* installing *source* package ‘IntegratedMRF’ ...
** package ‘IntegratedMRF’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C++ compiler: ‘g++-13 (GCC) 13.2.0’
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/IntegratedMRF/src'
g++-13 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c RcppExports.cpp -o RcppExports.o
g++-13 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c rcpp_hello.cpp -o rcpp_hello.o
g++-13 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c registerDynamicSymbol.cpp -o registerDynamicSymbol.o
rcpp_hello.cpp: In function 'Rcpp::List splitt(Rcpp::NumericMatrix, Rcpp::NumericMatrix, int, Rcpp::NumericVector, Rcpp::NumericMatrix, int, Rcpp::NumericVector)':
rcpp_hello.cpp:112:9: warning: this 'for' clause does not guard... [-Wmisleading-indentation]
112 | for (int i = 0; i<yhat_nrow; ++i)
| ^~~
rcpp_hello.cpp:118:11: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'for'
118 | for (int i = 0; i<yhat_nrow; ++i)
| ^~~
rcpp_hello.cpp:119:13: warning: this 'for' clause does not guard... [-Wmisleading-indentation]
119 | for (int j = 0; j<Inv_Cov_Y.ncol(); ++j)
| ^~~
rcpp_hello.cpp:125:15: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'for'
125 | NumericMatrix mult2(nrow,nrow);
| ^~~~~~~~~~~~~
rcpp_hello.cpp:130:9: warning: this 'for' clause does not guard... [-Wmisleading-indentation]
130 | for (int i = 0; i<r1; ++i)
| ^~~
rcpp_hello.cpp:136:11: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'for'
136 | for (int i = 0; i<r1; ++i)
| ^~~
rcpp_hello.cpp:137:13: warning: this 'for' clause does not guard... [-Wmisleading-indentation]
137 | for (int j = 0; j<c2; ++j)
| ^~~
rcpp_hello.cpp:143:15: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'for'
143 | for (int kk = 0; kk<nrow; kk++) {
| ^~~
rcpp_hello.cpp:179:9: warning: this 'for' clause does not guard... [-Wmisleading-indentation]
179 | for (int i = 0; i<yhat_nrow; ++i)
| ^~~
rcpp_hello.cpp:185:11: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'for'
185 | for (int i = 0; i<yhat_nrow; ++i)
| ^~~
rcpp_hello.cpp:186:13: warning: this 'for' clause does not guard... [-Wmisleading-indentation]
186 | for (int j = 0; j<Inv_Cov_Y.ncol(); ++j)
| ^~~
rcpp_hello.cpp:192:15: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'for'
192 | NumericMatrix mult2(nrow,nrow);
| ^~~~~~~~~~~~~
rcpp_hello.cpp:197:9: warning: this 'for' clause does not guard... [-Wmisleading-indentation]
197 | for (int i = 0; i<r1; ++i)
| ^~~
rcpp_hello.cpp:203:11: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'for'
203 | for (int i = 0; i<r1; ++i)
| ^~~
rcpp_hello.cpp:204:13: warning: this 'for' clause does not guard... [-Wmisleading-indentation]
204 | for (int j = 0; j<c2; ++j)
| ^~~
rcpp_hello.cpp:210:15: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'for'
210 | for (int kk = 0; kk<nrow; kk++) {
| ^~~
rcpp_hello.cpp: In function 'double Node_cost(Rcpp::NumericMatrix, Rcpp::NumericMatrix, int)':
rcpp_hello.cpp:305:5: warning: this 'for' clause does not guard... [-Wmisleading-indentation]
305 | for(int i=0; i<yhat_nrow; ++i)
| ^~~
rcpp_hello.cpp:311:7: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'for'
311 | for(int i=0; i<yhat_nrow; ++i)
| ^~~
rcpp_hello.cpp:312:9: warning: this 'for' clause does not guard... [-Wmisleading-indentation]
312 | for(int j=0; j<Inv_Cov_Y.ncol(); ++j)
| ^~~
rcpp_hello.cpp:318:11: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'for'
318 | NumericMatrix mult2(nrow,nrow);
| ^~~~~~~~~~~~~
rcpp_hello.cpp:323:5: warning: this 'for' clause does not guard... [-Wmisleading-indentation]
323 | for(int i=0; i<r1; ++i)
| ^~~
rcpp_hello.cpp:329:7: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'for'
329 | for(int i=0; i<r1; ++i)
| ^~~
rcpp_hello.cpp:330:9: warning: this 'for' clause does not guard... [-Wmisleading-indentation]
330 | for(int j=0; j<c2; ++j)
| ^~~
rcpp_hello.cpp:336:11: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'for'
336 | for(int kk=0; kk<nrow; kk++){
| ^~~
g++-13 -std=gnu++17 -shared -L/usr/local/gcc13/lib64 -L/usr/local/lib64 -L/usr/local/clang18/lib/x86_64-unknown-linux-gnu -o IntegratedMRF.so RcppExports.o rcpp_hello.o registerDynamicSymbol.o
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/IntegratedMRF/src'
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/IntegratedMRF/src'
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/IntegratedMRF/src'
installing to /data/gannet/ripley/R/packages/tests-devel/IntegratedMRF.Rcheck/00LOCK-IntegratedMRF/00new/IntegratedMRF/libs
** R
** data
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (IntegratedMRF)