* installing *source* package ‘OptOR’ ... ** this is package ‘OptOR’ version ‘0.1.0’ ** package ‘OptOR’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘gcc (GCC) 16.2.1 20260819 (Red Hat 16.2.1-2)’ make[1]: Entering directory '/data/localhost/ripley/R/packages/tests-devel/OptOR/src' gcc -I"/data/localhost/ripley/R/R-devel/include" -DNDEBUG -DOPTOR_WITH_R -I/usr/local/include -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c CR_memory_conversions.c -o CR_memory_conversions.o gcc -I"/data/localhost/ripley/R/R-devel/include" -DNDEBUG -DOPTOR_WITH_R -I/usr/local/include -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c array.c -o array.o gcc -I"/data/localhost/ripley/R/R-devel/include" -DNDEBUG -DOPTOR_WITH_R -I/usr/local/include -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c calc_X.c -o calc_X.o gcc -I"/data/localhost/ripley/R/R-devel/include" -DNDEBUG -DOPTOR_WITH_R -I/usr/local/include -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c calc_X_wrapperR.c -o calc_X_wrapperR.o gcc -I"/data/localhost/ripley/R/R-devel/include" -DNDEBUG -DOPTOR_WITH_R -I/usr/local/include -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c calc_inv.c -o calc_inv.o gcc -I"/data/localhost/ripley/R/R-devel/include" -DNDEBUG -DOPTOR_WITH_R -I/usr/local/include -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c classify_grid.c -o classify_grid.o gcc -I"/data/localhost/ripley/R/R-devel/include" -DNDEBUG -DOPTOR_WITH_R -I/usr/local/include -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c constraint.c -o constraint.o gcc -I"/data/localhost/ripley/R/R-devel/include" -DNDEBUG -DOPTOR_WITH_R -I/usr/local/include -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c cont_hr.c -o cont_hr.o gcc -I"/data/localhost/ripley/R/R-devel/include" -DNDEBUG -DOPTOR_WITH_R -I/usr/local/include -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c cont_hr_expansion.c -o cont_hr_expansion.o gcc -I"/data/localhost/ripley/R/R-devel/include" -DNDEBUG -DOPTOR_WITH_R -I/usr/local/include -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c cont_submatrix.c -o cont_submatrix.o gcc -I"/data/localhost/ripley/R/R-devel/include" -DNDEBUG -DOPTOR_WITH_R -I/usr/local/include -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c debug.c -o debug.o gcc -I"/data/localhost/ripley/R/R-devel/include" -DNDEBUG -DOPTOR_WITH_R -I/usr/local/include -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c find_best_corner.c -o find_best_corner.o gcc -I"/data/localhost/ripley/R/R-devel/include" -DNDEBUG -DOPTOR_WITH_R -I/usr/local/include -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c find_extrema.c -o find_extrema.o gcc -I"/data/localhost/ripley/R/R-devel/include" -DNDEBUG -DOPTOR_WITH_R -I/usr/local/include -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c find_extrema_wrapperR.c -o find_extrema_wrapperR.o gcc -I"/data/localhost/ripley/R/R-devel/include" -DNDEBUG -DOPTOR_WITH_R -I/usr/local/include -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c find_forced_coordinates.c -o find_forced_coordinates.o gcc -I"/data/localhost/ripley/R/R-devel/include" -DNDEBUG -DOPTOR_WITH_R -I/usr/local/include -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c find_max.c -o find_max.o gcc -I"/data/localhost/ripley/R/R-devel/include" -DNDEBUG -DOPTOR_WITH_R -I/usr/local/include -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c get_counting_matrix.c -o get_counting_matrix.o gcc -I"/data/localhost/ripley/R/R-devel/include" -DNDEBUG -DOPTOR_WITH_R -I/usr/local/include -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c get_optimal_rectangle.c -o get_optimal_rectangle.o gcc -I"/data/localhost/ripley/R/R-devel/include" -DNDEBUG -DOPTOR_WITH_R -I/usr/local/include -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c grid_cont_conversion.c -o grid_cont_conversion.o gcc -I"/data/localhost/ripley/R/R-devel/include" -DNDEBUG -DOPTOR_WITH_R -I/usr/local/include -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c grid_hr.c -o grid_hr.o gcc -I"/data/localhost/ripley/R/R-devel/include" -DNDEBUG -DOPTOR_WITH_R -I/usr/local/include -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c grid_matrix.c -o grid_matrix.o gcc -I"/data/localhost/ripley/R/R-devel/include" -DNDEBUG -DOPTOR_WITH_R -I/usr/local/include -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c init.c -o init.o gcc -I"/data/localhost/ripley/R/R-devel/include" -DNDEBUG -DOPTOR_WITH_R -I/usr/local/include -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c largest_rect_under_hist.c -o largest_rect_under_hist.o gcc -I"/data/localhost/ripley/R/R-devel/include" -DNDEBUG -DOPTOR_WITH_R -I/usr/local/include -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c linear_algebra.c -o linear_algebra.o gcc -I"/data/localhost/ripley/R/R-devel/include" -DNDEBUG -DOPTOR_WITH_R -I/usr/local/include -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c logging.c -o logging.o gcc -I"/data/localhost/ripley/R/R-devel/include" -DNDEBUG -DOPTOR_WITH_R -I/usr/local/include -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c optimal_cont_hr.c -o optimal_cont_hr.o gcc -I"/data/localhost/ripley/R/R-devel/include" -DNDEBUG -DOPTOR_WITH_R -I/usr/local/include -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c optimal_cont_hr_wrapperR.c -o optimal_cont_hr_wrapperR.o gcc -I"/data/localhost/ripley/R/R-devel/include" -DNDEBUG -DOPTOR_WITH_R -I/usr/local/include -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c optimal_grid_hr.c -o optimal_grid_hr.o gcc -I"/data/localhost/ripley/R/R-devel/include" -DNDEBUG -DOPTOR_WITH_R -I/usr/local/include -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c optimal_grid_hr_wrapperR.c -o optimal_grid_hr_wrapperR.o gcc -I"/data/localhost/ripley/R/R-devel/include" -DNDEBUG -DOPTOR_WITH_R -I/usr/local/include -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c qf_grid_decision.c -o qf_grid_decision.o gcc -I"/data/localhost/ripley/R/R-devel/include" -DNDEBUG -DOPTOR_WITH_R -I/usr/local/include -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c qf_max_result.c -o qf_max_result.o gcc -I"/data/localhost/ripley/R/R-devel/include" -DNDEBUG -DOPTOR_WITH_R -I/usr/local/include -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c qf_precomp_build.c -o qf_precomp_build.o gcc -I"/data/localhost/ripley/R/R-devel/include" -DNDEBUG -DOPTOR_WITH_R -I/usr/local/include -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c qf_precomp_free.c -o qf_precomp_free.o gcc -I"/data/localhost/ripley/R/R-devel/include" -DNDEBUG -DOPTOR_WITH_R -I/usr/local/include -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c qf_precomp_init.c -o qf_precomp_init.o gcc -I"/data/localhost/ripley/R/R-devel/include" -DNDEBUG -DOPTOR_WITH_R -I/usr/local/include -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c quadratic_forms.c -o quadratic_forms.o gcc -I"/data/localhost/ripley/R/R-devel/include" -DNDEBUG -DOPTOR_WITH_R -I/usr/local/include -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c rectangle.c -o rectangle.o gcc -I"/data/localhost/ripley/R/R-devel/include" -DNDEBUG -DOPTOR_WITH_R -I/usr/local/include -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c schur.c -o schur.o gcc -I"/data/localhost/ripley/R/R-devel/include" -DNDEBUG -DOPTOR_WITH_R -I/usr/local/include -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c set_corner.c -o set_corner.o gcc -I"/data/localhost/ripley/R/R-devel/include" -DNDEBUG -DOPTOR_WITH_R -I/usr/local/include -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c slice.c -o slice.o gcc -shared -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -fpic -L/usr/local/lib64 -o OptOR.so CR_memory_conversions.o array.o calc_X.o calc_X_wrapperR.o calc_inv.o classify_grid.o constraint.o cont_hr.o cont_hr_expansion.o cont_submatrix.o debug.o find_best_corner.o find_extrema.o find_extrema_wrapperR.o find_forced_coordinates.o find_max.o get_counting_matrix.o get_optimal_rectangle.o grid_cont_conversion.o grid_hr.o grid_matrix.o init.o largest_rect_under_hist.o linear_algebra.o logging.o optimal_cont_hr.o optimal_cont_hr_wrapperR.o optimal_grid_hr.o optimal_grid_hr_wrapperR.o qf_grid_decision.o qf_max_result.o qf_precomp_build.o qf_precomp_free.o qf_precomp_init.o quadratic_forms.o rectangle.o schur.o set_corner.o slice.o -fopenmp make[1]: Leaving directory '/data/localhost/ripley/R/packages/tests-devel/OptOR/src' make[1]: Entering directory '/data/localhost/ripley/R/packages/tests-devel/OptOR/src' make[1]: Leaving directory '/data/localhost/ripley/R/packages/tests-devel/OptOR/src' installing to /data/localhost/ripley/R/packages/tests-devel/OptOR.Rcheck/00LOCK-OptOR/00new/OptOR/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (OptOR)