* installing *source* package ‘Libra’ ...
** this is package ‘Libra’ version ‘1.7’
** package ‘Libra’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C compiler: ‘gcc (GCC) 15.1.1 20250521 (Red Hat 15.1.1-2)’
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/Libra/src'
gcc -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG   -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes  -c LBLasso.c -o LBLasso.o
gcc -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG   -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes  -c LBheader.c -o LBheader.o
LBheader.c: In function ‘ising_grad’:
LBheader.c:51:3: warning: this ‘for’ clause does not guard... [-Wmisleading-indentation]
   51 |   for(int i=0;i<d;++i)
      |   ^~~
LBheader.c:57:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘for’
   57 |     gsl_blas_dgemm(CblasNoTrans,CblasNoTrans, 1, W_temp, X, 0, G);
      |     ^~~~~~~~~~~~~~
gcc -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG   -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes  -c LBlogistic.c -o LBlogistic.o
gcc -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG   -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes  -c LBmultilogistic.c -o LBmultilogistic.o
gcc -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG   -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes  -c Libra_init.c -o Libra_init.o
gcc -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG   -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes  -c ggm_C.c -o ggm_C.o
gcc -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG   -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes  -c ising_C.c -o ising_C.o
gcc -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG   -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes  -c potts_C.c -o potts_C.o
potts_C.c: In function ‘potts_C’:
potts_C.c:82:3: warning: this ‘for’ clause does not guard... [-Wmisleading-indentation]
   82 |   for (int i=0;i<nt;++i)
      |   ^~~
potts_C.c:85:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘for’
   85 |     double maxiter = (t_r[nt-1]-t_r[0])/alpha+1;
      |     ^~~~~~
gcc -shared -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -fpic -L/usr/local/lib64 -o Libra.so LBLasso.o LBheader.o LBlogistic.o LBmultilogistic.o Libra_init.o ggm_C.o ising_C.o potts_C.o -L/usr/local/lib -lgsl -lgslcblas
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/Libra/src'
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/Libra/src'
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/Libra/src'
installing to /data/gannet/ripley/R/packages/tests-devel/Libra.Rcheck/00LOCK-Libra/00new/Libra/libs
** R
** data
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (Libra)