAIL(MEAN,NINT(ADJ(I,J))) | 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] PropClustParallelTrials.f90:3851:21: 3851 | ADJ(I,J)=MEAN | 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] PropClustParallelTrials.f90:3941:29: 3941 | ADJ(J,I)=LOG_POISSON_TAIL(MEAN,NINT(ADJ(I,J))) | 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] PropClustParallelTrials.f90:3948:21: 3948 | ADJ(I,J)=MEAN | 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] PropClustParallelTrials.f90:4033:29: 4033 | ADJ(J,I)=LOG_POISSON_TAIL(MEAN,NINT(ADJ(I,J))) | 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] PropClustParallelTrials.f90:4040:21: 4040 | ADJ(I,J)=MEAN | 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] PropClustParallelTrials.f90:4197:29: 4197 | ADJ(J,I)=LOG_POISSON_TAIL(MEAN,NINT(ADJ(I,J))) | 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] PropClustParallelTrials.f90:4204:21: 4204 | ADJ(I,J)=MEAN | 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] PropClustParallelTrials.f90:4377:29: 4377 | ADJ(J,I)=LOG_POISSON_TAIL(MEAN,NINT(ADJ(I,J))) | 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] PropClustParallelTrials.f90:4384:21: 4384 | ADJ(I,J)=MEAN | 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] PropClustParallelTrials.f90:5853:29: 5853 | ADJ(J,I)=LOG_POISSON_TAIL(MEAN,NINT(ADJ(I,J))) | 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] PropClustParallelTrials.f90:5860:21: 5860 | ADJ(I,J)=MEAN | 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] PropClustParallelTrials.f90:257:10: 257 | LIST,OUTPUT_UNIT) | 1~~~ Warning: Unused dummy argument ‘list’ at (1) [-Wunused-dummy-argument] PropClustParallelTrials.f90:257:15: 257 | LIST,OUTPUT_UNIT) | 1~~~~~~~~~~ Warning: Unused dummy argument ‘output_unit’ at (1) [-Wunused-dummy-argument] PropClustParallelTrials.f90:155:18: 155 | INTEGER :: I,X | 1 Warning: Unused variable ‘i’ declared at (1) [-Wunused-variable] PropClustParallelTrials.f90:109:59: 109 | FUNCTION CALC_LOGLIK(ADJ,TESTMODULE,PHAT,AHAT,NODES,CLUSTERS) | 1~~~~~~~ Warning: Unused dummy argument ‘clusters’ at (1) [-Wunused-dummy-argument] PropClustParallelTrials.f90:2995:24: 2995 | INTEGER :: NODES,I,J,NODES2,TEMP,TEMP2 | 1 Warning: Unused variable ‘j’ declared at (1) [-Wunused-variable] PropClustParallelTrials.f90:2941:18: 2941 | INTEGER :: I,J,WORDS,WORDSMOD,TEMP | 1 Warning: Unused variable ‘j’ declared at (1) [-Wunused-variable] PropClustParallelTrials.f90:2937:43: 2937 | SUBROUTINE FILTER_DATA(WORDPAIR_COUNT,LIST,WORDS,WORDSMOD,ORDER_LIST) | 1~~~ Warning: Unused dummy argument ‘list’ at (1) [-Wunused-dummy-argument] PropClustParallelTrials.f90:2945:16: 2945 | LOGICAL :: NOT_DONE | 1~~~~~~~ Warning: Unused variable ‘not_done’ declared at (1) [-Wunused-variable] PropClustParallelTrials.f90:2937:54: 2937 | SUBROUTINE FILTER_DATA(WORDPAIR_COUNT,LIST,WORDS,WORDSMOD,ORDER_LIST) | 1~~~~~~~ Warning: Unused dummy argument ‘wordsmod’ at (1) [-Wunused-dummy-argument] PropClustParallelTrials.f90:2897:18: 2897 | INTEGER :: I,J,NODES | 1 Warning: Unused variable ‘j’ declared at (1) [-Wunused-variable] PropClustParallelTrials.f90:2853:20: 2853 | INTEGER :: I,J,K,NODES,CLUSTERS | 1 Warning: Unused variable ‘k’ declared at (1) [-Wunused-variable] PropClustParallelTrials.f90:2855:25: 2855 | DOUBLE PRECISION :: TEMP | 1~~~ Warning: Unused variable ‘temp’ declared at (1) [-Wunused-variable] PropClustParallelTrials.f90:2734:20: 2734 | INTEGER :: I,J,K,ORIGINAL_ASSIGNMENT,NODES,CLUSTERS,QSEC,MAP_LENGTH | 1 Warning: Unused variable ‘k’ declared at (1) [-Wunused-variable] PropClustParallelTrials.f90:2728:84: 2728 | PSUM,ASUM,L2NORM,LOGLIK,L2,QNEWT,QSEC,UPHILL,MAP_LENGTH) | 1~~~~~~~~~ Warning: Unused dummy argument ‘map_length’ at (1) [-Wunused-dummy-argument] PropClustParallelTrials.f90:2728:39: 2728 | PSUM,ASUM,L2NORM,LOGLIK,L2,QNEWT,QSEC,UPHILL,MAP_LENGTH) | 1~~~ Warning: Unused dummy argument ‘psum’ at (1) [-Wunused-dummy-argument] PropClustParallelTrials.f90:2728:66: 2728 | PSUM,ASUM,L2NORM,LOGLIK,L2,QNEWT,QSEC,UPHILL,MAP_LENGTH) | 1~~~~ Warning: Unused dummy argument ‘qnewt’ at (1) [-Wunused-dummy-argument] PropClustParallelTrials.f90:2728:72: 2728 | PSUM,ASUM,L2NORM,LOGLIK,L2,QNEWT,QSEC,UPHILL,MAP_LENGTH) | 1~~~ Warning: Unused dummy argument ‘qsec’ at (1) [-Wunused-dummy-argument] PropClustParallelTrials.f90:2741:65: 2741 | DOUBLE PRECISION :: LOGLIK,TRIAL_LOGLIK,L2NORM,TRIAL_L2NORM,TEST_CRIT | 1~~~~~~~~ Warning: Unused variable ‘test_crit’ declared at (1) [-Wunused-variable] PropClustParallelTrials.f90:2728:77: 2728 | PSUM,ASUM,L2NORM,LOGLIK,L2,QNEWT,QSEC,UPHILL,MAP_LENGTH) | 1~~~~~ Warning: Unused dummy argument ‘uphill’ at (1) [-Wunused-dummy-argument] PropClustParallelTrials.f90:2618:22: 2618 | INTEGER :: I,J,K,ORIGINAL_ASSIGNMENT,NODES,CLUSTERS,QSEC,MAP_LENGTH | 1 Warning: Unused variable ‘k’ declared at (1) [-Wunused-variable] PropClustParallelTrials.f90:2075:18: 2075 | INTEGER :: I,J,ITERATION,ERRORFLAG | 1 Warning: Unused variable ‘j’ declared at (1) [-Wunused-variable] PropClustParallelTrials.f90:2085:30: 2085 | INTEGER, DIMENSION(2) :: SHAPE_TEST | 1~~~~~~~~~ Warning: Unused variable ‘shape_test’ declared at (1) [-Wunused-variable] PropClustParallelTrials.f90:2082:52: 2082 | LOGICAL :: NOT_CONVERGED2,L2BOOL,INCREASE_FLAG,TESTFLAG,UPHILL | 1~~~~~~~ Warning: Unused variable ‘testflag’ declared at (1) [-Wunused-variable] PropClustParallelTrials.f90:2064:69: 2064 | L2BOOL,PSUM,ASUM,NEW_L2,NEW_LOGLIK,QSEC,UPHILL,VEC_LENGTH) | 1~~~~~ Warning: Unused dummy argument ‘uphill’ at (1) [-Wunused-dummy-argument] PropClustParallelTrials.f90:1913:40: 1913 | INTEGER :: I,J,ITERATION,ERRORFLAG,ITS_BEFORE_CHECK | 1~~~~~~~~~~~~~~~ Warning: Unused variable ‘its_before_check’ declared at (1) [-Wunused-variable] PropClustParallelTrials.f90:1913:18: 1913 | INTEGER :: I,J,ITERATION,ERRORFLAG,ITS_BEFORE_CHECK | 1 Warning: Unused variable ‘j’ declared at (1) [-Wunused-variable] PropClustParallelTrials.f90:1923:30: 1923 | INTEGER, DIMENSION(2) :: SHAPE_TEST | 1~~~~~~~~~ Warning: Unused variable ‘shape_test’ declared at (1) [-Wunused-variable] PropClustParallelTrials.f90:1920:52: 1920 | LOGICAL :: NOT_CONVERGED2,L2BOOL,INCREASE_FLAG,TESTFLAG,UPHILL | 1~~~~~~~ Warning: Unused variable ‘testflag’ declared at (1) [-Wunused-variable] PropClustParallelTrials.f90:1902:64: 1902 | NEW_L2,NEW_LOGLIK,QSEC,UPHILL,VEC_LENGTH) | 1~~~~~ Warning: Unused dummy argument ‘uphill’ at (1) [-Wunused-dummy-argument] PropClustParallelTrials.f90:1835:45: 1835 | INTEGER :: ITERATION,NODES,CLUSTERS,I,J,K | 1 Warning: Unused variable ‘k’ declared at (1) [-Wunused-variable] PropClustParallelTrials.f90:1829:55: 1829 | SUBROUTINE CHECK_CONVERGENCE2(AHAT,AOLD,PHAT,POLD,NODES,CLUSTERS,ITERATION,NOTCONVERGED_BOOL) | 1~~~~ Warning: Unused dummy argument ‘nodes’ at (1) [-Wunused-dummy-argument] PropClustParallelTrials.f90:1572:25: 1572 | INTEGER :: I, J, K, L | 1 Warning: Unused variable ‘l’ declared at (1) [-Wunused-variable] PropClustParallelTrials.f90:1440:16: 1440 | INTEGER :: I,J,K,ITERATION,NODES,CLUSTERS,INCREASE_WARNINGS | 1 Warning: Unused variable ‘i’ declared at (1) [-Wunused-variable] PropClustParallelTrials.f90:1440:18: 1440 | INTEGER :: I,J,K,ITERATION,NODES,CLUSTERS,INCREASE_WARNINGS | 1 Warning: Unused variable ‘j’ declared at (1) [-Wunused-variable] PropClustParallelTrials.f90:1440:20: 1440 | INTEGER :: I,J,K,ITERATION,NODES,CLUSTERS,INCREASE_WARNINGS | 1 Warning: Unused variable ‘k’ declared at (1) [-Wunused-variable] PropClustParallelTrials.f90:1256:30: 1256 | PSUM,ASUM,NEW_L2,NEW_LOGLIK) | 1~~~ Warning: Unused dummy argument ‘asum’ at (1) [-Wunused-dummy-argument] PropClustParallelTrials.f90:1267:18: 1267 | INTEGER :: I,J,K,NODES,CLUSTERS | 1 Warning: Unused variable ‘j’ declared at (1) [-Wunused-variable] PropClustParallelTrials.f90:1267:20: 1267 | INTEGER :: I,J,K,NODES,CLUSTERS | 1 Warning: Unused variable ‘k’ declared at (1) [-Wunused-variable] PropClustParallelTrials.f90:1161:87: 1161 | SUBROUTINE UPDATE_PARAMETERS_ONCE(ADJ,TESTMODULE,PHAT,AHAT,NODES,CLUSTERS,L2,PSUM,ASUM,& | 1~~~ Warning: Unused dummy argument ‘asum’ at (1) [-Wunused-dummy-argument] PropClustParallelTrials.f90:1172:18: 1172 | INTEGER :: I,J,K,NODES,CLUSTERS | 1 Warning: Unused variable ‘j’ declared at (1) [-Wunused-variable] PropClustParallelTrials.f90:1172:20: 1172 | INTEGER :: I,J,K,NODES,CLUSTERS | 1 Warning: Unused variable ‘k’ declared at (1) [-Wunused-variable] PropClustParallelTrials.f90:1103:20: 1103 | INTEGER :: I,J,K,NODES,CLUSTERS,TESTI,TESTJ | 1 Warning: Unused variable ‘k’ declared at (1) [-Wunused-variable] PropClustParallelTrials.f90:1059:46: 1059 | DOUBLE PRECISION, DIMENSION(CLUSTERS) :: ADEN,PCLUSTERSUM | 1~~~ Warning: Unused variable ‘aden’ declared at (1) [-Wunused-variable] PropClustParallelTrials.f90:1051:31: 1051 | SUBROUTINE UPDATE_AHAT_MM(ADJ,TESTMODULE,PHAT,AHAT,NODES,CLUSTERS,L2,ASUM,PCLUSTERSUM) | 1~~ Warning: Unused dummy argument ‘adj’ at (1) [-Wunused-dummy-argument] PropClustParallelTrials.f90:1054:20: 1054 | INTEGER :: I,J,K,NODES,CLUSTERS | 1 Warning: Unused variable ‘k’ declared at (1) [-Wunused-variable] PropClustParallelTrials.f90:1051:46: 1051 | SUBROUTINE UPDATE_AHAT_MM(ADJ,TESTMODULE,PHAT,AHAT,NODES,CLUSTERS,L2,ASUM,PCLUSTERSUM) | 1~~~ Warning: Unused dummy argument ‘phat’ at (1) [-Wunused-dummy-argument] PropClustParallelTrials.f90:1056:25: 1056 | DOUBLE PRECISION :: TEMP | 1~~~ Warning: Unused variable ‘temp’ declared at (1) [-Wunused-variable] PropClustParallelTrials.f90:1051:35: 1051 | SUBROUTINE UPDATE_AHAT_MM(ADJ,TESTMODULE,PHAT,AHAT,NODES,CLUSTERS,L2,ASUM,PCLUSTERSUM) | 1~~~~~~~~~ Warning: Unused dummy argument ‘testmodule’ at (1) [-Wunused-dummy-argument] PropClustParallelTrials.f90:1021:55: 1021 | DOUBLE PRECISION, DIMENSION(CLUSTERS,CLUSTERS) :: ASUM2 | 1~~~~ Warning: Unused variable ‘asum2’ declared at (1) [-Wunused-variable] PropClustParallelTrials.f90:1016:18: 1016 | INTEGER :: I,J,CURRENT_CLUSTER,NEW_CLUSTER,NODE_POS,ICLUST,OUTPUT_UNIT2,K,KK,NODES,CLUSTERS | 1 Warning: Unused variable ‘j’ declared at (1) [-Wunused-variable] PropClustParallelTrials.f90:1016:77: 1016 | INTEGER :: I,J,CURRENT_CLUSTER,NEW_CLUSTER,NODE_POS,ICLUST,OUTPUT_UNIT2,K,KK,NODES,CLUSTERS | 1 Warning: Unused variable ‘k’ declared at (1) [-Wunused-variable] PropClustParallelTrials.f90:1016:79: 1016 | INTEGER :: I,J,CURRENT_CLUSTER,NEW_CLUSTER,NODE_POS,ICLUST,OUTPUT_UNIT2,K,KK,NODES,CLUSTERS | 1~ Warning: Unused variable ‘kk’ declared at (1) [-Wunused-variable] PropClustParallelTrials.f90:1016:64: 1016 | INTEGER :: I,J,CURRENT_CLUSTER,NEW_CLUSTER,NODE_POS,ICLUST,OUTPUT_UNIT2,K,KK,NODES,CLUSTERS | 1~~~~~~~~~~~ Warning: Unused variable ‘output_unit2’ declared at (1) [-Wunused-variable] PropClustParallelTrials.f90:938:66: 938 | DOUBLE PRECISION ::L2NORM,FACTORIZABILITY,LOGLIK,SUM_SQUARES,CRITERIA | 1~~~~~~~ Warning: Unused variable ‘criteria’ declared at (1) [-Wunused-variable] PropClustParallelTrials.f90:938:31: 938 | DOUBLE PRECISION ::L2NORM,FACTORIZABILITY,LOGLIK,SUM_SQUARES,CRITERIA | 1~~~~~~~~~~~~~~ Warning: Unused variable ‘factorizability’ declared at (1) [-Wunused-variable] PropClustParallelTrials.f90:929:64: 929 | INTEGER :: NODES,CLUSTERS,I,J,K,L,CLUSTER_ITERATIONS=0,L2I,INITBOOL,QSEC,MAP_LENGTH | 1~~~~~~~ Warning: Unused variable ‘initbool’ declared at (1) [-Wunused-variable] PropClustParallelTrials.f90:929:33: 929 | INTEGER :: NODES,CLUSTERS,I,J,K,L,CLUSTER_ITERATIONS=0,L2I,INITBOOL,QSEC,MAP_LENGTH | 1 Warning: Unused variable ‘j’ declared at (1) [-Wunused-variable] PropClustParallelTrials.f90:929:35: 929 | INTEGER :: NODES,CLUSTERS,I,J,K,L,CLUSTER_ITERATIONS=0,L2I,INITBOOL,QSEC,MAP_LENGTH | 1 Warning: Unused variable ‘k’ declared at (1) [-Wunused-variable] PropClustParallelTrials.f90:929:37: 929 | INTEGER :: NODES,CLUSTERS,I,J,K,L,CLUSTER_ITERATIONS=0,L2I,INITBOOL,QSEC,MAP_LENGTH | 1 Warning: Unused variable ‘l’ declared at (1) [-Wunused-variable] PropClustParallelTrials.f90:929:60: 929 | INTEGER :: NODES,CLUSTERS,I,J,K,L,CLUSTER_ITERATIONS=0,L2I,INITBOOL,QSEC,MAP_LENGTH | 1~~ Warning: Unused variable ‘l2i’ declared at (1) [-Wunused-variable] PropClustParallelTrials.f90:938:54: 938 | DOUBLE PRECISION ::L2NORM,FACTORIZABILITY,LOGLIK,SUM_SQUARES,CRITERIA | 1~~~~~~~~~~ Warning: Unused variable ‘sum_squares’ declared at (1) [-Wunused-variable] PropClustParallelTrials.f90:864:46: 864 | DOUBLE PRECISION, DIMENSION(CLUSTERS) :: CLUSTER_SIZES,NEW_SIZES,TEMP_SIZES,CRITS | 1~~~~~~~~~~~~ Warning: Unused variable ‘cluster_sizes’ declared at (1) [-Wunused-variable] PropClustParallelTrials.f90:863:56: 863 | DOUBLE PRECISION, DIMENSION(CLUSTERS) :: TEMP_SUMS,CLUSTER_SUMS,NEW_SUMS | 1~~~~~~~~~~~ Warning: Unused variable ‘cluster_sums’ declared at (1) [-Wunused-variable] PropClustParallelTrials.f90:864:81: 864 | DOUBLE PRECISION, DIMENSION(CLUSTERS) :: CLUSTER_SIZES,NEW_SIZES,TEMP_SIZES,CRITS | 1~~~~ Warning: Unused variable ‘crits’ declared at (1) [-Wunused-variable] PropClustParallelTrials.f90:858:47: 858 | INTEGER :: CLUSTERS,TEMP2,NODES,I,J,K,L,M,ITERATION,OLD,ITERATIONS | 1~~~~~~~~ Warning: Unused variable ‘iteration’ declared at (1) [-Wunused-variable] PropClustParallelTrials.f90:858:43: 858 | INTEGER :: CLUSTERS,TEMP2,NODES,I,J,K,L,M,ITERATION,OLD,ITERATIONS | 1 Warning: Unused variable ‘l’ declared at (1) [-Wunused-variable] PropClustParallelTrials.f90:858:45: 858 | INTEGER :: CLUSTERS,TEMP2,NODES,I,J,K,L,M,ITERATION,OLD,ITERATIONS | 1 Warning: Unused variable ‘m’ declared at (1) [-Wunused-variable] PropClustParallelTrials.f90:865:40: 865 | DOUBLE PRECISION :: TEMP_CRIT,CRIT,NEW_CRIT | 1~~~~~~~ Warning: Unused variable ‘new_crit’ declared at (1) [-Wunused-variable] PropClustParallelTrials.f90:864:60: 864 | DOUBLE PRECISION, DIMENSION(CLUSTERS) :: CLUSTER_SIZES,NEW_SIZES,TEMP_SIZES,CRITS | 1~~~~~~~~ Warning: Unused variable ‘new_sizes’ declared at (1) [-Wunused-variable] PropClustParallelTrials.f90:863:69: 863 | DOUBLE PRECISION, DIMENSION(CLUSTERS) :: TEMP_SUMS,CLUSTER_SUMS,NEW_SUMS | 1~~~~~~~ Warning: Unused variable ‘new_sums’ declared at (1) [-Wunused-variable] PropClustParallelTrials.f90:858:57: 858 | INTEGER :: CLUSTERS,TEMP2,NODES,I,J,K,L,M,ITERATION,OLD,ITERATIONS | 1~~ Warning: Unused variable ‘old’ declared at (1) [-Wunused-variable] PropClustParallelTrials.f90:859:45: 859 | INTEGER, DIMENSION(NODES) :: TESTMODULE,TEMP | 1~~~ Warning: Unused variable ‘temp’ declared at (1) [-Wunused-variable] PropClustParallelTrials.f90:864:70: 864 | DOUBLE PRECISION, DIMENSION(CLUSTERS) :: CLUSTER_SIZES,NEW_SIZES,TEMP_SIZES,CRITS | 1~~~~~~~~~ Warning: Unused variable ‘temp_sizes’ declared at (1) [-Wunused-variable] PropClustParallelTrials.f90:863:46: 863 | DOUBLE PRECISION, DIMENSION(CLUSTERS) :: TEMP_SUMS,CLUSTER_SUMS,NEW_SUMS | 1~~~~~~~~ Warning: Unused variable ‘temp_sums’ declared at (1) [-Wunused-variable] PropClustParallelTrials.f90:761:45: 761 | INTEGER :: CLUSTERS,TEMP2,NODES,I,J,K,L,M,ITERATION,OLD | 1 Warning: Unused variable ‘m’ declared at (1) [-Wunused-variable] PropClustParallelTrials.f90:757:61: 757 | SUBROUTINE QUICK_CLUSTER2(ADJ,TESTMODULE,CLUSTERS,NODES,ROW_SUMS) | 1~~~~~~~ Warning: Unused dummy argument ‘row_sums’ at (1) [-Wunused-dummy-argument] PropClustParallelTrials.f90:764:53: 764 | DOUBLE PRECISION, DIMENSION(NODES) :: ROW_SUMS, ROW_SUMS_TEMP | 1~~~~~~~~~~~~ Warning: Unused variable ‘row_sums_temp’ declared at (1) [-Wunused-variable] PropClustParallelTrials.f90:762:45: 762 | INTEGER, DIMENSION(NODES) :: TESTMODULE,TEMP | 1~~~ Warning: Unused variable ‘temp’ declared at (1) [-Wunused-variable] PropClustParallelTrials.f90:768:25: 768 | DOUBLE PRECISION :: TEMP_CRIT,CRIT,NEW_CRIT | 1~~~~~~~~ Warning: Unused variable ‘temp_crit’ declared at (1) [-Wunused-variable] PropClustParallelTrials.f90:670:52: 670 | DOUBLE PRECISION, DIMENSION(NODES,CLUSTERS) :: CLUSTER_SUMS | 1~~~~~~~~~~~ Warning: Unused variable ‘cluster_sums’ declared at (1) [-Wunused-variable] PropClustParallelTrials.f90:664:60: 664 | SUBROUTINE QUICK_CLUSTER(ADJ,TESTMODULE,CLUSTERS,NODES,ROW_SUMS) | 1~~~~~~~ Warning: Unused dummy argument ‘row_sums’ at (1) [-Wunused-dummy-argument] PropClustParallelTrials.f90:669:53: 669 | DOUBLE PRECISION, DIMENSION(NODES) :: ROW_SUMS, ROW_SUMS_TEMP | 1~~~~~~~~~~~~ Warning: Unused variable ‘row_sums_temp’ declared at (1) [-Wunused-variable] PropClustParallelTrials.f90:667:45: 667 | INTEGER, DIMENSION(NODES) :: TESTMODULE,TEMP | 1~~~ Warning: Unused variable ‘temp’ declared at (1) [-Wunused-variable] PropClustParallelTrials.f90:619:41: 619 | INTEGER :: CLUSTERS,TEMP2,NODES,I,J,ITERATION | 1~~~~~~~~ Warning: Unused variable ‘iteration’ declared at (1) [-Wunused-variable] PropClustParallelTrials.f90:626:16: 626 | LOGICAL :: NOT_CONVERGED | 1~~~~~~~~~~~~ Warning: Unused variable ‘not_converged’ declared at (1) [-Wunused-variable] PropClustParallelTrials.f90:617:63: 617 | SUBROUTINE CHECK_MAXAVGCONV(ADJ,TESTMODULE,CLUSTERS,NODES,ROW_SUMS) | 1~~~~~~~ Warning: Unused dummy argument ‘row_sums’ at (1) [-Wunused-dummy-argument] PropClustParallelTrials.f90:622:53: 622 | DOUBLE PRECISION, DIMENSION(NODES) :: ROW_SUMS, ROW_SUMS_TEMP | 1~~~~~~~~~~~~ Warning: Unused variable ‘row_sums_temp’ declared at (1) [-Wunused-variable] PropClustParallelTrials.f90:620:45: 620 | INTEGER, DIMENSION(NODES) :: TESTMODULE,TEMP | 1~~~ Warning: Unused variable ‘temp’ declared at (1) [-Wunused-variable] PropClustParallelTrials.f90:623:59: 623 | DOUBLE PRECISION, DIMENSION(CLUSTERS) :: CLUSTER_SUMS,TEMP_SUMS | 1~~~~~~~~ Warning: Unused variable ‘temp_sums’ declared at (1) [-Wunused-variable] PropClustParallelTrials.f90:624:46: 624 | DOUBLE PRECISION, DIMENSION(CLUSTERS) :: TEMP_VEC | 1~~~~~~~ Warning: Unused variable ‘temp_vec’ declared at (1) [-Wunused-variable] PropClustParallelTrials.f90:577:47: 577 | INTEGER, DIMENSION(NODES) :: TESTMODULE,TEMP | 1~~~ Warning: Unused variable ‘temp’ declared at (1) [-Wunused-variable] PropClustParallelTrials.f90:523:32: 523 | DOUBLE PRECISION :: LOGLIK,AHATPP,CALC_FAKE_LOGLIK | 1~~~~~ Warning: Unused variable ‘ahatpp’ declared at (1) [-Wunused-variable] PropClustParallelTrials.f90:523:39: 523 | DOUBLE PRECISION :: LOGLIK,AHATPP,CALC_FAKE_LOGLIK | 1~~~~~~~~~~~~~~~ Warning: Unused variable ‘calc_fake_loglik’ declared at (1) [-Wunused-variable] PropClustParallelTrials.f90:511:76: 511 | NEW_CLUSTER, CURRENT_LOGLIK, NODES,CLUSTERS) | 1~~~~~~~ Warning: Unused dummy argument ‘clusters’ at (1) [-Wunused-dummy-argument] PropClustParallelTrials.f90:519:18: 519 | INTEGER :: I,J,NODES,CLUSTERS,CURRENT_NODE,NEW_CLUSTER | 1 Warning: Unused variable ‘j’ declared at (1) [-Wunused-variable] PropClustParallelTrials.f90:523:25: 523 | DOUBLE PRECISION :: LOGLIK,AHATPP,CALC_FAKE_LOGLIK | 1~~~~~ Warning: Unused variable ‘loglik’ declared at (1) [-Wunused-variable] PropClustParallelTrials.f90:487:32: 487 | DOUBLE PRECISION :: LOGLIK,AHATPP,CALC_FAKE_LOGLIK | 1~~~~~ Warning: Unused variable ‘ahatpp’ declared at (1) [-Wunused-variable] PropClustParallelTrials.f90:487:39: 487 | DOUBLE PRECISION :: LOGLIK,AHATPP,CALC_FAKE_LOGLIK | 1~~~~~~~~~~~~~~~ Warning: Unused variable ‘calc_fake_loglik’ declared at (1) [-Wunused-variable] PropClustParallelTrials.f90:478:72: 478 | NEW_CLUSTER, CURRENT_L2, NODES,CLUSTERS) | 1~~~~~~~ Warning: Unused dummy argument ‘clusters’ at (1) [-Wunused-dummy-argument] PropClustParallelTrials.f90:483:18: 483 | INTEGER :: I,J,NODES,CLUSTERS,CURRENT_NODE,NEW_CLUSTER | 1 Warning: Unused variable ‘j’ declared at (1) [-Wunused-variable] PropClustParallelTrials.f90:487:25: 487 | DOUBLE PRECISION :: LOGLIK,AHATPP,CALC_FAKE_LOGLIK | 1~~~~~ Warning: Unused variable ‘loglik’ declared at (1) [-Wunused-variable] PropClustParallelTrials.f90:454:59: 454 | FUNCTION CALC_L2NORM(ADJ,TESTMODULE,PHAT,AHAT,NODES,CLUSTERS) | 1~~~~~~~ Warning: Unused dummy argument ‘clusters’ at (1) [-Wunused-dummy-argument] PropClustParallelTrials.f90:425:64: 425 | FUNCTION CALC_FAKE_LOGLIK(ADJ,TESTMODULE,PHAT,AHAT,NODES,CLUSTERS) | 1~~~~~~~ Warning: Unused dummy argument ‘clusters’ at (1) [-Wunused-dummy-argument] PropClustParallelTrials.f90:3543:22: 3543 | INTEGER :: A,B,ERROR_POSITION,I,J,WORDS | 1~~~~~~~~~~~~~ Warning: Unused variable ‘error_position’ declared at (1) [-Wunused-variable] PropClustParallelTrials.f90:3543:37: 3543 | INTEGER :: A,B,ERROR_POSITION,I,J,WORDS | 1 Warning: Unused variable ‘i’ declared at (1) [-Wunused-variable] PropClustParallelTrials.f90:3543:39: 3543 | INTEGER :: A,B,ERROR_POSITION,I,J,WORDS | 1 Warning: Unused variable ‘j’ declared at (1) [-Wunused-variable] PropClustParallelTrials.f90:3451:22: 3451 | INTEGER :: A,B,ERROR_POSITION,I,J,K,LAST,WORDS | 1~~~~~~~~~~~~~ Warning: Unused variable ‘error_position’ declared at (1) [-Wunused-variable] PropClustParallelTrials.f90:3255:18: 3255 | INTEGER :: I,J | 1 Warning: Unused variable ‘i’ declared at (1) [-Wunused-variable] PropClustParallelTrials.f90:3255:20: 3255 | INTEGER :: I,J | 1 Warning: Unused variable ‘j’ declared at (1) [-Wunused-variable] PropClustParallelTrials.f90:3152:20: 3152 | INTEGER :: I,J,COUNTER,SPACEVAL | 1 Warning: Unused variable ‘j’ declared at (1) [-Wunused-variable] PropClustParallelTrials.f90:3098:18: 3098 | INTEGER :: I,J,COUNTER | 1 Warning: Unused variable ‘i’ declared at (1) [-Wunused-variable] PropClustParallelTrials.f90:3098:20: 3098 | INTEGER :: I,J,COUNTER | 1 Warning: Unused variable ‘j’ declared at (1) [-Wunused-variable] PropClustParallelTrials.f90:3661:41: 3661 | INTEGER :: NODES,CLUSTERS,I,J,K,L,CLUSTER_ITERATIONS=0,L2I | 1~~~~~~~~~~~~~~~~~ Warning: Unused variable ‘cluster_iterations’ declared at (1) [-Wunused-variable] PropClustParallelTrials.f90:3661:37: 3661 | INTEGER :: NODES,CLUSTERS,I,J,K,L,CLUSTER_ITERATIONS=0,L2I | 1 Warning: Unused variable ‘k’ declared at (1) [-Wunused-variable] PropClustParallelTrials.f90:3661:39: 3661 | INTEGER :: NODES,CLUSTERS,I,J,K,L,CLUSTER_ITERATIONS=0,L2I | 1 Warning: Unused variable ‘l’ declared at (1) [-Wunused-variable] PropClustParallelTrials.f90:3669:18: 3669 | LOGICAL :: NOT_CONVERGED,L2 | 1~~~~~~~~~~~~ Warning: Unused variable ‘not_converged’ declared at (1) [-Wunused-variable] PropClustParallelTrials.f90:3668:56: 3668 | DOUBLE PRECISION ::L2NORM,LOGLIK,FACTORIZABILITY,SUM_SQUARES,MEAN | 1~~~~~~~~~~ Warning: Unused variable ‘sum_squares’ declared at (1) [-Wunused-variable] PropClustParallelTrials.f90:3757:37: 3757 | INTEGER :: NODES,CLUSTERS,I,J,K,L,CLUSTER_ITERATIONS=0,L2I,INITBOOL,QSEC,MAP_LENGTH | 1 Warning: Unused variable ‘k’ declared at (1) [-Wunused-variable] PropClustParallelTrials.f90:3757:39: 3757 | INTEGER :: NODES,CLUSTERS,I,J,K,L,CLUSTER_ITERATIONS=0,L2I,INITBOOL,QSEC,MAP_LENGTH | 1 Warning: Unused variable ‘l’ declared at (1) [-Wunused-variable] PropClustParallelTrials.f90:3766:56: 3766 | DOUBLE PRECISION ::L2NORM,FACTORIZABILITY,LOGLIK,SUM_SQUARES,MEAN | 1~~~~~~~~~~ Warning: Unused variable ‘sum_squares’ declared at (1) [-Wunused-variable] PropClustParallelTrials.f90:3874:37: 3874 | INTEGER :: NODES,CLUSTERS,I,J,K,L2I,QSEC,MAP_LENGTH | 1 Warning: Unused variable ‘k’ declared at (1) [-Wunused-variable] PropClustParallelTrials.f90:3881:56: 3881 | DOUBLE PRECISION ::L2NORM,LOGLIK,FACTORIZABILITY,SUM_SQUARES,CRITERIA,MEAN | 1~~~~~~~~~~ Warning: Unused variable ‘sum_squares’ declared at (1) [-Wunused-variable] PropClustParallelTrials.f90:3968:37: 3968 | INTEGER :: NODES,CLUSTERS,I,J,K,L2I,QSEC,MAP_LENGTH | 1 Warning: Unused variable ‘k’ declared at (1) [-Wunused-variable] PropClustParallelTrials.f90:3975:56: 3975 | DOUBLE PRECISION ::L2NORM,LOGLIK,FACTORIZABILITY,SUM_SQUARES,CRITERIA,MEAN | 1~~~~~~~~~~ Warning: Unused variable ‘sum_squares’ declared at (1) [-Wunused-variable] PropClustParallelTrials.f90:4081:35: 4081 | INTEGER :: NODES,CLUSTERS,I,J,K,L,CLUSTER_ITERATIONS=0,L2I,INITBOOL,QSEC,MAP_LENGTH | 1 Warning: Unused variable ‘k’ declared at (1) [-Wunused-variable] PropClustParallelTrials.f90:4081:37: 4081 | INTEGER :: NODES,CLUSTERS,I,J,K,L,CLUSTER_ITERATIONS=0,L2I,INITBOOL,QSEC,MAP_LENGTH | 1 Warning: Unused variable ‘l’ declared at (1) [-Wunused-variable] PropClustParallelTrials.f90:4090:54: 4090 | DOUBLE PRECISION ::L2NORM,FACTORIZABILITY,LOGLIK,SUM_SQUARES,CRITERIA,MEAN | 1~~~~~~~~~~ Warning: Unused variable ‘sum_squares’ declared at (1) [-Wunused-variable] PropClustParallelTrials.f90:4246:35: 4246 | INTEGER :: NODES,CLUSTERS,I,J,K,L,CLUSTER_ITERATIONS=0,L2I,INITBOOL,QSEC,MAP_LENGTH | 1 Warning: Unused variable ‘k’ declared at (1) [-Wunused-variable] PropClustParallelTrials.f90:4246:37: 4246 | INTEGER :: NODES,CLUSTERS,I,J,K,L,CLUSTER_ITERATIONS=0,L2I,INITBOOL,QSEC,MAP_LENGTH | 1 Warning: Unused variable ‘l’ declared at (1) [-Wunused-variable] PropClustParallelTrials.f90:4255:54: 4255 | DOUBLE PRECISION ::L2NORM,FACTORIZABILITY,LOGLIK,SUM_SQUARES,CRITERIA,MEAN | 1~~~~~~~~~~ Warning: Unused variable ‘sum_squares’ declared at (1) [-Wunused-variable] PropClustParallelTrials.f90:5772:20: 5772 | INTEGER :: I,J,K,ITERATION,NODES,CLUSTERS=2,L2I | 1 Warning: Unused variable ‘k’ declared at (1) [-Wunused-variable] PropClustParallelTrials.f90:5776:44: 5776 | DOUBLE PRECISION, DIMENSION(NODES) :: PN | 1~ Warning: Unused variable ‘pn’ declared at (1) [-Wunused-variable] gcc -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c init.c -o init.o gcc -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c minWhichMin.c -o minWhichMin.o gcc -shared -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -fpic -L/usr/local/lib64 -o PropClust.so PropClustParallelTrials.o init.o minWhichMin.o -lgfortran -lm -lquadmath make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/PropClust/src' make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/PropClust/src' make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/PropClust/src' installing to /data/gannet/ripley/R/packages/tests-devel/PropClust.Rcheck/00LOCK-PropClust/00new/PropClust/libs ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (PropClust)