* installing *source* package ‘FactorCopulaModel’ ...
** this is package ‘FactorCopulaModel’ version ‘0.1.0’
** package ‘FactorCopulaModel’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C compiler: ‘gcc (GCC) 15.1.1 20250521 (Red Hat 15.1.1-2)’
using Fortran compiler: ‘GNU Fortran (GCC) 15.1.1 20250521 (Red Hat 15.1.1-2)’
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/FactorCopulaModel/src'
gfortran -fpic -g -O2 -mtune=native -Wall -pedantic -c 2derivs.f90 -o 2derivs.o
gfortran -fpic -g -O2 -mtune=native -Wall -pedantic -c Rnllkderiv.f90 -o Rnllkderiv.o
gfortran -fpic -g -O2 -mtune=native -Wall -pedantic -c Rproxyft.f90 -o Rproxyft.o
gfortran -fpic -g -O2 -mtune=native -Wall -pedantic -c bb1-1f1t.f90 -o bb1-1f1t.o
gfortran -fpic -g -O2 -mtune=native -Wall -pedantic -c bb1facts.f90 -o bb1facts.o
gfortran -fpic -g -O2 -mtune=native -Wall -pedantic -c bb1frkbifact.f90 -o bb1frkbifact.o
gfortran -fpic -g -O2 -mtune=native -Wall -pedantic -c bb1gumbifact.f90 -o bb1gumbifact.o
gfortran -fpic -g -O2 -mtune=native -Wall -pedantic -c bifact_all_fam.f90 -o bifact_all_fam.o
gfortran -fpic -g -O2 -mtune=native -Wall -pedantic -c bifact_frk.f90 -o bifact_frk.o
gfortran -fpic -g -O2 -mtune=native -Wall -pedantic -c bifact_gumbel.f90 -o bifact_gumbel.o
gfortran -fpic -g -O2 -mtune=native -Wall -pedantic -c bifact_latupdate.f90 -o bifact_latupdate.o
gfortran -fpic -g -O2 -mtune=native -Wall -pedantic -c bifact_latupdate3.f90 -o bifact_latupdate3.o
gfortran -fpic -g -O2 -mtune=native -Wall -pedantic -c bifct_proxynllk.f90 -o bifct_proxynllk.o
gfortran -fpic -g -O2 -mtune=native -Wall -pedantic -c ccopderiv.f90 -o ccopderiv.o
gfortran -fpic -g -O2 -mtune=native -Wall -pedantic -c cop12factlik.f90 -o cop12factlik.o
gcc -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c factcopula_init.c -o factcopula_init.o
gfortran -fpic -g -O2 -mtune=native -Wall -pedantic -c frk12fact-lpdf.f90 -o frk12fact-lpdf.o
gfortran -fpic -g -O2 -mtune=native -Wall -pedantic -c frkbb1nestfact.f90 -o frkbb1nestfact.o
gfortran -fpic -g -O2 -mtune=native -Wall -pedantic -c frkbifact.f90 -o frkbifact.o
gfortran -fpic -g -O2 -mtune=native -Wall -pedantic -c frkgumnestfact.f90 -o frkgumnestfact.o
gfortran -fpic -g -O2 -mtune=native -Wall -pedantic -c frknestfact.f90 -o frknestfact.o
gcc -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c gauleg.c -o gauleg.o
gfortran -fpic -g -O2 -mtune=native -Wall -pedantic -c gum12fact.f90 -o gum12fact.o
gfortran -fpic -g -O2 -mtune=native -Wall -pedantic -c gumbb1nestfact.f90 -o gumbb1nestfact.o
gfortran -fpic -g -O2 -mtune=native -Wall -pedantic -c gumbifact.f90 -o gumbifact.o
gfortran -fpic -g -O2 -mtune=native -Wall -pedantic -c gumfrkbifact.f90 -o gumfrkbifact.o
gfortran -fpic -g -O2 -mtune=native -Wall -pedantic -c gumnestfact.f90 -o gumnestfact.o
gfortran -fpic -g -O2 -mtune=native -Wall -pedantic -c latupdate.f90 -o latupdate.o
gfortran -fpic -g -O2 -mtune=native -Wall -pedantic -c latupdate2.f90 -o latupdate2.o
gcc -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c lgamma.c -o lgamma.o
gfortran -fpic -g -O2 -mtune=native -Wall -pedantic -c lsolve.f90 -o lsolve.o
gfortran -fpic -g -O2 -mtune=native -Wall -pedantic -c mvtfactwithgrad.f90 -o mvtfactwithgrad.o
gfortran -fpic -g -O2 -mtune=native -Wall -pedantic -c oblique_factor.f90 -o oblique_factor.o
gfortran -fpic -g -O2 -mtune=native -Wall -pedantic -c oblique_factor_2.f90 -o oblique_factor_2.o
mvtfactwithgrad.f90:273:18:
273 | subroutine intpr(message, msg_len, int_val, int_val_len)
| 1~~~~~~
Warning: Unused dummy argument ‘message’ at (1) [-Wunused-dummy-argument]
mvtfactwithgrad.f90:273:27:
273 | subroutine intpr(message, msg_len, int_val, int_val_len)
| 1~~~~~~
Warning: Unused dummy argument ‘msg_len’ at (1) [-Wunused-dummy-argument]
gfortran -fpic -g -O2 -mtune=native -Wall -pedantic -c onefact.f90 -o onefact.o
lsolve.f90:88:5:
88 | if(abs(aa(n,n))<=tol) then
| ^
Warning: ‘MEM <real(kind=8)[0:]> [(real(kind=8)[0:] *)_28][_161]’ may be used uninitialized [-Wmaybe-uninitialized]
Rproxyft.f90:197:25:
197 | nllk=nllk-log(fval);
| ^
Warning: ‘fval’ may be used uninitialized [-Wmaybe-uninitialized]
Rproxyft.f90:93:20:
93 | double precision fval,ljpdf,tmat(2,2)
| ^~~~
note: ‘fval’ was declared here
gfortran -fpic -g -O2 -mtune=native -Wall -pedantic -c otherfns.f90 -o otherfns.o
gfortran -fpic -g -O2 -mtune=native -Wall -pedantic -c pnorm.f90 -o pnorm.o
gcc -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c ptbeta.c -o ptbeta.o
gfortran -fpic -g -O2 -mtune=native -Wall -pedantic -c qtnorm.f90 -o qtnorm.o
gfortran -fpic -g -O2 -mtune=native -Wall -pedantic -c t12fact.f90 -o t12fact.o
gfortran -fpic -g -O2 -mtune=native -Wall -pedantic -c tbb1nestfact.f90 -o tbb1nestfact.o
gfortran -fpic -g -O2 -mtune=native -Wall -pedantic -c tbifact.f90 -o tbifact.o
gfortran -fpic -g -O2 -mtune=native -Wall -pedantic -c tnestfact.f90 -o tnestfact.o
gfortran -fpic -g -O2 -mtune=native -Wall -pedantic -c univariate.f90 -o univariate.o
gcc -shared -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -fpic -L/usr/local/lib64 -o FactorCopulaModel.so 2derivs.o Rnllkderiv.o Rproxyft.o bb1-1f1t.o bb1facts.o bb1frkbifact.o bb1gumbifact.o bifact_all_fam.o bifact_frk.o bifact_gumbel.o bifact_latupdate.o bifact_latupdate3.o bifct_proxynllk.o ccopderiv.o cop12factlik.o factcopula_init.o frk12fact-lpdf.o frkbb1nestfact.o frkbifact.o frkgumnestfact.o frknestfact.o gauleg.o gum12fact.o gumbb1nestfact.o gumbifact.o gumfrkbifact.o gumnestfact.o latupdate.o latupdate2.o lgamma.o lsolve.o mvtfactwithgrad.o oblique_factor.o oblique_factor_2.o onefact.o otherfns.o pnorm.o ptbeta.o qtnorm.o t12fact.o tbb1nestfact.o tbifact.o tnestfact.o univariate.o -lgfortran -lm -lquadmath
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/FactorCopulaModel/src'
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/FactorCopulaModel/src'
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/FactorCopulaModel/src'
installing to /data/gannet/ripley/R/packages/tests-devel/FactorCopulaModel.Rcheck/00LOCK-FactorCopulaModel/00new/FactorCopulaModel/libs
** R
** data
*** moving datasets to lazyload DB
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (FactorCopulaModel)