* installing *source* package ‘NetMix’ ...
** package ‘NetMix’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C++ compiler: ‘g++-13 (GCC) 13.2.0’
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/NetMix/src'
g++-13 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/RcppArmadillo/include' -I/usr/local/include   -fopenmp -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection   -c AuxFuns.cpp -o AuxFuns.o
g++-13 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/RcppArmadillo/include' -I/usr/local/include   -fopenmp -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection   -c AuxFunsForR.cpp -o AuxFunsForR.o
g++-13 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/RcppArmadillo/include' -I/usr/local/include   -fopenmp -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection   -c MMModelClass.cpp -o MMModelClass.o
g++-13 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/RcppArmadillo/include' -I/usr/local/include   -fopenmp -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection   -c RcppExports.cpp -o RcppExports.o
MMModelClass.cpp: In member function 'void MMModel::optim_ours(bool)':
MMModelClass.cpp:440:30: warning: comparison of integer expressions of different signedness: 'arma::uword' {aka 'unsigned int'} and 'int' [-Wsign-compare]
  440 |     for(arma::uword i = 0; i < npar; ++i){
      |                            ~~^~~~~~
MMModelClass.cpp:461:30: warning: comparison of integer expressions of different signedness: 'arma::uword' {aka 'unsigned int'} and 'int' [-Wsign-compare]
  461 |     for(arma::uword i = 0; i < npar; ++i){
      |                            ~~^~~~~~
g++-13 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/RcppArmadillo/include' -I/usr/local/include   -fopenmp -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection   -c mmsbm_fit.cpp -o mmsbm_fit.o
mmsbm_fit.cpp: In function 'Rcpp::List mmsbm_fit(const arma::mat&, const arma::mat&, const arma::vec&, const arma::uvec&, const arma::uvec&, const arma::uvec&, const arma::umat&, const arma::field<arma::Col<unsigned int> >&, const arma::mat&, const arma::mat&, const arma::cube&, const arma::cube&, const arma::vec&, const arma::vec&, const arma::mat&, arma::mat&, arma::mat&, arma::cube&, arma::vec&, Rcpp::List&)':
mmsbm_fit.cpp:98:13: warning: variable 'oldLL' set but not used [-Wunused-but-set-variable]
   98 |      newLL, oldLL;
      |             ^~~~~
g++-13 -std=gnu++17 -shared -L/usr/local/gcc13/lib64 -L/usr/local/lib64 -o NetMix.so AuxFuns.o AuxFunsForR.o MMModelClass.o RcppExports.o mmsbm_fit.o -llapack -L/data/gannet/ripley/R/R-devel/lib -lRblas -lgfortran -lm -lquadmath -fopenmp
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/NetMix/src'
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/NetMix/src'
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/NetMix/src'
installing to /data/gannet/ripley/R/packages/tests-devel/NetMix.Rcheck/00LOCK-NetMix/00new/NetMix/libs
** R
** data
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (NetMix)