* installing *source* package ‘IRTM’ ...
** this is package ‘IRTM’ version ‘0.0.1.1’
** package ‘IRTM’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C++ compiler: ‘g++ (GCC) 15.1.1 20250521 (Red Hat 15.1.1-2)’
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/IRTM/src'
g++ -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/RcppArmadillo/include' -I'/data/gannet/ripley/R/test-dev/RcppDist/include' -I'/data/gannet/ripley/R/test-dev/RcppProgress/include' -I/usr/local/include   -fopenmp -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection   -c RcppExports.cpp -o RcppExports.o
g++ -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/RcppArmadillo/include' -I'/data/gannet/ripley/R/test-dev/RcppDist/include' -I'/data/gannet/ripley/R/test-dev/RcppProgress/include' -I/usr/local/include   -fopenmp -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection   -c sampler.cpp -o sampler.o
g++ -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/RcppArmadillo/include' -I'/data/gannet/ripley/R/test-dev/RcppDist/include' -I'/data/gannet/ripley/R/test-dev/RcppProgress/include' -I/usr/local/include   -fopenmp -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection   -c tmvrnorm.cpp -o tmvrnorm.o
sampler.cpp: In function ‘void update_Sigma(arma::mat&, const int&, const int&, const arma::mat&, const arma::mat&)’:
sampler.cpp:101:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const unsigned int’} [-Wsign-compare]
  101 |   for (int j = 0; j < Sigma.n_cols; j++){
      |                   ~~^~~~~~~~~~~~~~
sampler.cpp: In function ‘void update_Omega(arma::mat&, const int&, const int&, const arma::mat&, const arma::mat&)’:
sampler.cpp:114:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const unsigned int’} [-Wsign-compare]
  114 |   for (int j = 0; j < Omega.n_cols; j++){
      |                   ~~^~~~~~~~~~~~~~
g++ -std=gnu++17 -shared -L/usr/local/lib64 -o IRTM.so RcppExports.o sampler.o tmvrnorm.o -fopenmp -llapack -L/data/gannet/ripley/R/R-devel/lib -lRblas -lgfortran -lm -lquadmath
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/IRTM/src'
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/IRTM/src'
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/IRTM/src'
installing to /data/gannet/ripley/R/packages/tests-devel/IRTM.Rcheck/00LOCK-IRTM/00new/IRTM/libs
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
*** copying figures
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (IRTM)