* installing *source* package ‘FRESA.CAD’ ...
** this is package ‘FRESA.CAD’ version ‘3.4.8’
** package ‘FRESA.CAD’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C++ compiler: ‘g++ (GCC) 16.1.1 20260515 (Red Hat 16.1.1-2)’
make[1]: Entering directory '/data/localhost/ripley/R/packages/tests-devel/FRESA.CAD/src'
g++ -std=gnu++20 -I"/data/localhost/ripley/R/R-devel/include" -DNDEBUG  -I'/data/localhost/ripley/R/test-dev/Rcpp/include' -I'/data/localhost/ripley/R/test-dev/RcppArmadillo/include' -I/usr/local/include   -fopenmp -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection   -c FRESACAD_init.cpp -o FRESACAD_init.o
g++ -std=gnu++20 -I"/data/localhost/ripley/R/R-devel/include" -DNDEBUG  -I'/data/localhost/ripley/R/test-dev/Rcpp/include' -I'/data/localhost/ripley/R/test-dev/RcppArmadillo/include' -I/usr/local/include   -fopenmp -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection   -c FRESAcommons.cpp -o FRESAcommons.o
g++ -std=gnu++20 -I"/data/localhost/ripley/R/R-devel/include" -DNDEBUG  -I'/data/localhost/ripley/R/test-dev/Rcpp/include' -I'/data/localhost/ripley/R/test-dev/RcppArmadillo/include' -I/usr/local/include   -fopenmp -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection   -c binaryFeatureSelectionCpp.cpp -o binaryFeatureSelectionCpp.o
g++ -std=gnu++20 -I"/data/localhost/ripley/R/R-devel/include" -DNDEBUG  -I'/data/localhost/ripley/R/test-dev/Rcpp/include' -I'/data/localhost/ripley/R/test-dev/RcppArmadillo/include' -I/usr/local/include   -fopenmp -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection   -c rankInverseNormalCpp.cpp -o rankInverseNormalCpp.o
g++ -std=gnu++20 -I"/data/localhost/ripley/R/R-devel/include" -DNDEBUG  -I'/data/localhost/ripley/R/test-dev/Rcpp/include' -I'/data/localhost/ripley/R/test-dev/RcppArmadillo/include' -I/usr/local/include   -fopenmp -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection   -c regresionFeatureSelectionCpp.cpp -o regresionFeatureSelectionCpp.o
FRESAcommons.cpp: In function ‘arma::vec coxfit(int, const arma::vec&, const arma::vec&, arma::mat&, const arma::vec&, const arma::vec&, arma::vec&, int, double, double, arma::vec&, int)’:
FRESAcommons.cpp:441:13: warning: variable ‘nrisk’ set but not used [-Wunused-but-set-variable=]
  441 |     int     nrisk;
      |             ^~~~~
binaryFeatureSelectionCpp.cpp: In function ‘std::string binaryFowardSelection(unsigned int, int, double, const std::string&, int, const std::string&, const std::string&, const std::string&, unsigned int, const arma::mat&, const arma::mat&, const std::vector<std::__cxx11::basic_string<char> >&, std::map<std::__cxx11::basic_string<char>, int>&, const std::string&, std::vector<int, std::allocator<int> >&, const std::vector<std::__cxx11::basic_string<char> >&, arma::vec&, bool, unsigned int, arma::vec&)’:
binaryFeatureSelectionCpp.cpp:557:21: warning: variable ‘nfors’ set but not used [-Wunused-but-set-variable=]
  557 |                 int nfors = 0;
      |                     ^~~~~
g++ -std=gnu++20 -shared -L/usr/local/lib64 -o FRESA.CAD.so FRESACAD_init.o FRESAcommons.o binaryFeatureSelectionCpp.o rankInverseNormalCpp.o regresionFeatureSelectionCpp.o -llapack -L/data/localhost/ripley/R/R-devel/lib -lRblas -lgfortran -lm -latomic_asneeded -lquadmath -fopenmp
make[1]: Leaving directory '/data/localhost/ripley/R/packages/tests-devel/FRESA.CAD/src'
make[1]: Entering directory '/data/localhost/ripley/R/packages/tests-devel/FRESA.CAD/src'
make[1]: Leaving directory '/data/localhost/ripley/R/packages/tests-devel/FRESA.CAD/src'
installing to /data/localhost/ripley/R/packages/tests-devel/FRESA.CAD.Rcheck/00LOCK-FRESA.CAD/00new/FRESA.CAD/libs
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (FRESA.CAD)